FFCP PHASE1:Hg19::chr6:104488660..104488663,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:104488660..104488663,- | |||
|coexpression_cluster_id=C15 | |coexpression_cluster_id=C15 | ||
|description=CAGE_peak_at_chr6:104488660..104488663,- | |description=CAGE_peak_at_chr6:104488660..104488663,- | ||
|id=chr6:104488660..104488663,- | |id=chr6:104488660..104488663,- | ||
|ontology_enrichment_celltype=CL:0000946!2.80e-07!1;CL:0000786!2.80e-07!1;CL:0000980!2.80e-07!1 | |ontology_enrichment_celltype=CL:0000946!2.80e-07!1;CL:0000786!2.80e-07!1;CL:0000980!2.80e-07!1 | ||
|ontology_enrichment_celltype_v019=CL:0000047;5.69e-21;2!CL:0000235;5.92e-08;6!CL:0000540;6.78e-08;6!CL:0000404;6.78e-08;6!CL:0002319;7.45e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,1.10e-20,8;CL:0000235,5.92e-08,6;CL:0000540,6.34e-08,6;CL:0000031,6.34e-08,6;CL:0000404,6.34e-08,6;CL:0002319,7.45e-07,25 | |||
|ontology_enrichment_development_v019=UBERON:0005425;2.21e-40;1!UBERON:0003056;1.83e-14;3!CL:0000031;6.78e-08;6 | |||
|ontology_enrichment_disease=DOID:3112!2.17e-07!1 | |ontology_enrichment_disease=DOID:3112!2.17e-07!1 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003714!3.08e-14!2;UBERON:0000941!5.22e-08!1;UBERON:0004904!5.22e-08!1;UBERON:0002464!5.22e-08!1;UBERON:0001021!5.22e-08!1;UBERON:0001785!5.22e-08!1;UBERON:0002146!7.76e-08!1;UBERON:0005623!7.76e-08!1;UBERON:0002171!8.84e-08!1;UBERON:0006518!8.84e-08!1;UBERON:0008949!8.84e-08!1;UBERON:0000101!8.84e-08!1;UBERON:0002167!8.84e-08!1 | |ontology_enrichment_uberon=UBERON:0003714!3.08e-14!2;UBERON:0000941!5.22e-08!1;UBERON:0004904!5.22e-08!1;UBERON:0002464!5.22e-08!1;UBERON:0001021!5.22e-08!1;UBERON:0001785!5.22e-08!1;UBERON:0002146!7.76e-08!1;UBERON:0005623!7.76e-08!1;UBERON:0002171!8.84e-08!1;UBERON:0006518!8.84e-08!1;UBERON:0008949!8.84e-08!1;UBERON:0000101!8.84e-08!1;UBERON:0002167!8.84e-08!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0000941;2.21e-40;1!UBERON:0001785;2.21e-40;1!UBERON:0002464;2.21e-40;1!UBERON:0004904;2.21e-40;1!UBERON:0001021;2.21e-40;1!UBERON:0003714;5.69e-21;2!UBERON:0005162;5.69e-21;2!UBERON:0000122;5.69e-21;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,2.21e-40,1;UBERON:0001785,2.21e-40,1;UBERON:0002464,2.21e-40,1;UBERON:0004904,2.21e-40,1;UBERON:0001021,2.21e-40,1;UBERON:0003902,2.21e-40,1;UBERON:0005425,2.21e-40,1;UBERON:0003714,5.70e-21,2;UBERON:0005162,5.70e-21,2;UBERON:0000122,5.70e-21,2;UBERON:0001781,3.42e-11,4;UBERON:0000966,6.78e-08,6;UBERON:0005388,6.78e-08,6;UBERON:0001802,6.78e-08,6 | |||
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|short_description=p@chr6:104488660..104488663,- | |short_description=p@chr6:104488660..104488663,- | ||
}} | }} |
Latest revision as of 17:49, 30 July 2015
Short description: | p@chr6:104488660..104488663, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:104488660..104488663, - |
Coexpression cluster: | C15_anaplastic_small_skeletal_neuroblastoma_parietal_temporal_tongue |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 1.10e-20 | 8 |
macrophage | 5.92e-08 | 6 |
neuron | 6.34e-08 | 6 |
neuroblast | 6.34e-08 | 6 |
electrically signaling cell | 6.34e-08 | 6 |
neural cell | 7.45e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 2.21e-40 | 1 |
cranial nerve | 2.21e-40 | 1 |
nerve trunk | 2.21e-40 | 1 |
nerve connecting eye with brain | 2.21e-40 | 1 |
nerve | 2.21e-40 | 1 |
retinal neural layer | 2.21e-40 | 1 |
presumptive neural retina | 2.21e-40 | 1 |
neural tissue | 5.70e-21 | 2 |
multi cell component structure | 5.70e-21 | 2 |
neuron projection bundle | 5.70e-21 | 2 |
layer of retina | 3.42e-11 | 4 |
retina | 6.78e-08 | 6 |
photoreceptor array | 6.78e-08 | 6 |
posterior segment of eyeball | 6.78e-08 | 6 |