FFCP PHASE1:Hg19::chr6:112803862..112803893,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:112803862..112803893,+ | |||
|coexpression_cluster_id=C16 | |coexpression_cluster_id=C16 | ||
|description=CAGE_peak_at_chr6:112803862..112803893,+ | |description=CAGE_peak_at_chr6:112803862..112803893,+ | ||
|id=chr6:112803862..112803893,+ | |id=chr6:112803862..112803893,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002097;1.07e-13;2!CL:0000174;1.41e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002097,1.37e-13,2;CL:0000174,1.67e-09,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001950!1.90e-51!20;UBERON:0002619!8.46e-47!22;UBERON:0000956!3.63e-41!25;UBERON:0000203!3.63e-41!25;UBERON:0001869!1.67e-37!32;UBERON:0002791!2.46e-36!33;UBERON:0002020!3.12e-35!34;UBERON:0003528!3.12e-35!34;UBERON:0001893!3.12e-35!34;UBERON:0002780!1.18e-33!41;UBERON:0001890!1.18e-33!41;UBERON:0006240!1.18e-33!41;UBERON:0000200!5.48e-33!6;UBERON:0003080!8.16e-33!42;UBERON:0002771!1.11e-24!3;UBERON:0001049!1.12e-23!57;UBERON:0005068!1.12e-23!57;UBERON:0006241!1.12e-23!57;UBERON:0007135!1.12e-23!57;UBERON:0002616!8.39e-23!59;UBERON:0003056!5.51e-22!61;UBERON:0000955!7.10e-19!69;UBERON:0006238!7.10e-19!69;UBERON:0003075!2.41e-17!86;UBERON:0007284!2.41e-17!86;UBERON:0001870!1.08e-16!2;UBERON:0002346!1.85e-16!90;UBERON:0001871!4.03e-16!7;UBERON:0001017!1.47e-15!82;UBERON:0005743!9.82e-15!86;UBERON:0002021!1.33e-14!5;UBERON:0000073!3.96e-13!94;UBERON:0001016!3.96e-13!94;UBERON:0007023!1.95e-12!115;UBERON:0000033!3.21e-11!123;UBERON:0000153!1.40e-10!129;UBERON:0007811!1.40e-10!129;UBERON:0002702!1.74e-09!1;UBERON:0003112!3.05e-09!1;UBERON:0000032!3.05e-09!1;UBERON:0005253!3.05e-09!1;UBERON:0003128!3.05e-09!1;UBERON:0002241!3.05e-09!1;UBERON:0001703!3.05e-09!1;UBERON:0004761!3.05e-09!1;UBERON:0009617!3.05e-09!1;UBERON:0002022!3.31e-09!1;UBERON:0002581!5.75e-09!1;UBERON:0002902!6.72e-09!1;UBERON:0009899!6.72e-09!1;UBERON:0001882!9.17e-09!1;UBERON:0005403!9.17e-09!1;UBERON:0004121!2.10e-07!169;UBERON:0000025!3.37e-07!194;UBERON:0000924!3.57e-07!173;UBERON:0006601!3.57e-07!173;UBERON:0001872!3.68e-07!5 | |ontology_enrichment_uberon=UBERON:0001950!1.90e-51!20;UBERON:0002619!8.46e-47!22;UBERON:0000956!3.63e-41!25;UBERON:0000203!3.63e-41!25;UBERON:0001869!1.67e-37!32;UBERON:0002791!2.46e-36!33;UBERON:0002020!3.12e-35!34;UBERON:0003528!3.12e-35!34;UBERON:0001893!3.12e-35!34;UBERON:0002780!1.18e-33!41;UBERON:0001890!1.18e-33!41;UBERON:0006240!1.18e-33!41;UBERON:0000200!5.48e-33!6;UBERON:0003080!8.16e-33!42;UBERON:0002771!1.11e-24!3;UBERON:0001049!1.12e-23!57;UBERON:0005068!1.12e-23!57;UBERON:0006241!1.12e-23!57;UBERON:0007135!1.12e-23!57;UBERON:0002616!8.39e-23!59;UBERON:0003056!5.51e-22!61;UBERON:0000955!7.10e-19!69;UBERON:0006238!7.10e-19!69;UBERON:0003075!2.41e-17!86;UBERON:0007284!2.41e-17!86;UBERON:0001870!1.08e-16!2;UBERON:0002346!1.85e-16!90;UBERON:0001871!4.03e-16!7;UBERON:0001017!1.47e-15!82;UBERON:0005743!9.82e-15!86;UBERON:0002021!1.33e-14!5;UBERON:0000073!3.96e-13!94;UBERON:0001016!3.96e-13!94;UBERON:0007023!1.95e-12!115;UBERON:0000033!3.21e-11!123;UBERON:0000153!1.40e-10!129;UBERON:0007811!1.40e-10!129;UBERON:0002702!1.74e-09!1;UBERON:0003112!3.05e-09!1;UBERON:0000032!3.05e-09!1;UBERON:0005253!3.05e-09!1;UBERON:0003128!3.05e-09!1;UBERON:0002241!3.05e-09!1;UBERON:0001703!3.05e-09!1;UBERON:0004761!3.05e-09!1;UBERON:0009617!3.05e-09!1;UBERON:0002022!3.31e-09!1;UBERON:0002581!5.75e-09!1;UBERON:0002902!6.72e-09!1;UBERON:0009899!6.72e-09!1;UBERON:0001882!9.17e-09!1;UBERON:0005403!9.17e-09!1;UBERON:0004121!2.10e-07!169;UBERON:0000025!3.37e-07!194;UBERON:0000924!3.57e-07!173;UBERON:0006601!3.57e-07!173;UBERON:0001872!3.68e-07!5 | ||
|ontology_enrichment_uberon_v019=UBERON:0000200;5.11e-66;6!UBERON:0002771;1.88e-50;2!UBERON:0002702;5.14e-50;2!UBERON:0001950;2.48e-42;20!UBERON:0002619;1.10e-38;22!UBERON:0000956;2.90e-34;25!UBERON:0000203;2.90e-34;25!UBERON:0001870;9.09e-34;3!UBERON:0003528;8.11e-23;34!UBERON:0002020;8.11e-23;34!UBERON:0002791;1.19e-22;32!UBERON:0001869;1.19e-22;32!UBERON:0001893;6.12e-22;34!UBERON:0001871;3.06e-15;6!UBERON:0002780;3.44e-12;41!UBERON:0001890;3.44e-12;41!UBERON:0000073;3.66e-11;53!UBERON:0002616;3.66e-11;53!UBERON:0002369;1.41e-09;3!UBERON:0001235;1.41e-09;3!UBERON:0006858;1.41e-09;3!UBERON:0001017;1.05e-08;75!UBERON:0000955;9.39e-08;68!UBERON:0001052;1.69e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000200,5.13e-66,6;UBERON:0002771,1.88e-50,2;UBERON:0002702,5.15e-50,2;UBERON:0001950,2.48e-42,20;UBERON:0002619,1.10e-38,22;UBERON:0000956,2.91e-34,25;UBERON:0000203,2.91e-34,25;UBERON:0001870,9.10e-34,3;UBERON:0002791,4.59e-27,32;UBERON:0001869,4.59e-27,32;UBERON:0003528,1.56e-25,34;UBERON:0002020,1.56e-25,34;UBERON:0001893,1.56e-25,34;UBERON:0002780,2.54e-21,41;UBERON:0001890,2.54e-21,41;UBERON:0003080,2.54e-21,41;UBERON:0006240,2.54e-21,41;UBERON:0000073,1.25e-16,53;UBERON:0002616,1.25e-16,53;UBERON:0001049,9.14e-16,56;UBERON:0005068,9.14e-16,56;UBERON:0006241,9.14e-16,56;UBERON:0007135,9.14e-16,56;UBERON:0001871,3.06e-15,6;UBERON:0003056,1.66e-14,61;UBERON:0000955,7.28e-13,68;UBERON:0006238,7.28e-13,68;UBERON:0001017,7.27e-11,81;UBERON:0003075,7.27e-11,82;UBERON:0007284,7.27e-11,82;UBERON:0002346,2.28e-10,86;UBERON:0001016,8.28e-10,89;UBERON:0002369,1.67e-09,3;UBERON:0001235,1.67e-09,3;UBERON:0006858,1.67e-09,3;UBERON:0010314,3.95e-09,132;UBERON:0010371,1.34e-08,104;UBERON:0001052,1.49e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411167888021826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399891964728228,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316553979779393,0,0,0,0,0,0.114536596165916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.607495566580247,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77213635993397,2.80660409274515,1.251909307065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147855149989634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28664954824955,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52084279766904,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,1.59633859057151,0.41023272848151,0,0.276629009856872,0.807378228159255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44680757550829,0,0,0,0,0,0,0,0,0,0.227662191351298,0,0,0,0,0.328863867814245,0,0,0,0,1.68163297988273,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.407948941145488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411167888021826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399891964728228,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316553979779393,0,0,0,0,0,0.114536596165916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.607495566580247,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77213635993397,2.80660409274515,1.251909307065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147855149989634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28664954824955,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52084279766904,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,1.59633859057151,0.41023272848151,0,0.276629009856872,0.807378228159255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44680757550829,0,0,0,0,0,0,0,0,0,0.227662191351298,0,0,0,0,0.328863867814245,0,0,0,0,1.68163297988273,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.407948941145488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr6:112803862..112803893,+ | |short_description=p@chr6:112803862..112803893,+ | ||
}} | }} |
Latest revision as of 18:26, 30 July 2015
Short description: | p@chr6:112803862..112803893, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:112803862..112803893, + |
Coexpression cluster: | C16_medial_amygdala_occipital_parietal_olfactory_putamen_brain |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cortical cell of adrenal gland | 1.37e-13 | 2 |
steroid hormone secreting cell | 1.67e-09 | 3 |