FFCP PHASE1:Hg19::chr6:31795013..31795063,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr6:31795013..31795063,- to FFCP PHASE1:Hg19::chr6:31795013..31795063,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr6:31795013..31795063,- | |||
|coexpression_cluster_id=C2784 | |||
|description=CAGE_peak_at_chr6:31795013..31795063,- | |||
|id=chr6:31795013..31795063,- | |||
|ontology_enrichment_celltype=CL:0000860!3.67e-16!45;CL:0002057!7.52e-16!42;CL:0000738!1.19e-13!140;CL:0002087!4.23e-12!119;CL:0002031!6.51e-12!124;CL:0000988!3.55e-11!182;CL:0000766!4.18e-11!76;CL:0000037!5.41e-11!172;CL:0000566!5.41e-11!172;CL:0002032!1.75e-10!165;CL:0000837!1.75e-10!165;CL:0000839!5.36e-10!70;CL:0000557!1.34e-09!71;CL:0002194!1.78e-09!63;CL:0000576!1.78e-09!63;CL:0000040!1.78e-09!63;CL:0000559!1.78e-09!63;CL:0002009!1.11e-08!65;CL:0000763!3.28e-07!112;CL:0000049!3.28e-07!112 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.05e-21;33!CL:0002057;3.05e-21;33!CL:0000473;6.89e-15;39!CL:0000234;6.89e-15;39!CL:0000576;5.04e-09;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,8.99e-17,42;CL:0002057,8.99e-17,42;CL:0000473,6.88e-14,48;CL:0000234,6.88e-14,48;CL:0000766,2.56e-12,72;CL:0000839,8.41e-12,66;CL:0000557,1.58e-11,67;CL:0002031,7.22e-11,120;CL:0000738,6.40e-10,136;CL:0002194,6.49e-10,59;CL:0000576,6.49e-10,59;CL:0000040,6.49e-10,59;CL:0000559,6.49e-10,59;CL:0002009,2.07e-09,61;CL:0002087,6.12e-09,115;CL:0002032,1.52e-07,161;CL:0000837,1.52e-07,161;CL:0000037,7.37e-07,168 | |||
|ontology_enrichment_development_v019=CL:0002057;3.17e-12;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.52e-25!115;UBERON:0001049!1.71e-15!57;UBERON:0005068!1.71e-15!57;UBERON:0006241!1.71e-15!57;UBERON:0007135!1.71e-15!57;UBERON:0002616!1.45e-13!59;UBERON:0002780!4.19e-13!41;UBERON:0001890!4.19e-13!41;UBERON:0006240!4.19e-13!41;UBERON:0003080!2.01e-12!42;UBERON:0001017!2.87e-12!82;UBERON:0000955!2.95e-12!69;UBERON:0006238!2.95e-12!69;UBERON:0005743!2.03e-11!86;UBERON:0003075!1.19e-10!86;UBERON:0007284!1.19e-10!86;UBERON:0002390!3.46e-10!102;UBERON:0003061!3.46e-10!102;UBERON:0002346!6.55e-10!90;UBERON:0001893!1.71e-09!34;UBERON:0002020!2.47e-09!34;UBERON:0003528!2.47e-09!34;UBERON:0002791!3.52e-09!33;UBERON:0000073!4.04e-09!94;UBERON:0001016!4.04e-09!94;UBERON:0002371!7.37e-09!80;UBERON:0002193!8.52e-09!112;UBERON:0001869!2.36e-08!32;UBERON:0001474!2.41e-08!86;UBERON:0003056!3.36e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0001894;2.96e-07;7!UBERON:0000073;7.76e-07;53!UBERON:0002616;7.76e-07;53!UBERON:0001896;8.17e-07;3!UBERON:0005290;8.17e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.48e-13,114;UBERON:0001049,2.61e-11,56;UBERON:0005068,2.61e-11,56;UBERON:0006241,2.61e-11,56;UBERON:0007135,2.61e-11,56;UBERON:0002371,2.46e-10,76;UBERON:0002405,6.93e-10,93;UBERON:0000073,1.08e-09,53;UBERON:0002616,1.08e-09,53;UBERON:0002390,1.11e-09,98;UBERON:0003061,1.11e-09,98;UBERON:0001474,4.28e-09,82;UBERON:0002193,7.11e-09,108;UBERON:0004765,1.02e-07,90;UBERON:0003075,1.63e-07,82;UBERON:0007284,1.63e-07,82;UBERON:0001894,3.28e-07,7;UBERON:0006222,3.28e-07,7;UBERON:0002780,4.05e-07,41;UBERON:0001890,4.05e-07,41;UBERON:0003080,4.05e-07,41;UBERON:0006240,4.05e-07,41;UBERON:0001434,5.43e-07,100;UBERON:0002346,6.71e-07,86 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0.218441372130172,0.263766978228454,0,0,0,0,0,0,0.123121058076788,0,0.626909442956176,0.85870796139317,0.410623275218653,0.125542639594803,0.534893840235659,0.410502947249729,0.787107813136792,0,0.383829398097213,0.309632246632152,0.919421224478927,0.30120591877825,0,0.0774672005803016,0.142169232487422,0.587200878669695,0,0,0.217010870715852,0,0,0.257575567634187,0.145398238779565,0.755751887377619,2.18325655069035,1.16214518452842,0.822335776043652,2.78735733805593,1.1507695692886,1.7931249457037,4.02019790810595,2.41321976515633,4.51839278508678,4.06279459783025,0.564727018627814,0.545812300115692,2.24723484445085,1.83650335422542,0.962787081228281,1.27867425159808,0.989553900560148,0.797854630486527,2.98357325372886,1.16083695451434,2.26954089876456,1.86846674698672,1.25624332628372,1.5644487552606,3.25783267057675,1.21079900526674,1.47311054395026,3.79754864929061,0.633765858935825,0.212604299965044,0.209658645508376,0.336985893439485,0.600707571366025,0.32145117339416,0.570025487482497,0,0.182664153764634,0,2.18455444504853,0.889509253863555,1.70692089026603,1.20118796110804,1.14950487990897,2.64417949113945,2.86216126360609,0.569212969109448,0,0,0,1.12101712596307,0,0,0,0,0,0.651844533267181,0,0,0.334231370655521,0.294605907474837,0.443067789167242,0,0.128091319725675,0.130059347559878,0.164437904603676,0,0,0.14828656316206,0.267540828089713,0,0.113309342697566,0.383220493601921,0,0.253019692019503,0,0,3.8018081777935,0.150575119077773,1.27986611154418,1.24930726552346,0,0.821127996921047,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0.283604451492204,0.221729397462564,0.087834785693126,1.17881167947941,0,0,0,0.174129737299267,0,0.476981248610684,0.571994910780128,0,0.198762407366705,0,0.347140501607594,0,0.419499436209906,0,0.208994966536811,0.258416759169329,0,0,0,0,0,0,0.81014194788176,0,0,0,1.53316637465883,0,0,1.31780417436063,0,0,0,0,0,0,0,0,1.06748995729705,0,0,0.269421344139376,0,0.302714855289863,0.576175924479999,0.234321431833797,0,0,0,0,0.161872944368132,0,0,0.245668634623536,0,0,0,0,0,0,0,0,0,0,0,0,0.358779271377724,0,0,0.300091096084402,0,0,0.18611685633159,0,0.0974370051611986,0,0,0,0,0.10075209822764,0.169560592310488,0,0.272746120590835,0,0.121973706129595,0.265059536642971,0.116193942869518,0.10366105501537,0,1.45990943630332,1.56449532329816,0,1.38134921352481,0,0.721879481669586,0.591534000199219,0,0,0.55146986366197,0,0.237270619111097,0,1.17732879075208,0,0,0,0,0,0,0,0.590789906681404,0.882926198829301,0,0,0,0,0.100528972411631,0,0.325808305310325,0,0,0,0,0,0,0,1.58040879591855,6.00940313466411,0,0.234004265139238,0,0,0,0,0,0,0.383382679165211,0,0.352193736052904,9.12243708379397,8.79131715843465,11.8667887420797,0.126995788584338,0.381988425558278,0,0,0.102827492703324,0,0,0.560655421726804,0.43596006883328,0,0,0,0,0,0,0,1.41849132023278,0.266422179016099,0.142977993658148,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0.144781306667579,0,0.179060963239896,0.112085143993527,0.394061520403854,1.07813787429759,0.898401253958239,0.254094624222463,0,0,0.335032530668698,0,0.749007023947182,0,1.24324654030811,0.12269149171914,0.500170521059677,0,0,0,0,0,0,0,0,0,0,0,0.587403472388222,0.686286847621712,0.413536052245775,0.215714200818617,0,0.606255142892519,0,0.30239029332968,0,0,0.280660094433074,0,0,0.160853921143607,0,0,0,0,0,0.116210378459959,0.120859449591622,0,0.0920809889358963,0,0,0,0.451199612907412,0,0.784349769176855,0,0,1.13733384070897,0,0.215915916102139,1.54227252690289,0,0.501689773854853,0.254876273045038,1.66215201785745,0.447749509444357,0,0,0,0,0,2.98818933778395,0.0915694648183434,0.165018999841176,0,0,0,0.290012154876366,0,0,0.275673144969061,0,0.145016693914229,0,0,0,0,0.255225424989168,0,0,0,0,0.616067160352178,0,0,0.18532421910392,0.143124886741991,0,0,0,0.255897791311334,0,0,0,0,0,0.117812402345686,0,0,0.421258456238981,0,0,2.11300293513511,0.136499911407986,0,1.13008116620243,0,0,0.438450885253763,0,0,0.405820753925408,0.6196469961995,0,0,0,0,0.354761064070598,0,0,0,0.699869440489966,0.0962221127255121,0,0,2.2594512186427,0,0,0,0,0,0.764637207142375,0.569647187174163,0.238231775457789,0.822724546172388,0,1.08006287447623,0,0.106824071127473,0,0,0.371606350251437,0.144269212976445,0,0,0.199579371432817,0.191505370132367,0.211673582723883,0,0,0.228234679033192,0,0,0,0.481764225311099,0.201799707191048,0,0.687010689511529,0.307240764308458,0,0.333698283423817,0,0.278406173895242,0,0,0,0,0,0.293016358543788,0.242721043499027,1.11443384277478,0,0.23874448473769,0.296964680832639,0,0,3.51673541026282,0.222617410045812,0.329607748453519,0.422250816255987,2.78947183551498,0.552567831062295,0,0.102268682502155,0.984678443688556,0,0,0,0,0.591860433821602,0,0,0.969332746095218,0.278304294485554,0,0,0.174919999992391,0,0,0,0,0.344743373241465,0,0.173624994933292,0.885741385813839,0.964771509003264,0,3.31737779793674,0.295547618953547,0.658156191461918,0.10893846351899,0,0.0769502585037971,0,0.23056390438806,0.0897576444097721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| ||
|short_description=p@chr6:31795013..31795063,- | |||
}} | }} |
Latest revision as of 00:11, 31 July 2015
Short description: | p@chr6:31795013..31795063, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:31795013..31795063, - |
Coexpression cluster: | C2784_Mast_vagina_CD14_liver_medulla_thalamus_substantia |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 8.99e-17 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.99e-17 | 42 |
defensive cell | 6.88e-14 | 48 |
phagocyte | 6.88e-14 | 48 |
myeloid leukocyte | 2.56e-12 | 72 |
myeloid lineage restricted progenitor cell | 8.41e-12 | 66 |
granulocyte monocyte progenitor cell | 1.58e-11 | 67 |
hematopoietic lineage restricted progenitor cell | 7.22e-11 | 120 |
leukocyte | 6.40e-10 | 136 |
monopoietic cell | 6.49e-10 | 59 |
monocyte | 6.49e-10 | 59 |
monoblast | 6.49e-10 | 59 |
promonocyte | 6.49e-10 | 59 |
macrophage dendritic cell progenitor | 2.07e-09 | 61 |
nongranular leukocyte | 6.12e-09 | 115 |
hematopoietic oligopotent progenitor cell | 1.52e-07 | 161 |
hematopoietic multipotent progenitor cell | 1.52e-07 | 161 |
hematopoietic stem cell | 7.37e-07 | 168 |
Ontology term | p-value | n |
---|---|---|
adult organism | 2.48e-13 | 114 |
neural tube | 2.61e-11 | 56 |
neural rod | 2.61e-11 | 56 |
future spinal cord | 2.61e-11 | 56 |
neural keel | 2.61e-11 | 56 |
bone marrow | 2.46e-10 | 76 |
immune system | 6.93e-10 | 93 |
regional part of nervous system | 1.08e-09 | 53 |
regional part of brain | 1.08e-09 | 53 |
hematopoietic system | 1.11e-09 | 98 |
blood island | 1.11e-09 | 98 |
bone element | 4.28e-09 | 82 |
hemolymphoid system | 7.11e-09 | 108 |
skeletal element | 1.02e-07 | 90 |
neural plate | 1.63e-07 | 82 |
presumptive neural plate | 1.63e-07 | 82 |
diencephalon | 3.28e-07 | 7 |
future diencephalon | 3.28e-07 | 7 |
regional part of forebrain | 4.05e-07 | 41 |
forebrain | 4.05e-07 | 41 |
anterior neural tube | 4.05e-07 | 41 |
future forebrain | 4.05e-07 | 41 |
skeletal system | 5.43e-07 | 100 |
neurectoderm | 6.71e-07 | 86 |