FFCP PHASE1:Hg19::chr6:53481502..53481514,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:53481502..53481514,+ | |||
|description=CAGE_peak_at_chr6:53481502..53481514,+ | |description=CAGE_peak_at_chr6:53481502..53481514,+ | ||
|id=chr6:53481502..53481514,+ | |id=chr6:53481502..53481514,+ | ||
|ontology_enrichment_celltype=CL:0000066!3.84e-38!254;CL:0000223!8.80e-31!59;CL:0002076!4.79e-19!43;CL:0000082!2.34e-11!19;CL:0000181!1.03e-10!12;CL:0000417!1.03e-10!12;CL:0000668!1.03e-10!12;CL:0000414!1.03e-10!12;CL:0000412!1.03e-10!12;CL:0000182!1.03e-10!12;CL:0002251!8.85e-10!21;CL:0002368!2.98e-08!13 | |ontology_enrichment_celltype=CL:0000066!3.84e-38!254;CL:0000223!8.80e-31!59;CL:0002076!4.79e-19!43;CL:0000082!2.34e-11!19;CL:0000181!1.03e-10!12;CL:0000417!1.03e-10!12;CL:0000668!1.03e-10!12;CL:0000414!1.03e-10!12;CL:0000412!1.03e-10!12;CL:0000182!1.03e-10!12;CL:0002251!8.85e-10!21;CL:0002368!2.98e-08!13 | ||
|ontology_enrichment_celltype_v019=CL:0000082;2.64e-10;19!CL:0002368;1.78e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.01e-16,253;CL:0000223,1.41e-12,58;CL:0000082,2.46e-10,19;CL:0002368,1.86e-07,13 | |||
|ontology_enrichment_development_v019=UBERON:0001041;4.25e-15;30!CL:0000223;1.72e-08;58!UBERON:0009497;6.46e-08;13 | |||
|ontology_enrichment_disease=DOID:305!4.04e-39!106;DOID:0050687!4.39e-26!143;DOID:1749!1.02e-15!14;DOID:14566!9.78e-14!239;DOID:162!3.79e-13!235;DOID:0050615!2.72e-10!16;DOID:299!1.13e-09!25;DOID:1324!5.48e-09!15 | |||
|ontology_enrichment_disease_v019=DOID:0050615;1.32e-12;16!DOID:1749;3.46e-10;14!DOID:1324;5.91e-10;15 | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.52e-15,106;DOID:0050615,1.19e-12,16;DOID:0050687,2.85e-11,143;DOID:1749,2.86e-10,14;DOID:1324,5.38e-10,15 | |||
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|short_description=p@chr6:53481502..53481514,+ | |short_description=p@chr6:53481502..53481514,+ | ||
}} | }} |
Latest revision as of 02:23, 31 July 2015
Short description: | p@chr6:53481502..53481514, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:53481502..53481514, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.01e-16 | 253 |
endodermal cell | 1.41e-12 | 58 |
epithelial cell of lung | 2.46e-10 | 19 |
respiratory epithelial cell | 1.86e-07 | 13 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.52e-15 | 106 |
respiratory system cancer | 1.19e-12 | 16 |
cell type cancer | 2.85e-11 | 143 |
squamous cell carcinoma | 2.86e-10 | 14 |
lung cancer | 5.38e-10 | 15 |