FFCP PHASE1:Hg19::chr7:142344506..142344509,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-289bp_to_AJ296363,AJ296373,HM236738_5end | |association_with_transcript=-289bp_to_AJ296363,AJ296373,HM236738_5end | ||
|cluster_id=chr7:142344506..142344509,+ | |||
|coexpression_cluster_id=C496 | |||
|description=CAGE_peak_1_at_AJ296363_5end,CAGE_peak_1_at_AJ296373_5end,CAGE_peak_1_at_HM236738_5end | |description=CAGE_peak_1_at_AJ296363_5end,CAGE_peak_1_at_AJ296373_5end,CAGE_peak_1_at_HM236738_5end | ||
|id=chr7:142344506..142344509,+ | |id=chr7:142344506..142344509,+ | ||
|ontology_enrichment_celltype=CL:0000791!1.58e-48!18;CL:0000789!1.58e-48!18;CL:0002420!1.58e-48!18;CL:0002419!1.58e-48!18;CL:0000790!1.58e-48!18;CL:0000084!5.40e-39!25;CL:0000827!5.40e-39!25;CL:0000838!8.15e-30!52;CL:0000542!3.74e-29!53;CL:0000051!3.74e-29!53;CL:0000625!6.58e-29!11;CL:0000624!8.19e-25!6;CL:0000898!1.10e-13!3;CL:0000623!1.41e-12!3;CL:0000825!1.41e-12!3;CL:0002087!2.08e-12!119;CL:0002031!1.52e-10!124;CL:0000815!7.46e-10!2;CL:0000792!7.46e-10!2;CL:0002677!7.46e-10!2;CL:0000738!9.06e-10!140;CL:0000037!5.09e-07!172;CL:0000566!5.09e-07!172;CL:0002032!9.87e-07!165;CL:0000837!9.87e-07!165 | |ontology_enrichment_celltype=CL:0000791!1.58e-48!18;CL:0000789!1.58e-48!18;CL:0002420!1.58e-48!18;CL:0002419!1.58e-48!18;CL:0000790!1.58e-48!18;CL:0000084!5.40e-39!25;CL:0000827!5.40e-39!25;CL:0000838!8.15e-30!52;CL:0000542!3.74e-29!53;CL:0000051!3.74e-29!53;CL:0000625!6.58e-29!11;CL:0000624!8.19e-25!6;CL:0000898!1.10e-13!3;CL:0000623!1.41e-12!3;CL:0000825!1.41e-12!3;CL:0002087!2.08e-12!119;CL:0002031!1.52e-10!124;CL:0000815!7.46e-10!2;CL:0000792!7.46e-10!2;CL:0002677!7.46e-10!2;CL:0000738!9.06e-10!140;CL:0000037!5.09e-07!172;CL:0000566!5.09e-07!172;CL:0002032!9.87e-07!165;CL:0000837!9.87e-07!165 | ||
|ontology_enrichment_celltype_v019=CL:0000815;1.92e-29;2!CL:0000792;1.92e-29;2!CL:0002677;1.92e-29;2!CL:0000898;5.36e-20;3!CL:0000084;3.02e-14;25!CL:0000791;6.54e-13;18!CL:0000789;6.54e-13;18!CL:0002419;6.54e-13;18!CL:0000624;1.73e-10;6!CL:0000542;1.64e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000815,2.22e-29,2;CL:0000792,2.22e-29,2;CL:0002677,2.22e-29,2;CL:0000898,5.91e-20,3;CL:0000084,2.52e-14,25;CL:0000827,2.52e-14,25;CL:0000791,5.43e-13,18;CL:0000789,5.43e-13,18;CL:0002420,5.43e-13,18;CL:0002419,5.43e-13,18;CL:0000790,5.43e-13,18;CL:0000624,1.81e-10,6;CL:0000838,1.32e-09,52;CL:0000542,2.02e-09,53;CL:0000051,2.02e-09,53 | |||
|ontology_enrichment_development_v019=CL:0000790;6.54e-13;18!CL:0000051;1.64e-07;53 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002370!1.60e-10!4;UBERON:0005058!1.60e-10!4;UBERON:0009113!1.60e-10!4;UBERON:0003295!1.60e-10!4;UBERON:0005562!1.60e-10!4;UBERON:0003351!3.90e-07!6;UBERON:0000974!4.37e-07!10;UBERON:0001042!6.47e-07!10;UBERON:0009145!6.47e-07!10 | |ontology_enrichment_uberon=UBERON:0002370!1.60e-10!4;UBERON:0005058!1.60e-10!4;UBERON:0009113!1.60e-10!4;UBERON:0003295!1.60e-10!4;UBERON:0005562!1.60e-10!4;UBERON:0003351!3.90e-07!6;UBERON:0000974!4.37e-07!10;UBERON:0001042!6.47e-07!10;UBERON:0009145!6.47e-07!10 | ||
|ontology_enrichment_uberon_v019=UBERON:0002370;4.48e-30;2!UBERON:0005058;4.48e-30;2!UBERON:0009113;4.48e-30;2!UBERON:0004177;1.19e-12;5!UBERON:0005057;1.19e-12;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.44e-15,4;UBERON:0005058,1.44e-15,4;UBERON:0009113,1.44e-15,4;UBERON:0003295,1.44e-15,4;UBERON:0005562,1.44e-15,4;UBERON:0003351,1.07e-10,6;UBERON:0004177,2.69e-09,7;UBERON:0005057,2.69e-09,7;UBERON:0000974,9.22e-07,10;UBERON:0003408,9.22e-07,10;UBERON:0001042,9.22e-07,10;UBERON:0009145,9.22e-07,10 | |||
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| ||
|short_description=p1@AJ296363,p1@AJ296373,p1@HM236738 | |short_description=p1@AJ296363,p1@AJ296373,p1@HM236738 | ||
}} | }} |
Latest revision as of 06:55, 31 July 2015
Short description: | p1@AJ296363, p1@AJ296373, p1@HM236738 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_AJ296363_5end, CAGE_peak_1_at_AJ296373_5end, CAGE_peak_1_at_HM236738_5end |
Coexpression cluster: | C496_thymus_CD4_CD8_hairy_vein_chronic_Peripheral |
Association with transcript: | -289bp_to_AJ296363, AJ296373, HM236738_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
regulatory T cell | 2.22e-29 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 2.22e-29 | 2 |
naive regulatory T cell | 2.22e-29 | 2 |
naive T cell | 5.91e-20 | 3 |
T cell | 2.52e-14 | 25 |
pro-T cell | 2.52e-14 | 25 |
mature alpha-beta T cell | 5.43e-13 | 18 |
alpha-beta T cell | 5.43e-13 | 18 |
immature T cell | 5.43e-13 | 18 |
mature T cell | 5.43e-13 | 18 |
immature alpha-beta T cell | 5.43e-13 | 18 |
CD4-positive, alpha-beta T cell | 1.81e-10 | 6 |
lymphoid lineage restricted progenitor cell | 1.32e-09 | 52 |
lymphocyte | 2.02e-09 | 53 |
common lymphoid progenitor | 2.02e-09 | 53 |
Ontology term | p-value | n |
---|---|---|
thymus | 1.44e-15 | 4 |
hemolymphoid system gland | 1.44e-15 | 4 |
thymic region | 1.44e-15 | 4 |
pharyngeal gland | 1.44e-15 | 4 |
thymus primordium | 1.44e-15 | 4 |
pharyngeal epithelium | 1.07e-10 | 6 |
hemopoietic organ | 2.69e-09 | 7 |
immune organ | 2.69e-09 | 7 |
neck | 9.22e-07 | 10 |
gland of gut | 9.22e-07 | 10 |
chordate pharynx | 9.22e-07 | 10 |
pharyngeal region of foregut | 9.22e-07 | 10 |