FFCP PHASE1:Hg19::chr7:27160553..27160560,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000523364,uc010kux.1_5end | |association_with_transcript=0bp_to_ENST00000523364,uc010kux.1_5end | ||
|cluster_id=chr7:27160553..27160560,+ | |||
|coexpression_cluster_id=C224 | |||
|description=CAGE_peak_1_at_ENST00000523364_5end,CAGE_peak_1_at_uc010kux.1_5end | |description=CAGE_peak_1_at_ENST00000523364_5end,CAGE_peak_1_at_uc010kux.1_5end | ||
|id=chr7:27160553..27160560,+ | |id=chr7:27160553..27160560,+ | ||
|ontology_enrichment_celltype=CL:1000507!3.61e-22!12;CL:1000494!3.61e-22!12;CL:1000497!3.63e-17!18;CL:0002518!3.63e-17!18;CL:1000449!4.88e-16!16;CL:0002681!8.89e-10!13;CL:0002584!8.89e-10!13 | |ontology_enrichment_celltype=CL:1000507!3.61e-22!12;CL:1000494!3.61e-22!12;CL:1000497!3.63e-17!18;CL:0002518!3.63e-17!18;CL:1000449!4.88e-16!16;CL:0002681!8.89e-10!13;CL:0002584!8.89e-10!13 | ||
|ontology_enrichment_celltype_v019=CL:1000507;3.93e-44;10!CL:1000494;3.93e-44;10!CL:1000497;3.22e-35;17!CL:0002518;3.22e-35;17!CL:1000449;2.21e-29;15!CL:0000650;1.27e-25;2!CL:1000500;1.27e-25;2!CL:1000618;1.27e-25;2!CL:1001318;1.27e-25;2!CL:0002173;1.27e-25;2!CL:0000239;1.94e-17;3!CL:1000615;1.94e-17;3!CL:0002306;1.94e-17;3!CL:0002681;9.68e-17;12!CL:0002584;9.68e-17;12!CL:0000669;2.50e-13;4!CL:0002149;2.55e-09;6!CL:0002255;2.55e-09;6!CL:1000746;5.28e-08;7!CL:1000612;5.28e-08;7 | |||
|ontology_enrichment_celltype_v019_2=CL:1000507,4.94e-44,10;CL:1000494,4.94e-44,10;CL:1000497,3.77e-35,17;CL:0002518,3.77e-35,17;CL:1000449,2.57e-29,15;CL:0000650,2.37e-25,2;CL:1000500,2.37e-25,2;CL:1000618,2.37e-25,2;CL:1001318,2.37e-25,2;CL:0002173,2.37e-25,2;CL:0000239,1.94e-17,3;CL:1000615,1.94e-17,3;CL:0002306,1.94e-17,3;CL:0002681,1.19e-16,12;CL:0002584,1.19e-16,12;CL:0000669,3.42e-13,4;CL:0002149,2.56e-09,6;CL:0002255,2.56e-09,6;CL:1000746,6.29e-08,7;CL:1000612,6.29e-08,7 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:4468!4.23e-07!2 | |||
|ontology_enrichment_disease_v019=DOID:4468;3.81e-26;2!DOID:3001;2.55e-09;6!DOID:299;2.64e-08;25!DOID:120;1.05e-07;27!DOID:3910;1.70e-07;2!DOID:193;3.49e-07;29 | |||
|ontology_enrichment_disease_v019_2=DOID:4468,4.63e-26,2;DOID:3001,2.56e-09,6;DOID:299,2.72e-08,25;DOID:120,1.08e-07,27;DOID:3910,1.20e-07,2;DOID:193,3.58e-07,29 | |||
|ontology_enrichment_uberon=UBERON:0009773!3.61e-22!12;UBERON:0001231!3.61e-22!12;UBERON:0004810!3.61e-22!12;UBERON:0002113!9.12e-20!27;UBERON:0003918!9.12e-20!27;UBERON:0005095!9.12e-20!27;UBERON:0007687!9.12e-20!27;UBERON:0000489!1.68e-18!32;UBERON:0006555!6.23e-18!17;UBERON:0005103!6.23e-18!17;UBERON:0000083!6.23e-18!17;UBERON:0009201!6.23e-18!17;UBERON:0004819!6.23e-18!17;UBERON:0006553!6.23e-18!17;UBERON:0003074!6.23e-18!17;UBERON:0003060!6.23e-18!17;UBERON:0000080!8.70e-17!18;UBERON:0002120!8.70e-17!18;UBERON:0004875!8.70e-17!18;UBERON:0005721!8.70e-17!18;UBERON:0005754!8.70e-17!18;UBERON:0007297!8.70e-17!18;UBERON:0003887!1.83e-16!21;UBERON:0004211!4.88e-16!16;UBERON:0001285!4.88e-16!16;UBERON:0007684!4.88e-16!16;UBERON:0003220!4.88e-16!16;UBERON:0004208!4.88e-16!16;UBERON:0000058!2.91e-15!26;UBERON:0004876!7.65e-15!20;UBERON:0009569!1.40e-14!113;UBERON:0002417!3.18e-14!61;UBERON:0000916!3.18e-14!61;UBERON:0006554!1.04e-13!44;UBERON:0001008!2.64e-13!45;UBERON:0003103!5.30e-12!69;UBERON:0003886!5.91e-12!63;UBERON:0000464!1.44e-11!104;UBERON:0005172!1.85e-11!55;UBERON:0005173!1.85e-11!55;UBERON:0002553!2.97e-10!70;UBERON:0005177!3.86e-10!107;UBERON:0000466!4.78e-10!126;UBERON:0002100!4.89e-10!216;UBERON:0001225!8.89e-10!13;UBERON:0008987!8.89e-10!13;UBERON:0003064!1.54e-09!37;UBERON:0003914!1.23e-08!118;UBERON:0001851!1.00e-07!16;UBERON:0003104!1.26e-07!238;UBERON:0009142!1.26e-07!238;UBERON:0000353!3.34e-07!17 | |||
|ontology_enrichment_uberon_v019=UBERON:0004211;3.93e-44;10!UBERON:0009773;3.93e-44;10!UBERON:0001231;3.93e-44;10!UBERON:0004810;3.93e-44;10!UBERON:0006555;2.21e-29;15!UBERON:0004819;2.21e-29;15!UBERON:0001285;2.21e-29;15!UBERON:0007684;2.21e-29;15!UBERON:0003567;1.27e-25;2!UBERON:0003838;1.27e-25;2!UBERON:0003586;1.27e-25;2!UBERON:0005169;1.27e-25;2!UBERON:0002321;1.27e-25;2!UBERON:0005215;1.27e-25;2!UBERON:0002303;1.27e-25;2!UBERON:0002319;1.27e-25;2!UBERON:0002113;7.97e-25;24!UBERON:0011143;7.97e-25;24!UBERON:0000489;1.83e-20;29!UBERON:0006554;9.14e-20;30!UBERON:0001008;9.14e-20;30!UBERON:0006853;1.94e-17;3!UBERON:0007685;1.94e-17;3!UBERON:0004134;1.94e-17;3!UBERON:0001225;9.68e-17;12!UBERON:0008987;9.68e-17;12!UBERON:0001851;1.87e-13;15!UBERON:0000353;1.87e-13;15!UBERON:0003891;2.50e-13;4!UBERON:0005172;2.29e-08;52!UBERON:0005173;2.29e-08;52!UBERON:0000074;5.28e-08;7!UBERON:0001229;5.28e-08;7!UBERON:0004903;1.70e-07;2!UBERON:0002173;1.70e-07;2!UBERON:0002186;1.70e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004810,4.94e-44,10;UBERON:0004211,2.57e-29,15;UBERON:0009773,2.57e-29,15;UBERON:0001231,2.57e-29,15;UBERON:0001285,2.57e-29,15;UBERON:0007684,2.57e-29,15;UBERON:0004208,2.57e-29,15;UBERON:0006555,1.79e-27,16;UBERON:0004819,1.79e-27,16;UBERON:0003567,2.37e-25,2;UBERON:0003838,2.37e-25,2;UBERON:0003586,2.37e-25,2;UBERON:0005169,2.37e-25,2;UBERON:0002321,2.37e-25,2;UBERON:0005215,2.37e-25,2;UBERON:0002303,2.37e-25,2;UBERON:0002319,2.37e-25,2;UBERON:0002113,7.77e-23,26;UBERON:0003918,7.77e-23,26;UBERON:0011143,7.77e-23,26;UBERON:0005095,7.77e-23,26;UBERON:0007687,7.77e-23,26;UBERON:0000489,4.48e-19,31;UBERON:0006853,1.94e-17,3;UBERON:0007685,1.94e-17,3;UBERON:0004134,1.94e-17,3;UBERON:0001225,1.19e-16,12;UBERON:0008987,1.19e-16,12;UBERON:0001851,2.21e-13,15;UBERON:0000353,2.21e-13,15;UBERON:0003891,3.42e-13,4;UBERON:0006554,2.12e-12,47;UBERON:0001008,3.95e-12,48;UBERON:0003103,7.39e-11,68;UBERON:0005172,1.02e-10,54;UBERON:0005173,1.02e-10,54;UBERON:0002417,1.38e-09,60;UBERON:0000916,1.38e-09,60;UBERON:0009569,5.48e-08,112;UBERON:0010532,6.29e-08,7;UBERON:0000074,6.29e-08,7;UBERON:0001229,6.29e-08,7;UBERON:0001230,6.29e-08,7;UBERON:0003220,6.29e-08,7;UBERON:0005749,6.29e-08,7;UBERON:0004199,6.29e-08,7;UBERON:0004209,6.29e-08,7;UBERON:0004198,6.29e-08,7;UBERON:0004903,1.20e-07,2;UBERON:0002173,1.20e-07,2;UBERON:0002186,1.20e-07,2;UBERON:0005177,4.45e-07,101;UBERON:0005103,4.84e-07,8;UBERON:0000083,4.84e-07,8;UBERON:0009201,4.84e-07,8;UBERON:0006553,4.84e-07,8;UBERON:0003074,4.84e-07,8;UBERON:0003060,4.84e-07,8 | |||
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| ||
|short_description=p1@ENST00000523364,p1@uc010kux.1 | |short_description=p1@ENST00000523364,p1@uc010kux.1 | ||
}} | }} |
Latest revision as of 09:01, 31 July 2015
Short description: | p1@ENST00000523364, p1@uc010kux.1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000523364_5end, CAGE_peak_1_at_uc010kux.1_5end |
Coexpression cluster: | C224_clear_serous_pleomorphic_choriocarcinoma_mesothelioma_amniotic_renal |
Association with transcript: | 0bp_to_ENST00000523364, uc010kux.1_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 4.94e-44 | 10 |
nephron tubule epithelial cell | 4.94e-44 | 10 |
kidney cell | 3.77e-35 | 17 |
kidney epithelial cell | 3.77e-35 | 17 |
epithelial cell of nephron | 2.57e-29 | 15 |
mesangial cell | 2.37e-25 | 2 |
kidney interstitial cell | 2.37e-25 | 2 |
juxtaglomerular complex cell | 2.37e-25 | 2 |
renal interstitial pericyte | 2.37e-25 | 2 |
extraglomerular mesangial cell | 2.37e-25 | 2 |
brush border epithelial cell | 1.94e-17 | 3 |
kidney cortex tubule cell | 1.94e-17 | 3 |
epithelial cell of proximal tubule | 1.94e-17 | 3 |
kidney cortical cell | 1.19e-16 | 12 |
renal cortical epithelial cell | 1.19e-16 | 12 |
pericyte cell | 3.42e-13 | 4 |
epithelial cell of uterus | 2.56e-09 | 6 |
stromal cell of endometrium | 2.56e-09 | 6 |
glomerular cell | 6.29e-08 | 7 |
kidney corpuscule cell | 6.29e-08 | 7 |
Ontology term | p-value | n |
---|---|---|
clear cell adenocarcinoma | 4.63e-26 | 2 |
female reproductive endometrioid cancer | 2.56e-09 | 6 |
adenocarcinoma | 2.72e-08 | 25 |
female reproductive organ cancer | 1.08e-07 | 27 |
lung adenocarcinoma | 1.20e-07 | 2 |
reproductive organ cancer | 3.58e-07 | 29 |