FFCP PHASE1:Hg19::chr7:642229..642251,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr7:642229..642251,- | |||
|coexpression_cluster_id=C1900 | |||
|description=CAGE_peak_at_chr7:642229..642251,- | |description=CAGE_peak_at_chr7:642229..642251,- | ||
|id=chr7:642229..642251,- | |id=chr7:642229..642251,- | ||
|ontology_enrichment_celltype=CL:0000738!4.83e-42!140;CL:0000988!3.36e-41!182;CL:0000557!2.72e-39!71;CL:0002031!4.16e-39!124;CL:0000037!7.04e-39!172;CL:0000566!7.04e-39!172;CL:0000766!1.88e-37!76;CL:0002032!7.92e-37!165;CL:0000837!7.92e-37!165;CL:0000839!2.02e-36!70;CL:0002057!8.29e-36!42;CL:0002087!1.63e-35!119;CL:0002009!3.12e-35!65;CL:0002194!2.96e-33!63;CL:0000576!2.96e-33!63;CL:0000040!2.96e-33!63;CL:0000559!2.96e-33!63;CL:0000763!8.67e-33!112;CL:0000049!8.67e-33!112;CL:0000860!3.02e-32!45;CL:0000134!4.89e-22!358;CL:0002320!3.03e-21!365;CL:0000048!9.08e-18!430;CL:0000723!7.11e-17!436;CL:0000219!8.46e-17!390;CL:0000034!2.44e-16!444;CL:0002393!9.55e-08!9;CL:0002397!9.55e-08!9;CL:0000840!4.60e-07!5;CL:0001029!4.60e-07!5;CL:0000080!7.11e-07!6;CL:0000990!9.56e-07!8 | |ontology_enrichment_celltype=CL:0000738!4.83e-42!140;CL:0000988!3.36e-41!182;CL:0000557!2.72e-39!71;CL:0002031!4.16e-39!124;CL:0000037!7.04e-39!172;CL:0000566!7.04e-39!172;CL:0000766!1.88e-37!76;CL:0002032!7.92e-37!165;CL:0000837!7.92e-37!165;CL:0000839!2.02e-36!70;CL:0002057!8.29e-36!42;CL:0002087!1.63e-35!119;CL:0002009!3.12e-35!65;CL:0002194!2.96e-33!63;CL:0000576!2.96e-33!63;CL:0000040!2.96e-33!63;CL:0000559!2.96e-33!63;CL:0000763!8.67e-33!112;CL:0000049!8.67e-33!112;CL:0000860!3.02e-32!45;CL:0000134!4.89e-22!358;CL:0002320!3.03e-21!365;CL:0000048!9.08e-18!430;CL:0000723!7.11e-17!436;CL:0000219!8.46e-17!390;CL:0000034!2.44e-16!444;CL:0002393!9.55e-08!9;CL:0002397!9.55e-08!9;CL:0000840!4.60e-07!5;CL:0001029!4.60e-07!5;CL:0000080!7.11e-07!6;CL:0000990!9.56e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0000860;6.70e-43;33!CL:0002057;6.70e-43;33!CL:0000473;1.12e-38;39!CL:0000234;1.12e-38;39!CL:0000576;1.22e-25;48!CL:0000766;4.16e-24;69!CL:0002087;2.09e-12;104!CL:0000763;1.55e-11;100!CL:0000738;3.18e-11;136!CL:0000097;5.39e-11;5!CL:0000840;3.04e-09;5!CL:0000988;5.19e-09;177!CL:0002393;1.06e-07;6!CL:0002397;1.06e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000557,1.56e-58,67;CL:0000839,7.05e-54,66;CL:0000766,9.66e-53,72;CL:0000473,3.08e-52,48;CL:0000234,3.08e-52,48;CL:0002009,9.74e-51,61;CL:0000860,1.77e-48,42;CL:0002057,1.77e-48,42;CL:0000738,1.12e-47,136;CL:0002031,1.57e-47,120;CL:0002194,3.25e-47,59;CL:0000576,3.25e-47,59;CL:0000040,3.25e-47,59;CL:0000559,3.25e-47,59;CL:0000988,4.43e-47,177;CL:0000763,5.63e-46,108;CL:0000049,5.63e-46,108;CL:0000037,3.21e-45,168;CL:0002032,1.30e-43,161;CL:0000837,1.30e-43,161;CL:0002087,2.04e-41,115;CL:0000134,8.99e-18,354;CL:0002320,5.07e-17,361;CL:0000219,2.17e-14,386;CL:0000048,2.16e-12,427;CL:0000034,5.92e-12,441;CL:0000723,6.21e-12,433;CL:0000097,4.90e-11,5;CL:0002028,4.90e-11,5;CL:0000840,3.08e-09,5;CL:0001029,3.08e-09,5 | |||
|ontology_enrichment_development_v019=CL:0002057;4.15e-36;42!CL:0000049;5.34e-12;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.93e-54!102;UBERON:0003061!2.93e-54!102;UBERON:0002193!9.55e-51!112;UBERON:0002371!1.92e-40!80;UBERON:0001474!7.77e-36!86;UBERON:0004765!4.98e-32!101;UBERON:0001434!4.98e-32!101;UBERON:0002405!1.80e-28!115;UBERON:0003081!4.25e-25!216;UBERON:0002384!1.16e-20!375;UBERON:0002204!6.83e-20!167;UBERON:0000178!1.01e-14!15;UBERON:0000179!1.01e-14!15;UBERON:0000463!1.01e-14!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.97e-26;15!UBERON:0000179;2.97e-26;15!UBERON:0000463;2.97e-26;15!UBERON:0002390;7.74e-13;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.10e-74,98;UBERON:0003061,1.10e-74,98;UBERON:0002193,4.94e-66,108;UBERON:0002371,1.68e-54,76;UBERON:0001474,2.02e-49,82;UBERON:0002405,6.74e-44,93;UBERON:0004765,1.06e-43,90;UBERON:0001434,7.71e-38,100;UBERON:0003081,1.15e-29,203;UBERON:0000178,2.56e-26,15;UBERON:0000179,2.56e-26,15;UBERON:0000463,2.56e-26,15;UBERON:0002204,9.09e-19,167;UBERON:0002384,1.13e-16,371;UBERON:0000926,7.79e-14,315;UBERON:0004120,7.79e-14,315;UBERON:0006603,7.79e-14,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0,7.64134057479513,7.06065069269533,7.63494578742689,1.57345710739562,0.767658796194425,1.39334510984468,0,0,0,0,0,0.293600439334847,3.87796785972314,2.20598892217156,2.82114131930607,0.671746422719773,0.647787332037959,0,0.726991193897824,3.02300754951048,1.4555043671269,3.71886459049095,9.04569353648017,8.981484755958,21.5769294241613,17.1627673374497,11.8241114944293,8.61864201841546,9.68227025375739,13.5426486594342,2.25890807451126,3.547779950752,3.59557575112135,6.12167784741805,7.38136762275015,10.8687311385837,1.31940520074686,3.59034583718937,3.83602275479425,6.67481248845743,15.3194010666608,6.85104473895132,9.2962006144995,10.9511412868242,10.6422533905507,3.02699751316684,11.4166067156145,7.59509729858123,2.11255286311942,1.27562579979026,0.628975936525128,0.44931452458598,0.150176892841506,0,0.855038231223746,0.39783335439818,0.730656615058536,0,0,0,0.426730222566507,0.400395987036012,0.574752439954483,0,0,0,1.76171156811282,0,0,3.36305137788922,0,0,0.393010762749165,0.205601498999509,0.668745981562712,0.32592226663359,0,0,1.89397776704795,1.17842362989935,0.443067789167242,0.812411591295047,1.15282187753108,1.43065282315866,0.164437904603676,0,0,0,0,0,0,0,0,0.253019692019503,0.318565414324097,0,0,0.301150238155546,0.127986611154418,0,0,0,0,0.534880391567015,0.579297615531196,2.43806866313962,0,0,0,0,0.144846518960824,0,0,0,0,0.087834785693126,0.261958150995425,0,0,10.3855165969499,10.0995247633575,6.91381394698099,0.476981248610684,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0.496971951695318,0,0,0,0,0,1.06748995729705,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.910161361938026,0,0,0,0,0.877955241761676,0,0.45071417671979,0,0,0.213557388818567,0,0,0,0.257640540045629,0.18611685633159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492434012174795,3.27605971194933,1.78357394746474,0,0,0,0,0,0,1.47798971368783,5.45900290882001,57.4298880047939,39.7771071430814,64.7623683477329,0,0,0,0,0,0,0,0,0.43596006883328,0,0.517086863031111,0,0,0,0,0.257207374262142,1.41849132023278,0.532844358032199,0,0,0.823240336780769,0,0,0,0,0,0,0,2.00902836572851,6.32501818449095,0,0,0,0,0,0,6.72510863961164,1.77327684181734,0.646882724578552,1.41177339907723,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0.368738337083406,0,0.195801157462741,0,1.44737618286021,1.07857100409308,1.06727557803444,0,0,0,0.496215615637554,0,0,0,0,0,0,0.616838775210622,1.06537035187876,0.164254312027618,0,1.04589340613963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270946437543853,0.501689773854853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.462145851343933,0.15350367472613,0.137836572484531,0,0,0.0852266274161009,0.178064071293475,0,0,0,0,0,0,0,0,0.532306030317022,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0.421258456238981,0,0.243713489631284,0,0,0,0,0,0,0,0,0,1.62328301570163,0.30982349809975,0,0,0,0.7133421029625,0,0.211107635297664,0.987884678879706,0,0,0,0,0,0.0941438007767792,0,0,0,0,3.04468565539302,3.82318603571188,2.84823593587081,1.90585420366231,4.52498500394814,2.59389324477087,4.86028293514303,3.96562588147135,0,0,0,0,0,0,0,0.199579371432817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.12493582569533,0,0,0,1.4098700508785,0,1.31857361344705,0,0.111443384277478,0,0.23874448473769,0.296964680832639,0,0,0,0,3.79048910721547,0,0.796991953004279,0.552567831062295,0,0,2.95403533106567,0,0,0,0,0,2.3948309234694,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0,0,0,0,0,0.31900115973192,0.183195186803725,0.533034776018635,0,4.39544717906069,0.332423363800313,1.1279783030859,3.13700054908383,2.01385904371011,1.3282761290693,0.476809736941136,0,0,0,0,0,0,0,63.7520426663337,15.8161841851524,13.4704314862037,0.269604531922708,0,0,0,0,0,0,0,0,0.31593289814244,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0.640358984218058,1.39866726707491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.88662062837944,0.558564802544508,0,0.717873024576814,0.399358000997982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.39937339723601,31.7258801368759,0,0,0,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0.13223260174269,0,0,0.747511887973863,0,1.65695622138878,0.992332043623902,0,0.60896299190448,0,2.1760712134779,1.0027595760908,1.53172788381731,0.655745261419609,0,0,0,0,0,0,0.18628920882415,0,0,11.0703855805403,0,0.941063278792687,0,0,0.895528817321244,0,0.554805861502613,0,0.754703705257725,2.66943366478961,0.228840068396924,0.151230923763239,0,0,0,0,0,0,0.53168342911599,1.5652351854352,0,0,0,0.909243296012797,0,0,1.59238355479446,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265729680626726,0.654261577023377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.636008701306837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,1.18284868973636,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177404740325278,1.7285098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| ||
|short_description=p@chr7:642229..642251,- | |short_description=p@chr7:642229..642251,- | ||
}} | }} |
Latest revision as of 11:04, 31 July 2015
Short description: | p@chr7:642229..642251, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:642229..642251, - |
Coexpression cluster: | C1900_Mast_cord_immature_CD14_CD34_chronic_CD4 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.10e-74 | 98 |
blood island | 1.10e-74 | 98 |
hemolymphoid system | 4.94e-66 | 108 |
bone marrow | 1.68e-54 | 76 |
bone element | 2.02e-49 | 82 |
immune system | 6.74e-44 | 93 |
skeletal element | 1.06e-43 | 90 |
skeletal system | 7.71e-38 | 100 |
lateral plate mesoderm | 1.15e-29 | 203 |
blood | 2.56e-26 | 15 |
haemolymphatic fluid | 2.56e-26 | 15 |
organism substance | 2.56e-26 | 15 |
musculoskeletal system | 9.09e-19 | 167 |
connective tissue | 1.13e-16 | 371 |
mesoderm | 7.79e-14 | 315 |
mesoderm-derived structure | 7.79e-14 | 315 |
presumptive mesoderm | 7.79e-14 | 315 |