FFCP PHASE1:Hg19::chr9:122602283..122602290,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr9:122602283..122602290,- | |||
|description=CAGE_peak_at_chr9:122602283..122602290,- | |description=CAGE_peak_at_chr9:122602283..122602290,- | ||
|id=chr9:122602283..122602290,- | |id=chr9:122602283..122602290,- | ||
|ontology_enrichment_celltype=CL:0002605!6.65e-39!3;CL:0000128!4.39e-17!7;CL:0000126!4.39e-17!7;CL:0000127!4.39e-17!7;CL:0002453!4.39e-17!7;CL:0002319!8.01e-08!25;CL:0000243!2.35e-07!15;CL:0000125!2.35e-07!15;CL:0000030!2.35e-07!15;CL:0000339!2.35e-07!15 | |ontology_enrichment_celltype=CL:0002605!6.65e-39!3;CL:0000128!4.39e-17!7;CL:0000126!4.39e-17!7;CL:0000127!4.39e-17!7;CL:0002453!4.39e-17!7;CL:0002319!8.01e-08!25;CL:0000243!2.35e-07!15;CL:0000125!2.35e-07!15;CL:0000030!2.35e-07!15;CL:0000339!2.35e-07!15 | ||
|ontology_enrichment_celltype_v019=CL:0002605;2.79e-195;3!CL:0000128;1.28e-84;7!CL:0000126;1.28e-84;7!CL:0000127;1.28e-84;7!CL:0000243;1.09e-35;15!CL:0000125;1.09e-35;15!CL:0000095;4.52e-32;17!CL:0002319;5.98e-23;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0002605,2.79e-195,3;CL:0000128,1.28e-84,7;CL:0000126,1.28e-84,7;CL:0000127,1.28e-84,7;CL:0002453,1.28e-84,7;CL:0000243,1.09e-35,15;CL:0000125,1.09e-35,15;CL:0000030,1.09e-35,15;CL:0000339,1.09e-35,15;CL:0000095,4.52e-32,17;CL:0000123,4.52e-32,17;CL:0002319,5.98e-23,25;CL:0000333,7.46e-15,41;CL:0000133,8.52e-11,59;CL:0000221,4.40e-09,72 | |||
|ontology_enrichment_development_v019=CL:0000339;1.09e-35;15!CL:0000133;5.20e-11;59!CL:0000221;1.63e-07;72 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002771!2.30e-17!3;UBERON:0002146!8.58e-14!1;UBERON:0005623!8.58e-14!1;UBERON:0002363!2.07e-13!1;UBERON:0007647!2.07e-13!1;UBERON:0010115!2.07e-13!1;UBERON:0000956!4.39e-12!25;UBERON:0000203!4.39e-12!25;UBERON:0002780!1.99e-10!41;UBERON:0001890!1.99e-10!41;UBERON:0006240!1.99e-10!41;UBERON:0003080!3.55e-10!42;UBERON:0001869!1.66e-09!32;UBERON:0003688!2.56e-09!6;UBERON:0002358!2.56e-09!6;UBERON:0003684!2.56e-09!6;UBERON:0001178!2.56e-09!6;UBERON:0002791!3.18e-09!33;UBERON:0000200!3.71e-09!6;UBERON:0002020!5.87e-09!34;UBERON:0003528!5.87e-09!34;UBERON:0001893!5.87e-09!34;UBERON:0001017!1.05e-08!82;UBERON:0003075!2.37e-08!86;UBERON:0007284!2.37e-08!86;UBERON:0005743!2.86e-08!86;UBERON:0002346!6.03e-08!90;UBERON:0003127!1.36e-07!2;UBERON:0001049!1.89e-07!57;UBERON:0005068!1.89e-07!57;UBERON:0006241!1.89e-07!57;UBERON:0007135!1.89e-07!57;UBERON:0001897!1.99e-07!2;UBERON:0000073!2.01e-07!94;UBERON:0001016!2.01e-07!94;UBERON:0002360!2.40e-07!2;UBERON:0000094!2.40e-07!2;UBERON:0007645!2.40e-07!2;UBERON:0002616!3.45e-07!59;UBERON:0001871!4.41e-07!7;UBERON:0003056!6.07e-07!61 | |ontology_enrichment_uberon=UBERON:0002771!2.30e-17!3;UBERON:0002146!8.58e-14!1;UBERON:0005623!8.58e-14!1;UBERON:0002363!2.07e-13!1;UBERON:0007647!2.07e-13!1;UBERON:0010115!2.07e-13!1;UBERON:0000956!4.39e-12!25;UBERON:0000203!4.39e-12!25;UBERON:0002780!1.99e-10!41;UBERON:0001890!1.99e-10!41;UBERON:0006240!1.99e-10!41;UBERON:0003080!3.55e-10!42;UBERON:0001869!1.66e-09!32;UBERON:0003688!2.56e-09!6;UBERON:0002358!2.56e-09!6;UBERON:0003684!2.56e-09!6;UBERON:0001178!2.56e-09!6;UBERON:0002791!3.18e-09!33;UBERON:0000200!3.71e-09!6;UBERON:0002020!5.87e-09!34;UBERON:0003528!5.87e-09!34;UBERON:0001893!5.87e-09!34;UBERON:0001017!1.05e-08!82;UBERON:0003075!2.37e-08!86;UBERON:0007284!2.37e-08!86;UBERON:0005743!2.86e-08!86;UBERON:0002346!6.03e-08!90;UBERON:0003127!1.36e-07!2;UBERON:0001049!1.89e-07!57;UBERON:0005068!1.89e-07!57;UBERON:0006241!1.89e-07!57;UBERON:0007135!1.89e-07!57;UBERON:0001897!1.99e-07!2;UBERON:0000073!2.01e-07!94;UBERON:0001016!2.01e-07!94;UBERON:0002360!2.40e-07!2;UBERON:0000094!2.40e-07!2;UBERON:0007645!2.40e-07!2;UBERON:0002616!3.45e-07!59;UBERON:0001871!4.41e-07!7;UBERON:0003056!6.07e-07!61 | ||
|ontology_enrichment_uberon_v019=UBERON:0000956;8.76e-24;25!UBERON:0000203;8.76e-24;25!UBERON:0002791;1.08e-19;32!UBERON:0001869;1.08e-19;32!UBERON:0003528;1.30e-18;34!UBERON:0002020;1.30e-18;34!UBERON:0001893;1.30e-18;34!UBERON:0002780;6.89e-12;41!UBERON:0001890;6.89e-12;41!UBERON:0000073;4.63e-09;53!UBERON:0002616;4.63e-09;53!UBERON:0000955;2.46e-07;68 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000956,8.76e-24,25;UBERON:0000203,8.76e-24,25;UBERON:0002791,5.33e-19,32;UBERON:0001869,5.33e-19,32;UBERON:0003528,5.55e-18,34;UBERON:0002020,5.55e-18,34;UBERON:0001893,5.55e-18,34;UBERON:0002780,3.52e-15,41;UBERON:0001890,3.52e-15,41;UBERON:0003080,3.52e-15,41;UBERON:0006240,3.52e-15,41;UBERON:0000073,4.68e-12,53;UBERON:0002616,4.68e-12,53;UBERON:0001049,1.77e-11,56;UBERON:0005068,1.77e-11,56;UBERON:0006241,1.77e-11,56;UBERON:0007135,1.77e-11,56;UBERON:0003056,1.22e-10,61;UBERON:0000955,1.53e-09,68;UBERON:0006238,1.53e-09,68;UBERON:0001017,3.31e-08,81;UBERON:0003075,3.31e-08,82;UBERON:0007284,3.31e-08,82;UBERON:0002346,7.10e-08,86;UBERON:0001016,1.68e-07,89 | |||
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|short_description=p@chr9:122602283..122602290,- | |short_description=p@chr9:122602283..122602290,- | ||
}} | }} |
Latest revision as of 22:17, 31 July 2015
Short description: | p@chr9:122602283..122602290, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr9:122602283..122602290, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 2.79e-195 | 3 |
oligodendrocyte | 1.28e-84 | 7 |
macroglial cell | 1.28e-84 | 7 |
astrocyte | 1.28e-84 | 7 |
oligodendrocyte precursor cell | 1.28e-84 | 7 |
glial cell (sensu Vertebrata) | 1.09e-35 | 15 |
glial cell | 1.09e-35 | 15 |
glioblast | 1.09e-35 | 15 |
glioblast (sensu Vertebrata) | 1.09e-35 | 15 |
neuron associated cell | 4.52e-32 | 17 |
neuron associated cell (sensu Vertebrata) | 4.52e-32 | 17 |
neural cell | 5.98e-23 | 25 |
migratory neural crest cell | 7.46e-15 | 41 |
neurectodermal cell | 8.52e-11 | 59 |
ectodermal cell | 4.40e-09 | 72 |
Ontology term | p-value | n |
---|---|---|
cerebral cortex | 8.76e-24 | 25 |
pallium | 8.76e-24 | 25 |
regional part of telencephalon | 5.33e-19 | 32 |
cerebral hemisphere | 5.33e-19 | 32 |
brain grey matter | 5.55e-18 | 34 |
gray matter | 5.55e-18 | 34 |
telencephalon | 5.55e-18 | 34 |
regional part of forebrain | 3.52e-15 | 41 |
forebrain | 3.52e-15 | 41 |
anterior neural tube | 3.52e-15 | 41 |
future forebrain | 3.52e-15 | 41 |
regional part of nervous system | 4.68e-12 | 53 |
regional part of brain | 4.68e-12 | 53 |
neural tube | 1.77e-11 | 56 |
neural rod | 1.77e-11 | 56 |
future spinal cord | 1.77e-11 | 56 |
neural keel | 1.77e-11 | 56 |
pre-chordal neural plate | 1.22e-10 | 61 |
brain | 1.53e-09 | 68 |
future brain | 1.53e-09 | 68 |
central nervous system | 3.31e-08 | 81 |
neural plate | 3.31e-08 | 82 |
presumptive neural plate | 3.31e-08 | 82 |
neurectoderm | 7.10e-08 | 86 |
nervous system | 1.68e-07 | 89 |