FFCP PHASE1:Hg19::chr9:132472174..132472192,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr9:132472174..132472192,+ to FFCP PHASE1:Hg19::chr9:132472174..132472192,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr9:132472174..132472192,+ | |||
|coexpression_cluster_id=C117 | |||
|description=CAGE_peak_at_chr9:132472174..132472192,+ | |||
|id=chr9:132472174..132472192,+ | |||
|ontology_enrichment_celltype=CL:0002620!4.06e-23!23;CL:0000057!2.42e-13!75;CL:1000449!2.29e-11!16;CL:1000507!6.35e-10!12;CL:1000494!6.35e-10!12;CL:1000497!7.80e-10!18;CL:0002518!7.80e-10!18;CL:0002681!4.17e-09!13;CL:0002584!4.17e-09!13;CL:0000346!1.03e-07!3;CL:1000428!1.03e-07!3;CL:0000055!1.93e-07!180 | |||
|ontology_enrichment_celltype_v019=CL:0002620;5.47e-36;23!CL:0000346;4.20e-15;3!CL:1000428;4.20e-15;3!CL:1000449;2.13e-14;15!CL:1000497;1.38e-12;17!CL:0002518;1.38e-12;17!CL:1000507;1.85e-11;10!CL:1000494;1.85e-11;10!CL:1000746;5.04e-11;7!CL:1000612;5.04e-11;7!CL:0000650;1.97e-10;2!CL:1000500;1.97e-10;2!CL:1000618;1.97e-10;2!CL:1001318;1.97e-10;2!CL:0002173;1.97e-10;2!CL:0002681;1.30e-09;12!CL:0002584;1.30e-09;12!CL:0002559;3.09e-09;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,4.93e-36,23;CL:0000346,4.31e-15,3;CL:1000428,4.31e-15,3;CL:1000449,2.16e-14,15;CL:0000057,2.58e-13,76;CL:1000497,1.39e-12,17;CL:0002518,1.39e-12,17;CL:1000507,1.85e-11,10;CL:1000494,1.85e-11,10;CL:1000746,5.17e-11,7;CL:1000612,5.17e-11,7;CL:0000650,2.02e-10,2;CL:1000500,2.02e-10,2;CL:1000618,2.02e-10,2;CL:1001318,2.02e-10,2;CL:0002173,2.02e-10,2;CL:0002681,1.29e-09,12;CL:0002584,1.29e-09,12;CL:0002559,3.14e-09,5;CL:0002580,9.35e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:17!3.95e-11!5;DOID:450!3.95e-11!5;DOID:66!3.95e-11!5;DOID:423!3.95e-11!5;DOID:0080000!3.95e-11!5;DOID:11722!3.95e-11!5 | |||
|ontology_enrichment_disease_v019=DOID:17;1.16e-22;5!DOID:450;1.16e-22;5!DOID:66;1.16e-22;5!DOID:423;1.16e-22;5!DOID:0080000;1.16e-22;5!DOID:11722;1.16e-22;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,1.33e-22,5;DOID:450,1.33e-22,5;DOID:66,1.33e-22,5;DOID:423,1.33e-22,5;DOID:0080000,1.33e-22,5;DOID:11722,1.33e-22,5 | |||
|ontology_enrichment_uberon=UBERON:0002097!2.66e-20!40;UBERON:0002199!6.53e-19!45;UBERON:0002416!6.53e-19!45;UBERON:0002113!2.70e-13!27;UBERON:0003918!2.70e-13!27;UBERON:0005095!2.70e-13!27;UBERON:0007687!2.70e-13!27;UBERON:0004211!2.29e-11!16;UBERON:0001285!2.29e-11!16;UBERON:0007684!2.29e-11!16;UBERON:0003220!2.29e-11!16;UBERON:0004208!2.29e-11!16;UBERON:0003102!5.62e-11!95;UBERON:0000489!1.37e-10!32;UBERON:0006555!1.49e-10!17;UBERON:0005103!1.49e-10!17;UBERON:0000083!1.49e-10!17;UBERON:0009201!1.49e-10!17;UBERON:0004819!1.49e-10!17;UBERON:0006553!1.49e-10!17;UBERON:0003074!1.49e-10!17;UBERON:0003060!1.49e-10!17;UBERON:0004876!2.07e-10!20;UBERON:0009773!6.35e-10!12;UBERON:0001231!6.35e-10!12;UBERON:0004810!6.35e-10!12;UBERON:0000080!7.80e-10!18;UBERON:0002120!7.80e-10!18;UBERON:0004875!7.80e-10!18;UBERON:0005721!7.80e-10!18;UBERON:0005754!7.80e-10!18;UBERON:0007297!7.80e-10!18;UBERON:0001225!4.17e-09!13;UBERON:0008987!4.17e-09!13;UBERON:0003887!4.30e-08!21;UBERON:0000475!4.46e-08!365;UBERON:0002067!7.11e-08!9;UBERON:0004016!7.11e-08!9;UBERON:0010083!7.11e-08!9;UBERON:0000412!1.03e-07!3;UBERON:0001992!1.03e-07!3;UBERON:0001851!4.29e-07!16 | |||
|ontology_enrichment_uberon_v019=UBERON:0002097;4.55e-26;41!UBERON:0002199;1.52e-18;46!UBERON:0002416;1.52e-18;46!UBERON:0003102;5.41e-16;50!UBERON:0000412;4.20e-15;3!UBERON:0001992;4.20e-15;3!UBERON:0006555;2.13e-14;15!UBERON:0004819;2.13e-14;15!UBERON:0001285;2.13e-14;15!UBERON:0007684;2.13e-14;15!UBERON:0004211;1.85e-11;10!UBERON:0009773;1.85e-11;10!UBERON:0001231;1.85e-11;10!UBERON:0004810;1.85e-11;10!UBERON:0002113;4.38e-11;24!UBERON:0011143;4.38e-11;24!UBERON:0000074;5.04e-11;7!UBERON:0001229;5.04e-11;7!UBERON:0003567;1.97e-10;2!UBERON:0003838;1.97e-10;2!UBERON:0003586;1.97e-10;2!UBERON:0005169;1.97e-10;2!UBERON:0002321;1.97e-10;2!UBERON:0005215;1.97e-10;2!UBERON:0002303;1.97e-10;2!UBERON:0002319;1.97e-10;2!UBERON:0001225;1.30e-09;12!UBERON:0008987;1.30e-09;12!UBERON:0002073;3.09e-09;5!UBERON:0000489;5.97e-09;29!UBERON:0006554;1.31e-08;30!UBERON:0001008;1.31e-08;30!UBERON:0001851;1.27e-07;15!UBERON:0000353;1.27e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002097,3.56e-32,41;UBERON:0002199,3.30e-28,46;UBERON:0002416,3.30e-28,46;UBERON:0000412,4.31e-15,3;UBERON:0001992,4.31e-15,3;UBERON:0004211,2.16e-14,15;UBERON:0009773,2.16e-14,15;UBERON:0001231,2.16e-14,15;UBERON:0001285,2.16e-14,15;UBERON:0007684,2.16e-14,15;UBERON:0004208,2.16e-14,15;UBERON:0006555,1.97e-13,16;UBERON:0004819,1.97e-13,16;UBERON:0004810,1.85e-11,10;UBERON:0010532,5.17e-11,7;UBERON:0000074,5.17e-11,7;UBERON:0001229,5.17e-11,7;UBERON:0001230,5.17e-11,7;UBERON:0003220,5.17e-11,7;UBERON:0005749,5.17e-11,7;UBERON:0004199,5.17e-11,7;UBERON:0004209,5.17e-11,7;UBERON:0004198,5.17e-11,7;UBERON:0003102,7.40e-11,99;UBERON:0003567,2.02e-10,2;UBERON:0003838,2.02e-10,2;UBERON:0003586,2.02e-10,2;UBERON:0005169,2.02e-10,2;UBERON:0002321,2.02e-10,2;UBERON:0005215,2.02e-10,2;UBERON:0002303,2.02e-10,2;UBERON:0002319,2.02e-10,2;UBERON:0002113,3.55e-10,26;UBERON:0003918,3.55e-10,26;UBERON:0011143,3.55e-10,26;UBERON:0005095,3.55e-10,26;UBERON:0007687,3.55e-10,26;UBERON:0005103,1.22e-09,8;UBERON:0000083,1.22e-09,8;UBERON:0009201,1.22e-09,8;UBERON:0006553,1.22e-09,8;UBERON:0003074,1.22e-09,8;UBERON:0003060,1.22e-09,8;UBERON:0001225,1.29e-09,12;UBERON:0008987,1.29e-09,12;UBERON:0002073,3.14e-09,5;UBERON:0005086,3.14e-09,5;UBERON:0000080,1.42e-08,9;UBERON:0002120,1.42e-08,9;UBERON:0004875,1.42e-08,9;UBERON:0005721,1.42e-08,9;UBERON:0005754,1.42e-08,9;UBERON:0007297,1.42e-08,9;UBERON:0000489,2.51e-08,31;UBERON:0001851,1.26e-07,15;UBERON:0000353,1.26e-07,15;UBERON:0004876,5.13e-07,11 | |||
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| ||
|short_description=p@chr9:132472174..132472192,+ | |||
}} | }} |
Latest revision as of 23:27, 31 July 2015
Short description: | p@chr9:132472174..132472192, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr9:132472174..132472192, + |
Coexpression cluster: | C117_serous_clear_kidney_neuroectodermal_mesothelioma_endometrial_Intestinal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 4.93e-36 | 23 |
hair follicle dermal papilla cell | 4.31e-15 | 3 |
stem cell of epidermis | 4.31e-15 | 3 |
epithelial cell of nephron | 2.16e-14 | 15 |
fibroblast | 2.58e-13 | 76 |
kidney cell | 1.39e-12 | 17 |
kidney epithelial cell | 1.39e-12 | 17 |
kidney tubule cell | 1.85e-11 | 10 |
nephron tubule epithelial cell | 1.85e-11 | 10 |
glomerular cell | 5.17e-11 | 7 |
kidney corpuscule cell | 5.17e-11 | 7 |
mesangial cell | 2.02e-10 | 2 |
kidney interstitial cell | 2.02e-10 | 2 |
juxtaglomerular complex cell | 2.02e-10 | 2 |
renal interstitial pericyte | 2.02e-10 | 2 |
extraglomerular mesangial cell | 2.02e-10 | 2 |
kidney cortical cell | 1.29e-09 | 12 |
renal cortical epithelial cell | 1.29e-09 | 12 |
hair follicle cell | 3.14e-09 | 5 |
preadipocyte of the breast | 9.35e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 1.33e-22 | 5 |
myotonic disease | 1.33e-22 | 5 |
muscle tissue disease | 1.33e-22 | 5 |
myopathy | 1.33e-22 | 5 |
muscular disease | 1.33e-22 | 5 |
myotonic dystrophy | 1.33e-22 | 5 |