FFCP PHASE1:Mm9::chr10:105011594..105011622,+: Difference between revisions
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{{FFCP|EntrezGene=327812|HGNC=|MCL_coexpression_id=13|UniProt=|association_with_transcript=0bp_to_ENSMUST00000145794,NR_038032_5end|description=CAGE_peak_1_at_Gm15663_5end|id=chr10:105011594..105011622,+|ontology_enrichment_celltype=CL:0000540!2.10e-10!33;CL:0000047!2.10e-10!33;CL:0000031!2.10e-10!33;CL:0000404!2.10e-10!33;CL:0000117!1.54e-08!23;CL:0000337!1.54e-08!23;CL:0000393!8.87e-08!39;CL:0000211!8.87e-08!39;CL:0002319!3.74e-07!43;CL:0000221!5.06e-07!44;CL:0000133!5.06e-07!44|ontology_enrichment_celltype_v019_2=CL:0000540,8.93e-11,33;CL:0000047,8.93e-11,33;CL:0000031,8.93e-11,33;CL:0000404,8.93e-11,33;CL:0000117,4.93e-09,23;CL:0000337,4.93e-09,23;CL:0000393,1.56e-07,39;CL:0000211,1.56e-07,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!2.07e-21!73;UBERON:0005743!2.07e-21!73;UBERON:0000073!2.19e-20!75;UBERON:0001016!2.19e-20!75;UBERON:0002346!2.25e-17!71;UBERON:0003075!2.25e-17!71;UBERON:0007284!2.25e-17!71;UBERON:0004121!5.45e-17!102;UBERON:0000924!5.45e-17!102;UBERON:0006601!5.45e-17!102;UBERON:0001049!7.90e-17!52;UBERON:0005068!7.90e-17!52;UBERON:0006241!7.90e-17!52;UBERON:0007135!7.90e-17!52;UBERON:0000033!1.51e-15!63;UBERON:0000955!5.12e-15!50;UBERON:0006238!5.12e-15!50;UBERON:0002616!1.72e-14!49;UBERON:0003056!1.28e-13!49;UBERON:0002020!3.11e-13!34;UBERON:0003080!1.22e-12!40;UBERON:0002780!4.35e-12!39;UBERON:0001890!4.35e-12!39;UBERON:0006240!4.35e-12!39;UBERON:0002791!1.10e-10!29;UBERON:0003528!1.10e-10!29;UBERON:0001893!1.10e-10!29;UBERON:0000468!5.11e-10!333;UBERON:0000922!1.65e-08!328;UBERON:0002021!2.10e-07!10;UBERON:0000411!2.10e-07!10;UBERON:0001950!2.10e-07!10;UBERON:0000025!3.48e-07!114;UBERON:0002619!5.21e-07!17;UBERON:0000956!6.61e-07!21;UBERON:0001869!6.61e-07!21;UBERON:0000203!6.61e-07!21|ontology_enrichment_uberon_v019_2=UBERON:0001017,8.60e-22,73;UBERON:0001016,2.16e-20,75;UBERON:0002346,4.38e-20,64;UBERON:0003075,4.38e-20,64;UBERON:0007284,4.38e-20,64;UBERON:0000073,6.00e-18,54;UBERON:0001049,1.30e-17,52;UBERON:0005068,1.30e-17,52;UBERON:0006241,1.30e-17,52;UBERON:0007135,1.30e-17,52;UBERON:0004121,1.33e-17,95;UBERON:0000924,1.33e-17,95;UBERON:0006601,1.33e-17,95;UBERON:0010371,9.70e-17,73;UBERON:0000955,1.25e-14,47;UBERON:0006238,1.25e-14,47;UBERON:0003056,3.65e-14,49;UBERON:0002616,4.62e-14,46;UBERON:0002020,6.26e-14,34;UBERON:0003080,4.92e-13,40;UBERON:0002780,1.98e-12,39;UBERON:0001890,1.98e-12,39;UBERON:0006240,1.98e-12,39;UBERON:0003528,4.06e-11,29;UBERON:0002791,4.06e-11,29;UBERON:0001893,4.06e-11,29;UBERON:0010314,6.56e-11,92;UBERON:0002021,4.34e-08,10;UBERON:0000411,4.34e-08,10;UBERON:0001950,4.34e-08,10;UBERON:0002619,2.43e-07,17;UBERON:0000922,5.63e-07,320;UBERON:0000956,5.70e-07,21;UBERON:0001869,5.70e-07,21;UBERON:0000203,5.70e-07,21|phase1_expression=2.24208385946712,0,0.454999239389536,0.30246421130683,0,0,0,0,0.140788722151667,0,0,0,0,0,0.333109761815663,0,0,0,0.137114433605739,0,1.19060606211498,0,0,0,0.22940928106717,0,0,0.430942465371778,0.380046838912748,0,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0.125896817975577,0.405507724878058,0.550640256485045,0,0.65407546914134,1.09843091367236,0.58328969722285,0.55994568650145,1.43752564364972,0,0,0,1.02903774414379,0.286533439938757,0.515672092277442,4.24864567805155,4.7609188134483,7.60597684207415,0,0.889294796111139,0.449949858640699,0,0.7104801149461,0.599200221036809,1.15265491596466,0.622137673850866,1.35005938331691,1.47227472945967,3.14216082844184,2.87129103237098,2.44981598429908,2.01275489138296,1.83843757322004,1.10115880999389,5.10749352340751,5.22262213071228,6.85808696197008,6.40413505216868,5.73004707612436,4.4669279840221,1.68828783009504,5.65353516774197,4.41942878210502,5.83723891276322,7.64237727883732,0.454357159999104,0.453429360640713,2.31891590961342,0,0.679971333707751,0,0.649776417447669,0.448026887097336,0.421333260395256,0,0,0,0.985903938436763,0,0,0,0,0,0,0.45673551887624,0.258937883647172,0.742210695324124,2.08182392119363,0.608930956624282,0.461230994512117,0.753613202763113,0.705532242814229,1.38233250462643,0,1.73519228303894,0,1.29413479957927,0.883366073841574,2.90925151881133,0,5.85561594023094,3.35114730901528,0.510914110417183,0.239630249011841,0,0.254140454146129,5.24267237916879,6.8625090422794,3.39266750704734,6.95297280769106,3.06858548796397,5.40248915854856,3.24482526135515,1.93494791315601,1.49288364732112,3.28539585963777,2.31486041475121,1.17108398666433,1.37941262660084,2.34080768746954,1.9591626318643,1.7009124787832,2.562274405697,1.49922759295566,2.32833033665114,1.29340795759705,5.10586416453112,6.68614271823006,4.3839146485515,5.83899223373756,1.39300866608867,2.05782136407943,1.79130840136644,0,0,0,0.828503090142008,1.64168241986767,2.16074473753218,0.473489471170421,0.983821158737019,1.3884040159864,0.465067889500816,0.804820204198858,0.116765342367169,0.16455984991348,1.31333971263276,0.486412857275134,1.16959989940266,1.53685080703735,0.939444931322602,3.57492912559016,1.74937841044784,1.32167513193519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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:327812 | |||
|HGNC= | |||
|MCL_coexpression_id=13 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENSMUST00000145794,NR_038032_5end | |||
|cluster_id=chr10:105011594..105011622,+ | |||
|description=CAGE_peak_1_at_Gm15663_5end | |||
|id=chr10:105011594..105011622,+ | |||
|ontology_enrichment_celltype=CL:0000540!2.10e-10!33;CL:0000047!2.10e-10!33;CL:0000031!2.10e-10!33;CL:0000404!2.10e-10!33;CL:0000117!1.54e-08!23;CL:0000337!1.54e-08!23;CL:0000393!8.87e-08!39;CL:0000211!8.87e-08!39;CL:0002319!3.74e-07!43;CL:0000221!5.06e-07!44;CL:0000133!5.06e-07!44 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,8.93e-11,33;CL:0000047,8.93e-11,33;CL:0000031,8.93e-11,33;CL:0000404,8.93e-11,33;CL:0000117,4.93e-09,23;CL:0000337,4.93e-09,23;CL:0000393,1.56e-07,39;CL:0000211,1.56e-07,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.07e-21!73;UBERON:0005743!2.07e-21!73;UBERON:0000073!2.19e-20!75;UBERON:0001016!2.19e-20!75;UBERON:0002346!2.25e-17!71;UBERON:0003075!2.25e-17!71;UBERON:0007284!2.25e-17!71;UBERON:0004121!5.45e-17!102;UBERON:0000924!5.45e-17!102;UBERON:0006601!5.45e-17!102;UBERON:0001049!7.90e-17!52;UBERON:0005068!7.90e-17!52;UBERON:0006241!7.90e-17!52;UBERON:0007135!7.90e-17!52;UBERON:0000033!1.51e-15!63;UBERON:0000955!5.12e-15!50;UBERON:0006238!5.12e-15!50;UBERON:0002616!1.72e-14!49;UBERON:0003056!1.28e-13!49;UBERON:0002020!3.11e-13!34;UBERON:0003080!1.22e-12!40;UBERON:0002780!4.35e-12!39;UBERON:0001890!4.35e-12!39;UBERON:0006240!4.35e-12!39;UBERON:0002791!1.10e-10!29;UBERON:0003528!1.10e-10!29;UBERON:0001893!1.10e-10!29;UBERON:0000468!5.11e-10!333;UBERON:0000922!1.65e-08!328;UBERON:0002021!2.10e-07!10;UBERON:0000411!2.10e-07!10;UBERON:0001950!2.10e-07!10;UBERON:0000025!3.48e-07!114;UBERON:0002619!5.21e-07!17;UBERON:0000956!6.61e-07!21;UBERON:0001869!6.61e-07!21;UBERON:0000203!6.61e-07!21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,8.60e-22,73;UBERON:0001016,2.16e-20,75;UBERON:0002346,4.38e-20,64;UBERON:0003075,4.38e-20,64;UBERON:0007284,4.38e-20,64;UBERON:0000073,6.00e-18,54;UBERON:0001049,1.30e-17,52;UBERON:0005068,1.30e-17,52;UBERON:0006241,1.30e-17,52;UBERON:0007135,1.30e-17,52;UBERON:0004121,1.33e-17,95;UBERON:0000924,1.33e-17,95;UBERON:0006601,1.33e-17,95;UBERON:0010371,9.70e-17,73;UBERON:0000955,1.25e-14,47;UBERON:0006238,1.25e-14,47;UBERON:0003056,3.65e-14,49;UBERON:0002616,4.62e-14,46;UBERON:0002020,6.26e-14,34;UBERON:0003080,4.92e-13,40;UBERON:0002780,1.98e-12,39;UBERON:0001890,1.98e-12,39;UBERON:0006240,1.98e-12,39;UBERON:0003528,4.06e-11,29;UBERON:0002791,4.06e-11,29;UBERON:0001893,4.06e-11,29;UBERON:0010314,6.56e-11,92;UBERON:0002021,4.34e-08,10;UBERON:0000411,4.34e-08,10;UBERON:0001950,4.34e-08,10;UBERON:0002619,2.43e-07,17;UBERON:0000922,5.63e-07,320;UBERON:0000956,5.70e-07,21;UBERON:0001869,5.70e-07,21;UBERON:0000203,5.70e-07,21 | |||
|phase1_expression=2.24208385946712,0,0.454999239389536,0.30246421130683,0,0,0,0,0.140788722151667,0,0,0,0,0,0.333109761815663,0,0,0,0.137114433605739,0,1.19060606211498,0,0,0,0.22940928106717,0,0,0.430942465371778,0.380046838912748,0,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0.125896817975577,0.405507724878058,0.550640256485045,0,0.65407546914134,1.09843091367236,0.58328969722285,0.55994568650145,1.43752564364972,0,0,0,1.02903774414379,0.286533439938757,0.515672092277442,4.24864567805155,4.7609188134483,7.60597684207415,0,0.889294796111139,0.449949858640699,0,0.7104801149461,0.599200221036809,1.15265491596466,0.622137673850866,1.35005938331691,1.47227472945967,3.14216082844184,2.87129103237098,2.44981598429908,2.01275489138296,1.83843757322004,1.10115880999389,5.10749352340751,5.22262213071228,6.85808696197008,6.40413505216868,5.73004707612436,4.4669279840221,1.68828783009504,5.65353516774197,4.41942878210502,5.83723891276322,7.64237727883732,0.454357159999104,0.453429360640713,2.31891590961342,0,0.679971333707751,0,0.649776417447669,0.448026887097336,0.421333260395256,0,0,0,0.985903938436763,0,0,0,0,0,0,0.45673551887624,0.258937883647172,0.742210695324124,2.08182392119363,0.608930956624282,0.461230994512117,0.753613202763113,0.705532242814229,1.38233250462643,0,1.73519228303894,0,1.29413479957927,0.883366073841574,2.90925151881133,0,5.85561594023094,3.35114730901528,0.510914110417183,0.239630249011841,0,0.254140454146129,5.24267237916879,6.8625090422794,3.39266750704734,6.95297280769106,3.06858548796397,5.40248915854856,3.24482526135515,1.93494791315601,1.49288364732112,3.28539585963777,2.31486041475121,1.17108398666433,1.37941262660084,2.34080768746954,1.9591626318643,1.7009124787832,2.562274405697,1.49922759295566,2.32833033665114,1.29340795759705,5.10586416453112,6.68614271823006,4.3839146485515,5.83899223373756,1.39300866608867,2.05782136407943,1.79130840136644,0,0,0,0.828503090142008,1.64168241986767,2.16074473753218,0.473489471170421,0.983821158737019,1.3884040159864,0.465067889500816,0.804820204198858,0.116765342367169,0.16455984991348,1.31333971263276,0.486412857275134,1.16959989940266,1.53685080703735,0.939444931322602,3.57492912559016,1.74937841044784,1.32167513193519,0.528901133327089,2.98603550749328,2.09013004674395,2.06187938115349,2.01683524623343,1.55664630691409,0.951128130562796,0.949058123089023,0.988193728344065,1.25667604400135,1.59165177632921,1.75467678407208,1.79763881730844,1.08069024937347,0.796565093017469,1.51734320762465,2.05647322697512,4.50830942692322,2.03651327845314,1.35766741017338,0.911765658574141,1.45444035385792,0.738050739898011,0.156998727841375,0.370191491765402,0,0.500535317148282,0.393117990226406,0.224862112384854,0.202860121388503,0,0,0,0.486405680325106,0,0,0.372140947668503,0.312037673114561,0.252578877947112,0,0.482443521363367,2.77129785249907,3.03186258832776,1.62964976442026,1.69745085775188,1.40814148973101,1.34005005953453,1.42826184531608,1.75620283072019,2.83743259391144,1.7717175171902,1.91345722388985,1.96635977658886,2.41758974612254,2.4590339958857,0,0,0,1.37968373152366,8.0275294993896,5.97779601620236,0,0.504941854408746,1.89304931649754,3.51394869866975,3.66219776145758,0.716906393857656,3.56477878531831,1.13230612315533,1.61924280669958,3.21481443702443,4.74345333535828,4.4984984299053,1.70328102249922,1.95872164033981,1.30309567482861,2.14461159864296,0,0.971122544619926,0.302323556964751,0.377210159511796,1.77181135728464,0.922305443831782,0.258428293168221,1.09060118843252,1.42598951353889,0.316036757935816,2.10837217149998,0,1.02131881726136,1.98067203434441,1.68166288917581,2.35770738534752,2.48276327099183,2.31879462882692,2.13913726782757,0.608929898229199,0.704015124191131,0.21183207086382,0.882113592219848,0,1.45317984026315,1.02531972377865,0.716234064018819,0.656563598980245,0.874442509889552,6.67531087237835,0,1.857481811669,0.555583582109135,0.188368457004691,0.136694227721025,0,0.339956859987711,0.279902904647316,0.552799895217695,0,3.00519193902079,1.62655573701479,2.37611749807963,2.29997125615916,1.74690050996942,2.29269388854195,1.1571483801547,1.83229159388821,1.29614973291793,1.24267862617385,0.56369293868419,1.19613236835183,0.827292452285488,2.33341426012857,2.19571699912143,2.87225413334323,2.46450201156083,1.0416350787516,0.524296722128554,0.724752362478018,0.576060012515731,0.316011120628178,2.22997736819181,1.33524244314275,0,0.716106782669926,0,0,0.147689527174577,0.302899349844443,0,0,0.194915761479505,0.0962118416403295,0,0.453460767230423,0,0,0,0.19318959403219,0.375364950902364,2.01466786693992,0.643105137237198,1.00314420807073,7.90652579663893,7.82552902062201,4.58316410751517,4.46818274093588,6.85082519770642,6.0431511791176,6.75022500231806,4.95353323546643,5.89085131679466,4.14208249401456,1.97195960409936,2.39414924040619,3.92687293234509,2.18796045361465,2.09613162627982,2.38996560985018,2.44471400581777,3.7086310303001,3.85103051510178,3.03236654116557,2.02783439912192,0.943131706930381,2.43467919421694,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| |||
|short_description=p1@Gm15663 | |||
}} |
Revision as of 19:52, 3 August 2015
Short description: | p1@Gm15663 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Gm15663_5end |
Coexpression cluster: | MCL_coexpression_mm9:13 |
Association with transcript: | 0bp_to_ENSMUST00000145794, NR_038032_5end |
EntrezGene: | 327812 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 8.93e-11 | 33 |
neuronal stem cell | 8.93e-11 | 33 |
neuroblast | 8.93e-11 | 33 |
electrically signaling cell | 8.93e-11 | 33 |
CNS neuron (sensu Vertebrata) | 4.93e-09 | 23 |
neuroblast (sensu Vertebrata) | 4.93e-09 | 23 |
electrically responsive cell | 1.56e-07 | 39 |
electrically active cell | 1.56e-07 | 39 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 8.60e-22 | 73 |
nervous system | 2.16e-20 | 75 |
neurectoderm | 4.38e-20 | 64 |
neural plate | 4.38e-20 | 64 |
presumptive neural plate | 4.38e-20 | 64 |
regional part of nervous system | 6.00e-18 | 54 |
neural tube | 1.30e-17 | 52 |
neural rod | 1.30e-17 | 52 |
future spinal cord | 1.30e-17 | 52 |
neural keel | 1.30e-17 | 52 |
ectoderm-derived structure | 1.33e-17 | 95 |
ectoderm | 1.33e-17 | 95 |
presumptive ectoderm | 1.33e-17 | 95 |
ecto-epithelium | 9.70e-17 | 73 |
brain | 1.25e-14 | 47 |
future brain | 1.25e-14 | 47 |
pre-chordal neural plate | 3.65e-14 | 49 |
regional part of brain | 4.62e-14 | 46 |
gray matter | 6.26e-14 | 34 |
anterior neural tube | 4.92e-13 | 40 |
regional part of forebrain | 1.98e-12 | 39 |
forebrain | 1.98e-12 | 39 |
future forebrain | 1.98e-12 | 39 |
brain grey matter | 4.06e-11 | 29 |
regional part of telencephalon | 4.06e-11 | 29 |
telencephalon | 4.06e-11 | 29 |
structure with developmental contribution from neural crest | 6.56e-11 | 92 |
occipital lobe | 4.34e-08 | 10 |
visual cortex | 4.34e-08 | 10 |
neocortex | 4.34e-08 | 10 |
regional part of cerebral cortex | 2.43e-07 | 17 |
embryo | 5.63e-07 | 320 |
cerebral cortex | 5.70e-07 | 21 |
cerebral hemisphere | 5.70e-07 | 21 |
pallium | 5.70e-07 | 21 |