FFCP PHASE1:Mm9::chr7:104936999..104937092,+: Difference between revisions
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{{FFCP|EntrezGene=18479|HGNC=|MCL_coexpression_id=3585|UniProt=G3XA44,Q9R2B2|association_with_transcript=0bp_to_ENSMUST00000172423,uc009iju.1_5end|description=CAGE_peak_2_at_Pak1_5end|id=chr7:104936999..104937092,+|ontology_enrichment_celltype=CL:0002321!4.66e-14!70;CL:0000220!4.66e-14!70;CL:0000221!1.32e-13!44;CL:0000133!1.32e-13!44;CL:0002319!1.85e-13!43;CL:0000540!9.33e-13!33;CL:0000047!9.33e-13!33;CL:0000031!9.33e-13!33;CL:0000404!9.33e-13!33;CL:0000117!5.24e-12!23;CL:0000337!5.24e-12!23;CL:0000055!1.02e-10!50;CL:0000393!1.36e-10!39;CL:0000211!1.36e-10!39;CL:0002076!4.83e-07!15|ontology_enrichment_celltype_v019_2=CL:0002321,3.87e-14,70;CL:0000221,1.28e-13,44;CL:0000133,1.28e-13,44;CL:0002319,1.79e-13,43;CL:0000540,9.05e-13,33;CL:0000047,9.05e-13,33;CL:0000031,9.05e-13,33;CL:0000404,9.05e-13,33;CL:0000117,5.10e-12,23;CL:0000337,5.10e-12,23;CL:0000393,1.32e-10,39;CL:0000211,1.32e-10,39;CL:0002076,4.76e-07,15|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!3.34e-25!73;UBERON:0005743!3.34e-25!73;UBERON:0000073!3.37e-25!75;UBERON:0001016!3.37e-25!75;UBERON:0004121!4.20e-22!102;UBERON:0000924!4.20e-22!102;UBERON:0006601!4.20e-22!102;UBERON:0000955!2.84e-18!50;UBERON:0006238!2.84e-18!50;UBERON:0001049!3.45e-18!52;UBERON:0005068!3.45e-18!52;UBERON:0006241!3.45e-18!52;UBERON:0007135!3.45e-18!52;UBERON:0002616!1.41e-17!49;UBERON:0002346!2.08e-17!71;UBERON:0003075!2.08e-17!71;UBERON:0007284!2.08e-17!71;UBERON:0000033!3.96e-17!63;UBERON:0002020!3.18e-14!34;UBERON:0003080!8.12e-14!40;UBERON:0003056!1.93e-13!49;UBERON:0002780!3.11e-13!39;UBERON:0001890!3.11e-13!39;UBERON:0006240!3.11e-13!39;UBERON:0002791!2.03e-12!29;UBERON:0003528!2.03e-12!29;UBERON:0001893!2.03e-12!29;UBERON:0000064!3.87e-09!99;UBERON:0000344!1.45e-08!15;UBERON:0000956!2.57e-08!21;UBERON:0001869!2.57e-08!21;UBERON:0000203!2.57e-08!21;UBERON:0001242!1.19e-07!13;UBERON:0000060!1.19e-07!13;UBERON:0001262!1.19e-07!13;UBERON:0004786!1.19e-07!13;UBERON:0007811!1.21e-07!86;UBERON:0000153!4.01e-07!94;UBERON:0002619!7.23e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.13e-25,73;UBERON:0001016,3.16e-25,75;UBERON:0004121,6.82e-23,95;UBERON:0000924,6.82e-23,95;UBERON:0006601,6.82e-23,95;UBERON:0000073,1.40e-19,54;UBERON:0002346,1.52e-18,64;UBERON:0003075,1.52e-18,64;UBERON:0007284,1.52e-18,64;UBERON:0001049,3.30e-18,52;UBERON:0005068,3.30e-18,52;UBERON:0006241,3.30e-18,52;UBERON:0007135,3.30e-18,52;UBERON:0010371,3.99e-17,73;UBERON:0000955,2.73e-16,47;UBERON:0006238,2.73e-16,47;UBERON:0002616,1.29e-15,46;UBERON:0002020,3.07e-14,34;UBERON:0003080,7.86e-14,40;UBERON:0003056,1.86e-13,49;UBERON:0002780,3.01e-13,39;UBERON:0001890,3.01e-13,39;UBERON:0006240,3.01e-13,39;UBERON:0003528,1.97e-12,29;UBERON:0002791,1.97e-12,29;UBERON:0001893,1.97e-12,29;UBERON:0000160,1.46e-11,31;UBERON:0011216,5.05e-11,194;UBERON:0000344,1.43e-08,15;UBERON:0000956,2.52e-08,21;UBERON:0001869,2.52e-08,21;UBERON:0000203,2.52e-08,21;UBERON:0005409,7.94e-08,47;UBERON:0001242,1.17e-07,13;UBERON:0001262,1.17e-07,13;UBERON:0004786,1.17e-07,13;UBERON:0002619,7.12e-07,17;UBERON:0010314,7.40e-07,92|phase1_expression=14.0930985452219,70.1440569355116,63.699893514535,137.016287721994,136.744534275353,31.8970616632591,41.5830500260036,0.387369970324729,29.0024767632433,26.6833560007073,0.171217968225505,0.239316476986009,0,0,2.99798785634096,1.61980213911861,1.39912375625629,1.10411757875383,0.685572168028694,0.84877930359606,13.9470995847754,0.496454756004426,0.522399578277871,39.5181284299714,30.970252944068,40.7704694521664,39.6301036466349,40.0776492795754,62.7077284206034,50.910086211506,21.2861290229093,0,0,0,22.5304263405994,15.1273527276228,15.9252097884648,10.4632907684227,7.813353445238,12.0410461113974,22.3527965451785,18.442228093878,16.9928623560904,9.06457089424156,7.90740063512214,9.36088436024576,3.9119567217402,26.381043922034,19.552070263368,12.8323733389027,16.2384249085421,33.0630898039435,0.335565212115473,2.90144856804538,1.34437519656986,7.20326420900652,3.72493471920384,2.57836046138721,49.1628999888823,42.3192783417626,43.7343668419264,7.45457970552091,6.22506357277798,9.44894703145469,7.9109309005358,6.3943210345149,11.3848041996994,12.2949857702897,24.4707485048007,21.4659441947388,23.3460707100034,24.5659846587271,21.4242484723065,26.8254850280749,21.3735400370667,33.0918763179608,69.3730050296149,65.2482297615309,62.3642525020349,56.5792174362532,45.103408295988,46.3612899795516,50.2529398202486,35.4540444319958,53.3265884741067,20.6240009831567,23.7760706934502,33.7382996943794,9.76867893998074,11.3357340160178,6.95674772884027,0,0,0.539703191637817,0,0.448026887097336,7.72444310724635,17.8951838706961,12.2099422163348,17.666978725517,14.2251853974447,17.9657068380045,12.7402619853323,21.3320010945999,25.329451798312,24.8292668165597,24.2651733607096,14.5013527243206,8.2860122767095,8.90652834388949,6.24547176358089,8.52503339273995,8.07154240396205,6.63179618431539,8.81915303517786,10.8073268543521,15.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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:18479 | |||
|HGNC= | |||
|MCL_coexpression_id=3585 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:G3XA44,uniprot:Q9R2B2 | |||
|association_with_transcript=0bp_to_ENSMUST00000172423,uc009iju.1_5end | |||
|cluster_id=chr7:104936999..104937092,+ | |||
|description=CAGE_peak_2_at_Pak1_5end | |||
|id=chr7:104936999..104937092,+ | |||
|ontology_enrichment_celltype=CL:0002321!4.66e-14!70;CL:0000220!4.66e-14!70;CL:0000221!1.32e-13!44;CL:0000133!1.32e-13!44;CL:0002319!1.85e-13!43;CL:0000540!9.33e-13!33;CL:0000047!9.33e-13!33;CL:0000031!9.33e-13!33;CL:0000404!9.33e-13!33;CL:0000117!5.24e-12!23;CL:0000337!5.24e-12!23;CL:0000055!1.02e-10!50;CL:0000393!1.36e-10!39;CL:0000211!1.36e-10!39;CL:0002076!4.83e-07!15 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,3.87e-14,70;CL:0000221,1.28e-13,44;CL:0000133,1.28e-13,44;CL:0002319,1.79e-13,43;CL:0000540,9.05e-13,33;CL:0000047,9.05e-13,33;CL:0000031,9.05e-13,33;CL:0000404,9.05e-13,33;CL:0000117,5.10e-12,23;CL:0000337,5.10e-12,23;CL:0000393,1.32e-10,39;CL:0000211,1.32e-10,39;CL:0002076,4.76e-07,15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!3.34e-25!73;UBERON:0005743!3.34e-25!73;UBERON:0000073!3.37e-25!75;UBERON:0001016!3.37e-25!75;UBERON:0004121!4.20e-22!102;UBERON:0000924!4.20e-22!102;UBERON:0006601!4.20e-22!102;UBERON:0000955!2.84e-18!50;UBERON:0006238!2.84e-18!50;UBERON:0001049!3.45e-18!52;UBERON:0005068!3.45e-18!52;UBERON:0006241!3.45e-18!52;UBERON:0007135!3.45e-18!52;UBERON:0002616!1.41e-17!49;UBERON:0002346!2.08e-17!71;UBERON:0003075!2.08e-17!71;UBERON:0007284!2.08e-17!71;UBERON:0000033!3.96e-17!63;UBERON:0002020!3.18e-14!34;UBERON:0003080!8.12e-14!40;UBERON:0003056!1.93e-13!49;UBERON:0002780!3.11e-13!39;UBERON:0001890!3.11e-13!39;UBERON:0006240!3.11e-13!39;UBERON:0002791!2.03e-12!29;UBERON:0003528!2.03e-12!29;UBERON:0001893!2.03e-12!29;UBERON:0000064!3.87e-09!99;UBERON:0000344!1.45e-08!15;UBERON:0000956!2.57e-08!21;UBERON:0001869!2.57e-08!21;UBERON:0000203!2.57e-08!21;UBERON:0001242!1.19e-07!13;UBERON:0000060!1.19e-07!13;UBERON:0001262!1.19e-07!13;UBERON:0004786!1.19e-07!13;UBERON:0007811!1.21e-07!86;UBERON:0000153!4.01e-07!94;UBERON:0002619!7.23e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.13e-25,73;UBERON:0001016,3.16e-25,75;UBERON:0004121,6.82e-23,95;UBERON:0000924,6.82e-23,95;UBERON:0006601,6.82e-23,95;UBERON:0000073,1.40e-19,54;UBERON:0002346,1.52e-18,64;UBERON:0003075,1.52e-18,64;UBERON:0007284,1.52e-18,64;UBERON:0001049,3.30e-18,52;UBERON:0005068,3.30e-18,52;UBERON:0006241,3.30e-18,52;UBERON:0007135,3.30e-18,52;UBERON:0010371,3.99e-17,73;UBERON:0000955,2.73e-16,47;UBERON:0006238,2.73e-16,47;UBERON:0002616,1.29e-15,46;UBERON:0002020,3.07e-14,34;UBERON:0003080,7.86e-14,40;UBERON:0003056,1.86e-13,49;UBERON:0002780,3.01e-13,39;UBERON:0001890,3.01e-13,39;UBERON:0006240,3.01e-13,39;UBERON:0003528,1.97e-12,29;UBERON:0002791,1.97e-12,29;UBERON:0001893,1.97e-12,29;UBERON:0000160,1.46e-11,31;UBERON:0011216,5.05e-11,194;UBERON:0000344,1.43e-08,15;UBERON:0000956,2.52e-08,21;UBERON:0001869,2.52e-08,21;UBERON:0000203,2.52e-08,21;UBERON:0005409,7.94e-08,47;UBERON:0001242,1.17e-07,13;UBERON:0001262,1.17e-07,13;UBERON:0004786,1.17e-07,13;UBERON:0002619,7.12e-07,17;UBERON:0010314,7.40e-07,92 | |||
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| |||
|short_description=p2@Pak1 | |||
}} |
Revision as of 19:56, 3 August 2015
Short description: | p2@Pak1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Pak1_5end |
Coexpression cluster: | MCL_coexpression_mm9:3585 |
Association with transcript: | 0bp_to_ENSMUST00000172423, uc009iju.1_5end |
EntrezGene: | 18479 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 3.87e-14 | 70 |
ectodermal cell | 1.28e-13 | 44 |
neurectodermal cell | 1.28e-13 | 44 |
neural cell | 1.79e-13 | 43 |
neuron | 9.05e-13 | 33 |
neuronal stem cell | 9.05e-13 | 33 |
neuroblast | 9.05e-13 | 33 |
electrically signaling cell | 9.05e-13 | 33 |
CNS neuron (sensu Vertebrata) | 5.10e-12 | 23 |
neuroblast (sensu Vertebrata) | 5.10e-12 | 23 |
electrically responsive cell | 1.32e-10 | 39 |
electrically active cell | 1.32e-10 | 39 |
endo-epithelial cell | 4.76e-07 | 15 |