FFCP PHASE1:Mm9::chr7:107793432..107793445,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=270 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr7:107793432..107793445,- | |||
|description=CAGE_peak_at_chr7:107793432..107793445,- | |description=CAGE_peak_at_chr7:107793432..107793445,- | ||
|id=chr7:107793432..107793445,- | |id=chr7:107793432..107793445,- | ||
|ontology_enrichment_celltype=CL:0000221!4.47e-13!44;CL:0000133!4.47e-13!44;CL:0002319!2.84e-12!43;CL:0000540!1.08e-10!33;CL:0000047!1.08e-10!33;CL:0000031!1.08e-10!33;CL:0000404!1.08e-10!33;CL:0000055!1.26e-09!50;CL:0000107!2.07e-09!9;CL:0000393!2.99e-08!39;CL:0000211!2.99e-08!39;CL:0002321!4.48e-08!70;CL:0000220!4.48e-08!70 | |ontology_enrichment_celltype=CL:0000221!4.47e-13!44;CL:0000133!4.47e-13!44;CL:0002319!2.84e-12!43;CL:0000540!1.08e-10!33;CL:0000047!1.08e-10!33;CL:0000031!1.08e-10!33;CL:0000404!1.08e-10!33;CL:0000055!1.26e-09!50;CL:0000107!2.07e-09!9;CL:0000393!2.99e-08!39;CL:0000211!2.99e-08!39;CL:0002321!4.48e-08!70;CL:0000220!4.48e-08!70 | ||
|ontology_enrichment_celltype_v019_2=CL:0000540,1.70e-20,33;CL:0000047,1.70e-20,33;CL:0000031,1.70e-20,33;CL:0000404,1.70e-20,33;CL:0002610,4.51e-19,3;CL:0002614,5.95e-19,3;CL:0002319,1.80e-18,43;CL:0000221,5.08e-18,44;CL:0000133,5.08e-18,44;CL:0000393,3.79e-17,39;CL:0000211,3.79e-17,39;CL:0000117,4.46e-16,23;CL:0000337,4.46e-16,23;CL:0002611,1.10e-12,2;CL:0002321,8.77e-11,70;CL:0000723,6.19e-08,91;CL:0000048,6.19e-08,91;CL:0000034,2.41e-07,97 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!5.32e-26!75;UBERON:0001016!5.32e-26!75;UBERON:0001017!9.00e-26!73;UBERON:0005743!9.00e-26!73;UBERON:0004121!4.79e-23!102;UBERON:0000924!4.79e-23!102;UBERON:0006601!4.79e-23!102;UBERON:0000033!3.87e-18!63;UBERON:0002346!1.22e-17!71;UBERON:0003075!1.22e-17!71;UBERON:0007284!1.22e-17!71;UBERON:0000955!1.03e-15!50;UBERON:0006238!1.03e-15!50;UBERON:0002616!8.24e-15!49;UBERON:0001049!1.07e-14!52;UBERON:0005068!1.07e-14!52;UBERON:0006241!1.07e-14!52;UBERON:0007135!1.07e-14!52;UBERON:0003056!1.16e-10!49;UBERON:0007811!1.21e-10!86;UBERON:0002298!9.43e-10!6;UBERON:0002410!2.07e-09!9;UBERON:0000010!5.82e-09!11;UBERON:0000153!6.07e-09!94;UBERON:0003076!7.92e-09!12;UBERON:0003057!7.92e-09!12;UBERON:0002020!3.54e-08!34;UBERON:0003080!4.56e-08!40;UBERON:0002780!2.49e-07!39;UBERON:0001890!2.49e-07!39;UBERON:0006240!2.49e-07!39;UBERON:0002950!4.13e-07!4;UBERON:0001891!4.13e-07!4;UBERON:0009616!4.13e-07!4 | |ontology_enrichment_uberon=UBERON:0000073!5.32e-26!75;UBERON:0001016!5.32e-26!75;UBERON:0001017!9.00e-26!73;UBERON:0005743!9.00e-26!73;UBERON:0004121!4.79e-23!102;UBERON:0000924!4.79e-23!102;UBERON:0006601!4.79e-23!102;UBERON:0000033!3.87e-18!63;UBERON:0002346!1.22e-17!71;UBERON:0003075!1.22e-17!71;UBERON:0007284!1.22e-17!71;UBERON:0000955!1.03e-15!50;UBERON:0006238!1.03e-15!50;UBERON:0002616!8.24e-15!49;UBERON:0001049!1.07e-14!52;UBERON:0005068!1.07e-14!52;UBERON:0006241!1.07e-14!52;UBERON:0007135!1.07e-14!52;UBERON:0003056!1.16e-10!49;UBERON:0007811!1.21e-10!86;UBERON:0002298!9.43e-10!6;UBERON:0002410!2.07e-09!9;UBERON:0000010!5.82e-09!11;UBERON:0000153!6.07e-09!94;UBERON:0003076!7.92e-09!12;UBERON:0003057!7.92e-09!12;UBERON:0002020!3.54e-08!34;UBERON:0003080!4.56e-08!40;UBERON:0002780!2.49e-07!39;UBERON:0001890!2.49e-07!39;UBERON:0006240!2.49e-07!39;UBERON:0002950!4.13e-07!4;UBERON:0001891!4.13e-07!4;UBERON:0009616!4.13e-07!4 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004684,4.51e-19,3;UBERON:0002275,4.51e-19,3;UBERON:0002038,5.95e-19,3;UBERON:0009663,5.95e-19,3;UBERON:0009661,5.95e-19,3;UBERON:0000125,5.95e-19,3;UBERON:0002308,5.95e-19,3;UBERON:0001017,1.17e-16,73;UBERON:0001016,3.58e-16,75;UBERON:0002950,2.28e-14,4;UBERON:0001891,2.28e-14,4;UBERON:0009616,2.28e-14,4;UBERON:0010286,2.28e-14,4;UBERON:0002256,1.10e-12,2;UBERON:0004121,2.01e-12,95;UBERON:0000924,2.01e-12,95;UBERON:0006601,2.01e-12,95;UBERON:0000073,6.73e-10,54;UBERON:0002240,1.58e-09,6;UBERON:0005174,1.58e-09,6;UBERON:0001137,1.58e-09,6;UBERON:0000013,1.73e-08,3;UBERON:0003076,3.83e-08,12;UBERON:0003057,3.83e-08,12;UBERON:0002420,1.92e-07,8;UBERON:0007245,1.92e-07,8;UBERON:0010009,1.92e-07,8;UBERON:0010011,1.92e-07,8;UBERON:0000454,1.92e-07,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0.219686182734472,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.599200221036809,1.92109152660777,0,0,0,2.28520787523043,1.32521124570968,0,0,0,6.60695285996332,2.17068474744819,2.91852413186863,0,0.0914876436024097,0,4.74611098302348,2.25105044012672,2.29197371665215,0,0.569486723196412,0,0.075726193333184,0,0,0,0,0.539703191637817,0.649776417447669,0.896053774194671,0.421333260395256,0,0,0,0.422530259330042,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0,0,0,0,0,0,0,0.161766849947409,0,0,0,0.878342391034642,0.628340120440365,0,0,0,0,0.748953197024114,0.915001205637253,0,0.347648640384553,0,1.0389402227978,0.973447578406546,0,0,0,0.210441855886474,0,0,0,0.150704817835715,0.0680364991513279,0.12811372028485,0.0937017245597288,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198956472041151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.554259570499814,0,0,0,0.234690248288502,0.335012514883631,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0,1.76605648986571,0.937693492737625,0,0,0.94652465824877,1.17131623288992,0.861693590931196,0.238968797952552,0.668396022247182,0.283076530788832,0,1.16902343164525,1.58115111178609,0.642642632843614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0,0,0,0.304464949114599,0,0,0,0,0,0,0,0,0,2.41052892613663,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0.108005340821801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.920650473014354,0,0.343706364687375,0.685082519770642,0.755393897389701,0.675022500231806,0.900642406448441,0.453142408984205,0,0,0,0,0,0,0,0,0,0.320919209591815,0,0,0,0,0.0640251524048693,0,0,0,0,0,0.147198920134397,0,0.177475806159338,0.238436189947321,0,0,0.0846146078916765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0.219686182734472,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.599200221036809,1.92109152660777,0,0,0,2.28520787523043,1.32521124570968,0,0,0,6.60695285996332,2.17068474744819,2.91852413186863,0,0.0914876436024097,0,4.74611098302348,2.25105044012672,2.29197371665215,0,0.569486723196412,0,0.075726193333184,0,0,0,0,0.539703191637817,0.649776417447669,0.896053774194671,0.421333260395256,0,0,0,0.422530259330042,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0,0,0,0,0,0,0,0.161766849947409,0,0,0,0.878342391034642,0.628340120440365,0,0,0,0,0.748953197024114,0.915001205637253,0,0.347648640384553,0,1.0389402227978,0.973447578406546,0,0,0,0.210441855886474,0,0,0,0.150704817835715,0.0680364991513279,0.12811372028485,0.0937017245597288,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198956472041151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.554259570499814,0,0,0,0.234690248288502,0.335012514883631,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0,1.76605648986571,0.937693492737625,0,0,0.94652465824877,1.17131623288992,0.861693590931196,0.238968797952552,0.668396022247182,0.283076530788832,0,1.16902343164525,1.58115111178609,0.642642632843614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0,0,0,0.304464949114599,0,0,0,0,0,0,0,0,0,2.41052892613663,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0.108005340821801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.920650473014354,0,0.343706364687375,0.685082519770642,0.755393897389701,0.675022500231806,0.900642406448441,0.453142408984205,0,0,0,0,0,0,0,0,0,0.320919209591815,0,0,0,0,0.0640251524048693,0,0,0,0,0,0.147198920134397,0,0.177475806159338,0.238436189947321,0,0,0.0846146078916765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr7:107793432..107793445,- | |short_description=p@chr7:107793432..107793445,- | ||
}} | }} |
Latest revision as of 21:45, 3 August 2015
Short description: | p@chr7:107793432..107793445, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:107793432..107793445, - |
Coexpression cluster: | MCL_coexpression_mm9:270 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 1.70e-20 | 33 |
neuronal stem cell | 1.70e-20 | 33 |
neuroblast | 1.70e-20 | 33 |
electrically signaling cell | 1.70e-20 | 33 |
raphe nuclei neuron | 4.51e-19 | 3 |
neuron of the substantia nigra | 5.95e-19 | 3 |
neural cell | 1.80e-18 | 43 |
ectodermal cell | 5.08e-18 | 44 |
neurectodermal cell | 5.08e-18 | 44 |
electrically responsive cell | 3.79e-17 | 39 |
electrically active cell | 3.79e-17 | 39 |
CNS neuron (sensu Vertebrata) | 4.46e-16 | 23 |
neuroblast (sensu Vertebrata) | 4.46e-16 | 23 |
neuron of the dorsal spinal cord | 1.10e-12 | 2 |
embryonic cell | 8.77e-11 | 70 |
somatic stem cell | 6.19e-08 | 91 |
multi fate stem cell | 6.19e-08 | 91 |
stem cell | 2.41e-07 | 97 |
Ontology term | p-value | n |
---|---|---|
raphe nuclei | 4.51e-19 | 3 |
reticular formation | 4.51e-19 | 3 |
substantia nigra | 5.95e-19 | 3 |
telencephalic nucleus | 5.95e-19 | 3 |
midbrain nucleus | 5.95e-19 | 3 |
neural nucleus | 5.95e-19 | 3 |
nucleus of brain | 5.95e-19 | 3 |
central nervous system | 1.17e-16 | 73 |
nervous system | 3.58e-16 | 75 |
regional part of midbrain | 2.28e-14 | 4 |
midbrain | 2.28e-14 | 4 |
presumptive midbrain | 2.28e-14 | 4 |
midbrain neural tube | 2.28e-14 | 4 |
dorsal horn of spinal cord | 1.10e-12 | 2 |
ectoderm-derived structure | 2.01e-12 | 95 |
ectoderm | 2.01e-12 | 95 |
presumptive ectoderm | 2.01e-12 | 95 |
regional part of nervous system | 6.73e-10 | 54 |
spinal cord | 1.58e-09 | 6 |
dorsal region element | 1.58e-09 | 6 |
dorsum | 1.58e-09 | 6 |
sympathetic nervous system | 1.73e-08 | 3 |
posterior neural tube | 3.83e-08 | 12 |
chordal neural plate | 3.83e-08 | 12 |
basal ganglion | 1.92e-07 | 8 |
nuclear complex of neuraxis | 1.92e-07 | 8 |
aggregate regional part of brain | 1.92e-07 | 8 |
collection of basal ganglia | 1.92e-07 | 8 |
cerebral subcortex | 1.92e-07 | 8 |