FFCP PHASE1:Mm9::chr8:70434810..70434834,-: Difference between revisions
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{{FFCP|EntrezGene=234353|HGNC=|MCL_coexpression_id=0|UniProt=Q2PFD7|association_with_transcript=0bp_to_ENSMUST00000093468_5end|description=CAGE_peak_7_at_Psd3_5end|id=chr8:70434810..70434834,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!3.10e-12!102;UBERON:0000924!3.10e-12!102;UBERON:0006601!3.10e-12!102;UBERON:0002021!1.07e-11!10;UBERON:0000411!1.07e-11!10;UBERON:0001950!1.07e-11!10;UBERON:0001049!3.38e-10!52;UBERON:0005068!3.38e-10!52;UBERON:0006241!3.38e-10!52;UBERON:0007135!3.38e-10!52;UBERON:0002616!4.36e-10!49;UBERON:0000955!8.69e-10!50;UBERON:0006238!8.69e-10!50;UBERON:0000033!1.42e-09!63;UBERON:0001017!1.64e-09!73;UBERON:0005743!1.64e-09!73;UBERON:0000073!4.25e-09!75;UBERON:0001016!4.25e-09!75;UBERON:0002346!9.66e-09!71;UBERON:0003075!9.66e-09!71;UBERON:0007284!9.66e-09!71;UBERON:0002619!7.24e-08!17;UBERON:0002020!7.91e-08!34;UBERON:0003080!1.33e-07!40;UBERON:0000956!1.79e-07!21;UBERON:0001869!1.79e-07!21;UBERON:0000203!1.79e-07!21;UBERON:0002791!3.56e-07!29;UBERON:0003528!3.56e-07!29;UBERON:0001893!3.56e-07!29|ontology_enrichment_uberon_v019_2=UBERON:0002021,7.99e-15,10;UBERON:0000411,7.99e-15,10;UBERON:0001950,7.99e-15,10;UBERON:0000073,5.10e-11,54;UBERON:0001049,8.31e-10,52;UBERON:0005068,8.31e-10,52;UBERON:0006241,8.31e-10,52;UBERON:0007135,8.31e-10,52;UBERON:0001896,9.09e-10,2;UBERON:0002298,9.09e-10,2;UBERON:0005290,9.09e-10,2;UBERON:0010096,9.09e-10,2;UBERON:0002616,2.23e-09,46;UBERON:0000955,3.86e-09,47;UBERON:0006238,3.86e-09,47;UBERON:0001017,5.20e-09,73;UBERON:0001016,1.05e-08,75;UBERON:0002619,1.59e-08,17;UBERON:0002346,1.36e-07,64;UBERON:0003075,1.36e-07,64;UBERON:0007284,1.36e-07,64;UBERON:0003080,3.22e-07,40;UBERON:0000956,8.36e-07,21;UBERON:0001869,8.36e-07,21;UBERON:0000203,8.36e-07,21|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.2667532635669,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384218305321555,0,0,0,0,0.220868540951614,0,0,0,0,1.27687338085188,1.22885226604995,0,0,0,0,0,1.22238598221448,0,0.142371680799103,0,0,0,0,0,0,0,0,0,1.82577746171277,0,0,0,0.14084341977668,0,0,0,0,0,0,1.48439043634778,0,0,0,0,0.230615497256059,0.301445281105245,0,0,0,0,0,0.161766849947409,0,0,0,0,0,0,0,0,0,1.04853447583376,0.457500602818626,0,0.695297280769106,1.02286182932132,0.83115217823824,2.59586020908412,0,0,0,0,0,0,0,0,0,0,0,0.517406741478031,0,0,0,0.219195732427575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.630869845692382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234690248288502,0,0,0,0,0,0,0,0,0,0,0,0,0,1.76605648986571,3.16471553798949,0,0,0,0,0,0,0.668396022247182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0.16488625294148,0,0.0603129249281559,0.358117032009409,0.328281799490123,0.291480836629851,2.78137953015765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,81.1717831705234,0,0,0,0,0,0,0,0,1.69108884578204,52.9975211514472,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0,0,0,0,1.12950368523413,0,0,0.171853182343688,2.74033007908257,1.5107877947794,3.37511250115903,0.45032120322422,1.81256963593682,1.03552062350364,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0.192909220463705,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0985044823755635,0,0,0,0,0,0,0,0,0.231867835620421|short_description=p7@Psd3}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:234353 | |||
|HGNC= | |||
|MCL_coexpression_id=0 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q2PFD7 | |||
|association_with_transcript=0bp_to_ENSMUST00000093468_5end | |||
|cluster_id=chr8:70434810..70434834,- | |||
|description=CAGE_peak_7_at_Psd3_5end | |||
|id=chr8:70434810..70434834,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!3.10e-12!102;UBERON:0000924!3.10e-12!102;UBERON:0006601!3.10e-12!102;UBERON:0002021!1.07e-11!10;UBERON:0000411!1.07e-11!10;UBERON:0001950!1.07e-11!10;UBERON:0001049!3.38e-10!52;UBERON:0005068!3.38e-10!52;UBERON:0006241!3.38e-10!52;UBERON:0007135!3.38e-10!52;UBERON:0002616!4.36e-10!49;UBERON:0000955!8.69e-10!50;UBERON:0006238!8.69e-10!50;UBERON:0000033!1.42e-09!63;UBERON:0001017!1.64e-09!73;UBERON:0005743!1.64e-09!73;UBERON:0000073!4.25e-09!75;UBERON:0001016!4.25e-09!75;UBERON:0002346!9.66e-09!71;UBERON:0003075!9.66e-09!71;UBERON:0007284!9.66e-09!71;UBERON:0002619!7.24e-08!17;UBERON:0002020!7.91e-08!34;UBERON:0003080!1.33e-07!40;UBERON:0000956!1.79e-07!21;UBERON:0001869!1.79e-07!21;UBERON:0000203!1.79e-07!21;UBERON:0002791!3.56e-07!29;UBERON:0003528!3.56e-07!29;UBERON:0001893!3.56e-07!29 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,7.99e-15,10;UBERON:0000411,7.99e-15,10;UBERON:0001950,7.99e-15,10;UBERON:0000073,5.10e-11,54;UBERON:0001049,8.31e-10,52;UBERON:0005068,8.31e-10,52;UBERON:0006241,8.31e-10,52;UBERON:0007135,8.31e-10,52;UBERON:0001896,9.09e-10,2;UBERON:0002298,9.09e-10,2;UBERON:0005290,9.09e-10,2;UBERON:0010096,9.09e-10,2;UBERON:0002616,2.23e-09,46;UBERON:0000955,3.86e-09,47;UBERON:0006238,3.86e-09,47;UBERON:0001017,5.20e-09,73;UBERON:0001016,1.05e-08,75;UBERON:0002619,1.59e-08,17;UBERON:0002346,1.36e-07,64;UBERON:0003075,1.36e-07,64;UBERON:0007284,1.36e-07,64;UBERON:0003080,3.22e-07,40;UBERON:0000956,8.36e-07,21;UBERON:0001869,8.36e-07,21;UBERON:0000203,8.36e-07,21 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.2667532635669,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384218305321555,0,0,0,0,0.220868540951614,0,0,0,0,1.27687338085188,1.22885226604995,0,0,0,0,0,1.22238598221448,0,0.142371680799103,0,0,0,0,0,0,0,0,0,1.82577746171277,0,0,0,0.14084341977668,0,0,0,0,0,0,1.48439043634778,0,0,0,0,0.230615497256059,0.301445281105245,0,0,0,0,0,0.161766849947409,0,0,0,0,0,0,0,0,0,1.04853447583376,0.457500602818626,0,0.695297280769106,1.02286182932132,0.83115217823824,2.59586020908412,0,0,0,0,0,0,0,0,0,0,0,0.517406741478031,0,0,0,0.219195732427575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.630869845692382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234690248288502,0,0,0,0,0,0,0,0,0,0,0,0,0,1.76605648986571,3.16471553798949,0,0,0,0,0,0,0.668396022247182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0.16488625294148,0,0.0603129249281559,0.358117032009409,0.328281799490123,0.291480836629851,2.78137953015765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,81.1717831705234,0,0,0,0,0,0,0,0,1.69108884578204,52.9975211514472,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0,0,0,0,1.12950368523413,0,0,0.171853182343688,2.74033007908257,1.5107877947794,3.37511250115903,0.45032120322422,1.81256963593682,1.03552062350364,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0.192909220463705,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0985044823755635,0,0,0,0,0,0,0,0,0.231867835620421 | |||
|short_description=p7@Psd3 | |||
}} |
Revision as of 23:39, 3 August 2015
Short description: | p7@Psd3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_Psd3_5end |
Coexpression cluster: | MCL_coexpression_mm9:0 |
Association with transcript: | 0bp_to_ENSMUST00000093468_5end |
EntrezGene: | 234353 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
occipital lobe | 7.99e-15 | 10 |
visual cortex | 7.99e-15 | 10 |
neocortex | 7.99e-15 | 10 |
regional part of nervous system | 5.10e-11 | 54 |
neural tube | 8.31e-10 | 52 |
neural rod | 8.31e-10 | 52 |
future spinal cord | 8.31e-10 | 52 |
neural keel | 8.31e-10 | 52 |
medulla oblongata | 9.09e-10 | 2 |
brainstem | 9.09e-10 | 2 |
myelencephalon | 9.09e-10 | 2 |
future myelencephalon | 9.09e-10 | 2 |
regional part of brain | 2.23e-09 | 46 |
brain | 3.86e-09 | 47 |
future brain | 3.86e-09 | 47 |
central nervous system | 5.20e-09 | 73 |
nervous system | 1.05e-08 | 75 |
regional part of cerebral cortex | 1.59e-08 | 17 |
neurectoderm | 1.36e-07 | 64 |
neural plate | 1.36e-07 | 64 |
presumptive neural plate | 1.36e-07 | 64 |
anterior neural tube | 3.22e-07 | 40 |
cerebral cortex | 8.36e-07 | 21 |
cerebral hemisphere | 8.36e-07 | 21 |
pallium | 8.36e-07 | 21 |