FFCP PHASE1:Mm9::chr11:75570311..75570349,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1991 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:75570311..75570349,+ | |||
|description=CAGE_peak_at_chr11:75570311..75570349,+ | |description=CAGE_peak_at_chr11:75570311..75570349,+ | ||
|id=chr11:75570311..75570349,+ | |id=chr11:75570311..75570349,+ | ||
|ontology_enrichment_celltype=CL:0000055!6.88e-13!50;CL:0002319!6.25e-12!43;CL:0000221!1.50e-11!44;CL:0000133!1.50e-11!44;CL:0000393!5.35e-11!39;CL:0000211!5.35e-11!39;CL:0000117!1.28e-10!23;CL:0000337!1.28e-10!23;CL:0000540!3.02e-09!33;CL:0000047!3.02e-09!33;CL:0000031!3.02e-09!33;CL:0000404!3.02e-09!33;CL:0002321!9.93e-07!70;CL:0000220!9.93e-07!70 | |ontology_enrichment_celltype=CL:0000055!6.88e-13!50;CL:0002319!6.25e-12!43;CL:0000221!1.50e-11!44;CL:0000133!1.50e-11!44;CL:0000393!5.35e-11!39;CL:0000211!5.35e-11!39;CL:0000117!1.28e-10!23;CL:0000337!1.28e-10!23;CL:0000540!3.02e-09!33;CL:0000047!3.02e-09!33;CL:0000031!3.02e-09!33;CL:0000404!3.02e-09!33;CL:0002321!9.93e-07!70;CL:0000220!9.93e-07!70 | ||
|ontology_enrichment_celltype_v019_2=CL:0002319,6.02e-12,43;CL:0000221,1.44e-11,44;CL:0000133,1.44e-11,44;CL:0000393,5.16e-11,39;CL:0000211,5.16e-11,39;CL:0000117,1.24e-10,23;CL:0000337,1.24e-10,23;CL:0000540,2.94e-09,33;CL:0000047,2.94e-09,33;CL:0000031,2.94e-09,33;CL:0000404,2.94e-09,33;CL:0002321,7.19e-07,70 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!3.78e-17!73;UBERON:0005743!3.78e-17!73;UBERON:0000073!4.49e-17!75;UBERON:0001016!4.49e-17!75;UBERON:0002020!1.27e-13!34;UBERON:0004121!3.70e-13!102;UBERON:0000924!3.70e-13!102;UBERON:0006601!3.70e-13!102;UBERON:0001049!1.37e-12!52;UBERON:0005068!1.37e-12!52;UBERON:0006241!1.37e-12!52;UBERON:0007135!1.37e-12!52;UBERON:0002346!2.32e-12!71;UBERON:0003075!2.32e-12!71;UBERON:0007284!2.32e-12!71;UBERON:0000955!2.85e-11!50;UBERON:0006238!2.85e-11!50;UBERON:0002616!3.24e-11!49;UBERON:0002791!6.52e-11!29;UBERON:0003528!6.52e-11!29;UBERON:0001893!6.52e-11!29;UBERON:0002780!1.25e-09!39;UBERON:0001890!1.25e-09!39;UBERON:0006240!1.25e-09!39;UBERON:0003080!2.78e-09!40;UBERON:0000033!2.87e-09!63;UBERON:0003056!5.05e-09!49;UBERON:0000956!1.67e-08!21;UBERON:0001869!1.67e-08!21;UBERON:0000203!1.67e-08!21;UBERON:0000025!1.73e-08!114;UBERON:0002021!4.53e-07!10;UBERON:0000411!4.53e-07!10;UBERON:0001950!4.53e-07!10;UBERON:0002619!4.95e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.23e-17,73;UBERON:0001016,5.02e-17,75;UBERON:0000073,1.02e-13,54;UBERON:0004121,1.11e-13,95;UBERON:0000924,1.11e-13,95;UBERON:0006601,1.11e-13,95;UBERON:0002020,1.22e-13,34;UBERON:0010314,1.64e-13,92;UBERON:0002346,3.63e-13,64;UBERON:0003075,3.63e-13,64;UBERON:0007284,3.63e-13,64;UBERON:0001049,1.55e-12,52;UBERON:0005068,1.55e-12,52;UBERON:0006241,1.55e-12,52;UBERON:0007135,1.55e-12,52;UBERON:0010371,4.52e-11,73;UBERON:0003528,6.30e-11,29;UBERON:0002791,6.30e-11,29;UBERON:0001893,6.30e-11,29;UBERON:0000955,9.54e-10,47;UBERON:0006238,9.54e-10,47;UBERON:0002616,1.09e-09,46;UBERON:0002780,1.43e-09,39;UBERON:0001890,1.43e-09,39;UBERON:0006240,1.43e-09,39;UBERON:0003080,3.16e-09,40;UBERON:0003056,5.65e-09,49;UBERON:0000956,1.63e-08,21;UBERON:0001869,1.63e-08,21;UBERON:0000203,1.63e-08,21;UBERON:0000025,2.29e-08,114;UBERON:0002021,4.44e-07,10;UBERON:0000411,4.44e-07,10;UBERON:0001950,4.44e-07,10;UBERON:0002619,4.85e-07,17 | |||
|phase1_expression=1.92178616525753,0.348975407639361,0.909998478779072,0.60492842261366,0.500895729946347,0.503637815735669,0.934450562382103,0.516493293766305,1.54867594366833,0.936258105287974,0.513653904676515,1.27635454392538,0,0.437102012094987,1.33243904726265,0.607425802169478,0,1.10411757875383,1.23402990245165,0,1.87095238332354,1.98581902401771,1.82839852397255,3.99981056983517,1.60586496747019,1.14846392823004,0.430761996159075,1.72376986148711,1.71021077510736,0.252030129759931,1.55211357458713,0.635030673459631,1.23012957516914,0,0.288851619751275,0.498703936075477,0.408338712524738,1.25559489221072,0.7813353445238,0.523523743973798,0,1.36609096991689,0,3.27331726736501,3.14268486780495,3.30384153891027,3.9119567217402,3.2703773457067,3.51497892375155,4.6663175777828,3.91961980551015,4.31257693094915,1.67782606057736,1.45072428402269,3.02484419228218,8.7468208252222,3.72493471920384,5.67239301505187,4.45096213891115,13.7537654610729,5.07065122804943,1.35537812827653,1.77858959222228,1.7997994345628,6.92206453796882,1.4209602298922,6.2916023208865,7.30014780110954,6.63613518774257,7.2903206699113,3.78584930432488,3.99911378165325,9.27647871996777,3.67472397644862,5.07980996396653,1.83843757322004,6.60695285996332,5.87361755191863,7.83393319606842,4.2203612073662,7.50198677539759,5.73004707612436,5.02529398202486,2.8138130501584,3.97275444219706,11.7851434189467,13.0981946335175,4.47358669980721,2.95332153999418,2.26714680320357,2.31891590961342,0.860423876981386,0,3.77792234146472,4.54843492213368,2.68816132258401,2.94933282276679,2.55645483867087,3.11743205523443,2.47337702157238,1.97180787687353,3.84979432242953,0,0,3.46385665617943,3.54703811665138,6.0662933401774,2.8545969929765,0.776813650941515,2.52351636410202,1.38788261412909,3.65358573974569,3.22861696158482,2.11011696773672,1.99900802130698,2.01066546127481,1.97755974187499,1.87979163995885,3.5384422077995,0.970601099684455,1.10420759230197,1.45462575940567,0,3.80615036115011,3.14170060220183,1.78819938646014,2.15667224110656,1.79970819298022,1.90605340609597,1.9472783122627,2.74500361691176,4.14659361972453,3.30266208365325,3.06858548796397,4.1557608911912,2.59586020908412,1.83310854930569,0.870848794270651,3.28539585963777,1.89397670297827,3.77349284591841,1.37941262660084,3.42118046630164,3.61691562805716,1.97305847538851,4.61209393025459,1.78033276663485,3.3631438196072,3.88022387279116,3.02569728268511,0.527853372491847,2.41115305670332,2.22437799380478,3.1342694986995,2.67516777330327,1.99034266818493,1.40442637462647,0.51469581422943,1.70498099637356,2.27838349789052,4.69052119962192,3.6012412292203,2.60419209143731,3.93528463494808,3.5481435964097,3.0229412817553,4.82892122519315,2.6856028744449,2.46839774870221,3.11918181750281,3.24275238183423,2.19299981137998,1.3173006917463,1.47627060636409,1.26173969138476,6.17427674275707,0.991256348951394,1.05780226665418,3.19932375802851,4.41249676534833,2.96395161040815,2.01683524623343,1.33426826306922,1.33157938278791,2.37264530772256,1.31759163779209,1.75934646160189,1.1937388322469,1.55971269695296,1.79763881730844,1.94524244887225,1.7922714592893,10.0523987505133,3.42745537829186,3.38123207019241,3.46207257337034,1.35766741017338,2.17421041659988,1.13825766823663,1.47610147979602,2.66897837330337,1.23397163921801,1.1858105083486,2.00214126859313,2.75182593158484,2.69834534861824,3.04290182082754,1.68824011826692,1.52775511068852,0.863088412352432,2.43202840162553,1.37280706594041,8.62609239164127,3.34926852901653,1.5601883655728,1.76805214562978,2.15276896226295,2.41221760681684,1.29327233116623,2.08440552947533,2.93336957595647,2.37643120085263,3.28566347603903,2.34508760418542,2.14239276797412,1.56106918286239,1.41871629695572,2.87904096543407,0.797273843287435,1.96635977658886,2.24490476425664,1.73578870297814,6.03165135757089,4.35124547054968,2.45882136509518,1.10374698521893,2.56880943980467,1.87538698547525,4.09837363441689,2.7771801992481,4.10160685241134,6.63745865304285,2.80050417052639,1.91175038362042,2.67358408898873,2.83076530788832,3.23848561339915,1.16902343164525,2.37172666767914,2.89189184779626,2.12910127812403,1.78065603667255,1.30309567482861,1.31976098378028,3.98235415019888,3.15614827001476,3.02323556964751,3.96070667487386,2.06711325016541,1.84461088766356,0.775284879504663,7.27067458955011,2.85197902707777,3.16036757935816,4.21674434299995,5.15677716240934,1.36175842301515,3.6012218806262,4.65691261617916,4.50107773566344,1.59606210278046,3.21063871683727,1.81003922662333,0.913394847343798,3.52007562095566,1.69465656691056,1.10264199027481,3.13283880588812,2.26050197374268,2.0506394475573,1.55184047204077,2.1338316966858,2.04036585640896,4.26478194624172,2.22132145037209,0.82554747185289,1.29636169158798,2.0720530270516,3.14396723758358,2.51655990527175,1.01987057996313,2.09927178485487,1.38199973804424,7.63736494412091,2.05618395827738,1.01659733563424,2.05210147561422,2.29997125615916,2.40198820120795,2.42755823492677,2.47960367176008,1.30877970992015,1.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| |phase1_expression=1.92178616525753,0.348975407639361,0.909998478779072,0.60492842261366,0.500895729946347,0.503637815735669,0.934450562382103,0.516493293766305,1.54867594366833,0.936258105287974,0.513653904676515,1.27635454392538,0,0.437102012094987,1.33243904726265,0.607425802169478,0,1.10411757875383,1.23402990245165,0,1.87095238332354,1.98581902401771,1.82839852397255,3.99981056983517,1.60586496747019,1.14846392823004,0.430761996159075,1.72376986148711,1.71021077510736,0.252030129759931,1.55211357458713,0.635030673459631,1.23012957516914,0,0.288851619751275,0.498703936075477,0.408338712524738,1.25559489221072,0.7813353445238,0.523523743973798,0,1.36609096991689,0,3.27331726736501,3.14268486780495,3.30384153891027,3.9119567217402,3.2703773457067,3.51497892375155,4.6663175777828,3.91961980551015,4.31257693094915,1.67782606057736,1.45072428402269,3.02484419228218,8.7468208252222,3.72493471920384,5.67239301505187,4.45096213891115,13.7537654610729,5.07065122804943,1.35537812827653,1.77858959222228,1.7997994345628,6.92206453796882,1.4209602298922,6.2916023208865,7.30014780110954,6.63613518774257,7.2903206699113,3.78584930432488,3.99911378165325,9.27647871996777,3.67472397644862,5.07980996396653,1.83843757322004,6.60695285996332,5.87361755191863,7.83393319606842,4.2203612073662,7.50198677539759,5.73004707612436,5.02529398202486,2.8138130501584,3.97275444219706,11.7851434189467,13.0981946335175,4.47358669980721,2.95332153999418,2.26714680320357,2.31891590961342,0.860423876981386,0,3.77792234146472,4.54843492213368,2.68816132258401,2.94933282276679,2.55645483867087,3.11743205523443,2.47337702157238,1.97180787687353,3.84979432242953,0,0,3.46385665617943,3.54703811665138,6.0662933401774,2.8545969929765,0.776813650941515,2.52351636410202,1.38788261412909,3.65358573974569,3.22861696158482,2.11011696773672,1.99900802130698,2.01066546127481,1.97755974187499,1.87979163995885,3.5384422077995,0.970601099684455,1.10420759230197,1.45462575940567,0,3.80615036115011,3.14170060220183,1.78819938646014,2.15667224110656,1.79970819298022,1.90605340609597,1.9472783122627,2.74500361691176,4.14659361972453,3.30266208365325,3.06858548796397,4.1557608911912,2.59586020908412,1.83310854930569,0.870848794270651,3.28539585963777,1.89397670297827,3.77349284591841,1.37941262660084,3.42118046630164,3.61691562805716,1.97305847538851,4.61209393025459,1.78033276663485,3.3631438196072,3.88022387279116,3.02569728268511,0.527853372491847,2.41115305670332,2.22437799380478,3.1342694986995,2.67516777330327,1.99034266818493,1.40442637462647,0.51469581422943,1.70498099637356,2.27838349789052,4.69052119962192,3.6012412292203,2.60419209143731,3.93528463494808,3.5481435964097,3.0229412817553,4.82892122519315,2.6856028744449,2.46839774870221,3.11918181750281,3.24275238183423,2.19299981137998,1.3173006917463,1.47627060636409,1.26173969138476,6.17427674275707,0.991256348951394,1.05780226665418,3.19932375802851,4.41249676534833,2.96395161040815,2.01683524623343,1.33426826306922,1.33157938278791,2.37264530772256,1.31759163779209,1.75934646160189,1.1937388322469,1.55971269695296,1.79763881730844,1.94524244887225,1.7922714592893,10.0523987505133,3.42745537829186,3.38123207019241,3.46207257337034,1.35766741017338,2.17421041659988,1.13825766823663,1.47610147979602,2.66897837330337,1.23397163921801,1.1858105083486,2.00214126859313,2.75182593158484,2.69834534861824,3.04290182082754,1.68824011826692,1.52775511068852,0.863088412352432,2.43202840162553,1.37280706594041,8.62609239164127,3.34926852901653,1.5601883655728,1.76805214562978,2.15276896226295,2.41221760681684,1.29327233116623,2.08440552947533,2.93336957595647,2.37643120085263,3.28566347603903,2.34508760418542,2.14239276797412,1.56106918286239,1.41871629695572,2.87904096543407,0.797273843287435,1.96635977658886,2.24490476425664,1.73578870297814,6.03165135757089,4.35124547054968,2.45882136509518,1.10374698521893,2.56880943980467,1.87538698547525,4.09837363441689,2.7771801992481,4.10160685241134,6.63745865304285,2.80050417052639,1.91175038362042,2.67358408898873,2.83076530788832,3.23848561339915,1.16902343164525,2.37172666767914,2.89189184779626,2.12910127812403,1.78065603667255,1.30309567482861,1.31976098378028,3.98235415019888,3.15614827001476,3.02323556964751,3.96070667487386,2.06711325016541,1.84461088766356,0.775284879504663,7.27067458955011,2.85197902707777,3.16036757935816,4.21674434299995,5.15677716240934,1.36175842301515,3.6012218806262,4.65691261617916,4.50107773566344,1.59606210278046,3.21063871683727,1.81003922662333,0.913394847343798,3.52007562095566,1.69465656691056,1.10264199027481,3.13283880588812,2.26050197374268,2.0506394475573,1.55184047204077,2.1338316966858,2.04036585640896,4.26478194624172,2.22132145037209,0.82554747185289,1.29636169158798,2.0720530270516,3.14396723758358,2.51655990527175,1.01987057996313,2.09927178485487,1.38199973804424,7.63736494412091,2.05618395827738,1.01659733563424,2.05210147561422,2.29997125615916,2.40198820120795,2.42755823492677,2.47960367176008,1.30877970992015,1.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| ||
|short_description=p@chr11:75570311..75570349,+ | |short_description=p@chr11:75570311..75570349,+ | ||
}} | }} |
Latest revision as of 23:57, 3 August 2015
Short description: | p@chr11:75570311..75570349, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:75570311..75570349, + |
Coexpression cluster: | MCL_coexpression_mm9:1991 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 6.02e-12 | 43 |
ectodermal cell | 1.44e-11 | 44 |
neurectodermal cell | 1.44e-11 | 44 |
electrically responsive cell | 5.16e-11 | 39 |
electrically active cell | 5.16e-11 | 39 |
CNS neuron (sensu Vertebrata) | 1.24e-10 | 23 |
neuroblast (sensu Vertebrata) | 1.24e-10 | 23 |
neuron | 2.94e-09 | 33 |
neuronal stem cell | 2.94e-09 | 33 |
neuroblast | 2.94e-09 | 33 |
electrically signaling cell | 2.94e-09 | 33 |
embryonic cell | 7.19e-07 | 70 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 4.23e-17 | 73 |
nervous system | 5.02e-17 | 75 |
regional part of nervous system | 1.02e-13 | 54 |
ectoderm-derived structure | 1.11e-13 | 95 |
ectoderm | 1.11e-13 | 95 |
presumptive ectoderm | 1.11e-13 | 95 |
gray matter | 1.22e-13 | 34 |
structure with developmental contribution from neural crest | 1.64e-13 | 92 |
neurectoderm | 3.63e-13 | 64 |
neural plate | 3.63e-13 | 64 |
presumptive neural plate | 3.63e-13 | 64 |
neural tube | 1.55e-12 | 52 |
neural rod | 1.55e-12 | 52 |
future spinal cord | 1.55e-12 | 52 |
neural keel | 1.55e-12 | 52 |
ecto-epithelium | 4.52e-11 | 73 |
brain grey matter | 6.30e-11 | 29 |
regional part of telencephalon | 6.30e-11 | 29 |
telencephalon | 6.30e-11 | 29 |
brain | 9.54e-10 | 47 |
future brain | 9.54e-10 | 47 |
regional part of brain | 1.09e-09 | 46 |
regional part of forebrain | 1.43e-09 | 39 |
forebrain | 1.43e-09 | 39 |
future forebrain | 1.43e-09 | 39 |
anterior neural tube | 3.16e-09 | 40 |
pre-chordal neural plate | 5.65e-09 | 49 |
cerebral cortex | 1.63e-08 | 21 |
cerebral hemisphere | 1.63e-08 | 21 |
pallium | 1.63e-08 | 21 |
tube | 2.29e-08 | 114 |
occipital lobe | 4.44e-07 | 10 |
visual cortex | 4.44e-07 | 10 |
neocortex | 4.44e-07 | 10 |
regional part of cerebral cortex | 4.85e-07 | 17 |