FFCP PHASE1:Mm9::chr7:129775816..129775821,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1073 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr7:129775816..129775821,+ | |||
|description=CAGE_peak_at_chr7:129775816..129775821,+ | |description=CAGE_peak_at_chr7:129775816..129775821,+ | ||
|id=chr7:129775816..129775821,+ | |id=chr7:129775816..129775821,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000955!6.66e-14!50;UBERON:0006238!6.66e-14!50;UBERON:0007811!1.12e-13!86;UBERON:0002616!2.82e-13!49;UBERON:0000153!7.60e-13!94;UBERON:0001049!1.05e-12!52;UBERON:0005068!1.05e-12!52;UBERON:0006241!1.05e-12!52;UBERON:0007135!1.05e-12!52;UBERON:0002021!4.38e-12!10;UBERON:0000411!4.38e-12!10;UBERON:0001950!4.38e-12!10;UBERON:0003080!4.44e-11!40;UBERON:0002791!5.36e-11!29;UBERON:0003528!5.36e-11!29;UBERON:0001893!5.36e-11!29;UBERON:0001017!1.28e-10!73;UBERON:0005743!1.28e-10!73;UBERON:0002780!1.97e-10!39;UBERON:0001890!1.97e-10!39;UBERON:0006240!1.97e-10!39;UBERON:0002020!2.03e-10!34;UBERON:0000033!2.93e-10!63;UBERON:0000073!4.95e-10!75;UBERON:0001016!4.95e-10!75;UBERON:0002346!9.36e-10!71;UBERON:0003075!9.36e-10!71;UBERON:0007284!9.36e-10!71;UBERON:0002619!4.25e-09!17;UBERON:0003056!6.15e-09!49;UBERON:0000064!6.95e-09!99;UBERON:0000956!5.29e-08!21;UBERON:0001869!5.29e-08!21;UBERON:0000203!5.29e-08!21;UBERON:0004121!8.17e-07!102;UBERON:0000924!8.17e-07!102;UBERON:0006601!8.17e-07!102 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,4.61e-39,10;UBERON:0000411,4.61e-39,10;UBERON:0001950,4.61e-39,10;UBERON:0002619,1.52e-22,17;UBERON:0000956,2.31e-22,21;UBERON:0001869,2.31e-22,21;UBERON:0000203,2.31e-22,21;UBERON:0002780,1.36e-16,39;UBERON:0001890,1.36e-16,39;UBERON:0006240,1.36e-16,39;UBERON:0002616,2.41e-16,46;UBERON:0003080,3.90e-16,40;UBERON:0000955,5.89e-16,47;UBERON:0006238,5.89e-16,47;UBERON:0003528,8.04e-16,29;UBERON:0002791,8.04e-16,29;UBERON:0001893,8.04e-16,29;UBERON:0001049,3.08e-14,52;UBERON:0005068,3.08e-14,52;UBERON:0006241,3.08e-14,52;UBERON:0007135,3.08e-14,52;UBERON:0000073,1.22e-13,54;UBERON:0002020,2.73e-13,34;UBERON:0003056,7.57e-13,49;UBERON:0002346,3.35e-11,64;UBERON:0003075,3.35e-11,64;UBERON:0007284,3.35e-11,64;UBERON:0010371,1.41e-09,73;UBERON:0001017,1.41e-09,73;UBERON:0001016,2.88e-09,75;UBERON:0010314,3.52e-07,92;UBERON:0004121,6.88e-07,95;UBERON:0000924,6.88e-07,95;UBERON:0006601,6.88e-07,95 | |||
|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0,0.333109761815663,0,0,0.315462165358238,0,0.42438965179803,0.17008658030214,0,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0.837063261473815,0,0.523523743973798,0.588231488031014,0.683045484958446,1.45653105909346,0,0,0,0,0,0,0,0,0,0.838913030288682,0,0,0,0,0,0.202316460859598,0.528990979272033,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122490799214954,0,0,0,0.255374676170375,0.46081959976873,0,0.182975287204819,0,0.279182999001381,0.56276261003168,0.61119299110724,0,0.284743361598206,0.186399445825301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304465478312141,0,0.150722640552623,0.117588707135705,0,0,0,0,0.161766849947409,0,0,0,1.46390398505774,0.628340120440365,0,0,0,0,0.449371918214468,0.915001205637253,0.753926112677186,1.56441888173049,2.04572365864264,1.0389402227978,1.62241263067758,0,0,0,0,0,0,0,0,0.136072998302656,0,0.0937017245597288,0,0,0,0,0,0.278047249225598,0,0.205782136407943,0,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420579897128254,0.102904612379284,0,0,0,0.232236671860439,0,0,0,0,0,0,0,0,0,0.898819408654221,0,0,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159454768657487,0.327726629431476,0.172684981865896,0,0,0,0,0,0.160550589987792,0.117211686592203,0,0.252470927204373,0,0,0,0,0,0,0,0.292255857911312,0,0.321321316421807,0,0.712262414669021,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0.164549020602121,0,0,0,0,0,0,0,0,0,0,0.18542530201051,0.170870880797853,0,0.185194527369712,0.188368457004691,0.410082683163076,0.915112692826091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56369293868419,0,0,0,0,0,0.117357238645754,0,0,0.241584120826006,0,0.316011120628178,0,0.102710957164827,0.129920822977795,0,0.39736270956253,0.480781798079875,1.47689527174577,0.201932899896295,0.533447646584999,1.41156659191577,0.487289403698762,0.865906574762965,1.16876902181569,0,0,0,0,0.579568782096571,0.187682475451182,0,0,0,1.12950368523413,1.38097570952153,1.14579102687879,2.57779773515531,2.05524755931193,1.5107877947794,2.02506750069542,1.80128481289688,0.453142408984205,1.03552062350364,0,0,0,0,0,0,0,0.206035057238894,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177475806159338,0,0,0.0941093804153306,0.0846146078916765,0,0,0,0.561142271657738,0,0.0985044823755635,0.409231043169689,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0,0.333109761815663,0,0,0.315462165358238,0,0.42438965179803,0.17008658030214,0,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0.837063261473815,0,0.523523743973798,0.588231488031014,0.683045484958446,1.45653105909346,0,0,0,0,0,0,0,0,0,0.838913030288682,0,0,0,0,0,0.202316460859598,0.528990979272033,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122490799214954,0,0,0,0.255374676170375,0.46081959976873,0,0.182975287204819,0,0.279182999001381,0.56276261003168,0.61119299110724,0,0.284743361598206,0.186399445825301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304465478312141,0,0.150722640552623,0.117588707135705,0,0,0,0,0.161766849947409,0,0,0,1.46390398505774,0.628340120440365,0,0,0,0,0.449371918214468,0.915001205637253,0.753926112677186,1.56441888173049,2.04572365864264,1.0389402227978,1.62241263067758,0,0,0,0,0,0,0,0,0.136072998302656,0,0.0937017245597288,0,0,0,0,0,0.278047249225598,0,0.205782136407943,0,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420579897128254,0.102904612379284,0,0,0,0.232236671860439,0,0,0,0,0,0,0,0,0,0.898819408654221,0,0,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159454768657487,0.327726629431476,0.172684981865896,0,0,0,0,0,0.160550589987792,0.117211686592203,0,0.252470927204373,0,0,0,0,0,0,0,0.292255857911312,0,0.321321316421807,0,0.712262414669021,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0.164549020602121,0,0,0,0,0,0,0,0,0,0,0.18542530201051,0.170870880797853,0,0.185194527369712,0.188368457004691,0.410082683163076,0.915112692826091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56369293868419,0,0,0,0,0,0.117357238645754,0,0,0.241584120826006,0,0.316011120628178,0,0.102710957164827,0.129920822977795,0,0.39736270956253,0.480781798079875,1.47689527174577,0.201932899896295,0.533447646584999,1.41156659191577,0.487289403698762,0.865906574762965,1.16876902181569,0,0,0,0,0.579568782096571,0.187682475451182,0,0,0,1.12950368523413,1.38097570952153,1.14579102687879,2.57779773515531,2.05524755931193,1.5107877947794,2.02506750069542,1.80128481289688,0.453142408984205,1.03552062350364,0,0,0,0,0,0,0,0.206035057238894,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177475806159338,0,0,0.0941093804153306,0.0846146078916765,0,0,0,0.561142271657738,0,0.0985044823755635,0.409231043169689,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr7:129775816..129775821,+ | |short_description=p@chr7:129775816..129775821,+ | ||
}} | }} |
Latest revision as of 04:08, 4 August 2015
Short description: | p@chr7:129775816..129775821, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:129775816..129775821, + |
Coexpression cluster: | MCL_coexpression_mm9:1073 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
occipital lobe | 4.61e-39 | 10 |
visual cortex | 4.61e-39 | 10 |
neocortex | 4.61e-39 | 10 |
regional part of cerebral cortex | 1.52e-22 | 17 |
cerebral cortex | 2.31e-22 | 21 |
cerebral hemisphere | 2.31e-22 | 21 |
pallium | 2.31e-22 | 21 |
regional part of forebrain | 1.36e-16 | 39 |
forebrain | 1.36e-16 | 39 |
future forebrain | 1.36e-16 | 39 |
regional part of brain | 2.41e-16 | 46 |
anterior neural tube | 3.90e-16 | 40 |
brain | 5.89e-16 | 47 |
future brain | 5.89e-16 | 47 |
brain grey matter | 8.04e-16 | 29 |
regional part of telencephalon | 8.04e-16 | 29 |
telencephalon | 8.04e-16 | 29 |
neural tube | 3.08e-14 | 52 |
neural rod | 3.08e-14 | 52 |
future spinal cord | 3.08e-14 | 52 |
neural keel | 3.08e-14 | 52 |
regional part of nervous system | 1.22e-13 | 54 |
gray matter | 2.73e-13 | 34 |
pre-chordal neural plate | 7.57e-13 | 49 |
neurectoderm | 3.35e-11 | 64 |
neural plate | 3.35e-11 | 64 |
presumptive neural plate | 3.35e-11 | 64 |
ecto-epithelium | 1.41e-09 | 73 |
central nervous system | 1.41e-09 | 73 |
nervous system | 2.88e-09 | 75 |
structure with developmental contribution from neural crest | 3.52e-07 | 92 |
ectoderm-derived structure | 6.88e-07 | 95 |
ectoderm | 6.88e-07 | 95 |
presumptive ectoderm | 6.88e-07 | 95 |