FFCP PHASE1:Mm9::chr14:28843571..28843579,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2 | |MCL_coexpression_id=2 | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr14:28843571..28843579,+ | |||
|description=CAGE_peak_at_chr14:28843571..28843579,+ | |description=CAGE_peak_at_chr14:28843571..28843579,+ | ||
|id=chr14:28843571..28843579,+ | |id=chr14:28843571..28843579,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!3.24e-20!71;UBERON:0003075!3.24e-20!71;UBERON:0007284!3.24e-20!71;UBERON:0000033!6.61e-20!63;UBERON:0000955!7.25e-20!50;UBERON:0006238!7.25e-20!50;UBERON:0003056!4.71e-19!49;UBERON:0002616!8.36e-19!49;UBERON:0001049!2.05e-18!52;UBERON:0005068!2.05e-18!52;UBERON:0006241!2.05e-18!52;UBERON:0007135!2.05e-18!52;UBERON:0003080!5.41e-17!40;UBERON:0002780!4.46e-16!39;UBERON:0001890!4.46e-16!39;UBERON:0006240!4.46e-16!39;UBERON:0000073!2.46e-15!75;UBERON:0001016!2.46e-15!75;UBERON:0001017!3.11e-15!73;UBERON:0005743!3.11e-15!73;UBERON:0004121!1.61e-14!102;UBERON:0000924!1.61e-14!102;UBERON:0006601!1.61e-14!102;UBERON:0002021!4.06e-14!10;UBERON:0000411!4.06e-14!10;UBERON:0001950!4.06e-14!10;UBERON:0002791!2.70e-12!29;UBERON:0003528!2.70e-12!29;UBERON:0001893!2.70e-12!29;UBERON:0002020!3.28e-12!34;UBERON:0000956!1.11e-11!21;UBERON:0001869!1.11e-11!21;UBERON:0000203!1.11e-11!21;UBERON:0002619!1.27e-11!17;UBERON:0007811!2.30e-11!86;UBERON:0000153!1.93e-09!94 | |ontology_enrichment_uberon=UBERON:0002346!3.24e-20!71;UBERON:0003075!3.24e-20!71;UBERON:0007284!3.24e-20!71;UBERON:0000033!6.61e-20!63;UBERON:0000955!7.25e-20!50;UBERON:0006238!7.25e-20!50;UBERON:0003056!4.71e-19!49;UBERON:0002616!8.36e-19!49;UBERON:0001049!2.05e-18!52;UBERON:0005068!2.05e-18!52;UBERON:0006241!2.05e-18!52;UBERON:0007135!2.05e-18!52;UBERON:0003080!5.41e-17!40;UBERON:0002780!4.46e-16!39;UBERON:0001890!4.46e-16!39;UBERON:0006240!4.46e-16!39;UBERON:0000073!2.46e-15!75;UBERON:0001016!2.46e-15!75;UBERON:0001017!3.11e-15!73;UBERON:0005743!3.11e-15!73;UBERON:0004121!1.61e-14!102;UBERON:0000924!1.61e-14!102;UBERON:0006601!1.61e-14!102;UBERON:0002021!4.06e-14!10;UBERON:0000411!4.06e-14!10;UBERON:0001950!4.06e-14!10;UBERON:0002791!2.70e-12!29;UBERON:0003528!2.70e-12!29;UBERON:0001893!2.70e-12!29;UBERON:0002020!3.28e-12!34;UBERON:0000956!1.11e-11!21;UBERON:0001869!1.11e-11!21;UBERON:0000203!1.11e-11!21;UBERON:0002619!1.27e-11!17;UBERON:0007811!2.30e-11!86;UBERON:0000153!1.93e-09!94 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,2.75e-64,10;UBERON:0000411,2.75e-64,10;UBERON:0001950,2.75e-64,10;UBERON:0002619,1.08e-37,17;UBERON:0000956,1.94e-30,21;UBERON:0001869,1.94e-30,21;UBERON:0000203,1.94e-30,21;UBERON:0003528,6.44e-22,29;UBERON:0002791,6.44e-22,29;UBERON:0001893,6.44e-22,29;UBERON:0002020,1.28e-18,34;UBERON:0000955,2.01e-16,47;UBERON:0006238,2.01e-16,47;UBERON:0002780,3.66e-16,39;UBERON:0001890,3.66e-16,39;UBERON:0006240,3.66e-16,39;UBERON:0003080,9.59e-16,40;UBERON:0002616,1.29e-13,46;UBERON:0003056,9.62e-13,49;UBERON:0001049,5.69e-12,52;UBERON:0005068,5.69e-12,52;UBERON:0006241,5.69e-12,52;UBERON:0007135,5.69e-12,52;UBERON:0000073,1.67e-11,54;UBERON:0001017,2.52e-10,73;UBERON:0001016,4.97e-10,75;UBERON:0002346,1.33e-09,64;UBERON:0003075,1.33e-09,64;UBERON:0007284,1.33e-09,64;UBERON:0001851,4.39e-09,1;UBERON:0005889,4.39e-09,1;UBERON:0010371,2.49e-08,73;UBERON:0004121,9.51e-08,95;UBERON:0000924,9.51e-08,95;UBERON:0006601,9.51e-08,95 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207379224616955,0,0,0,0,0,0.0958454710182364,0,0,0.510749352340751,0.614426133024974,0,0.182975287204819,0,0,0.56276261003168,0.61119299110724,0.294628585473668,0.569486723196412,0,0.075726193333184,0,0,0,0,0,0.649776417447669,0,0,0.170430322578058,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150722640552623,0.117588707135705,0.125666591329675,0,0,0,0,0,0,0,0.292780797011547,0.628340120440365,0,0,0,0,0.449371918214468,0,0.376963056338593,0.869121600961382,1.79000820131231,0.83115217823824,0.973447578406546,0,0.248813941220186,0,0.210441855886474,0,0,0,0,0.408218994907967,0.896796041993948,0.468508622798644,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0.16455984991348,0,0,0,0,0,0.630869845692382,0.411618449517138,0,0,0,0.232236671860439,0,0,0,0,0,0,0,0.198956472041151,0,0,0,0,0,0.228497025219458,0,0,0,0.140271639780637,0,0.147610147979602,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117211686592203,0,0,0,0,0.215423397732799,0,0.222798674082394,0,0,0,0,1.60660658210904,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0.214337035031592,0.177340233642274,0.356737635204141,0.164549020602121,0,0,0,0,0,0,0,0,0,0,0.370850604021019,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209088296014469,0,0.134864346384821,0,0,0,0,0,0.149516546043979,0,0,0,0.168956125490778,0.117357238645754,0,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.21227026878773,2.76195141904306,4.01026859407578,4.64003592327956,1.37016503954128,0.755393897389701,4.05013500139084,3.60256962579376,2.26571204492102,2.5888015587591,0,0,0,0.243106717068294,0,0,0.222246727801615,0,0,0.252697211763798,0.25347929989024,0,0.0936415074698824,0.128050304809739,0,0,0,0.192909220463705,0,0.147198920134397,0,0.354951612318675,0,0.145346416632329,0,0.0846146078916765,0.182927972872773,0.263069711437843,0.271608227691724,0,0,0.197008964751127,0,0.464810523557898,0.385813221962283,0,0.233931608445408,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207379224616955,0,0,0,0,0,0.0958454710182364,0,0,0.510749352340751,0.614426133024974,0,0.182975287204819,0,0,0.56276261003168,0.61119299110724,0.294628585473668,0.569486723196412,0,0.075726193333184,0,0,0,0,0,0.649776417447669,0,0,0.170430322578058,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150722640552623,0.117588707135705,0.125666591329675,0,0,0,0,0,0,0,0.292780797011547,0.628340120440365,0,0,0,0,0.449371918214468,0,0.376963056338593,0.869121600961382,1.79000820131231,0.83115217823824,0.973447578406546,0,0.248813941220186,0,0.210441855886474,0,0,0,0,0.408218994907967,0.896796041993948,0.468508622798644,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0.16455984991348,0,0,0,0,0,0.630869845692382,0.411618449517138,0,0,0,0.232236671860439,0,0,0,0,0,0,0,0.198956472041151,0,0,0,0,0,0.228497025219458,0,0,0,0.140271639780637,0,0.147610147979602,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117211686592203,0,0,0,0,0.215423397732799,0,0.222798674082394,0,0,0,0,1.60660658210904,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0.214337035031592,0.177340233642274,0.356737635204141,0.164549020602121,0,0,0,0,0,0,0,0,0,0,0.370850604021019,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209088296014469,0,0.134864346384821,0,0,0,0,0,0.149516546043979,0,0,0,0.168956125490778,0.117357238645754,0,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.21227026878773,2.76195141904306,4.01026859407578,4.64003592327956,1.37016503954128,0.755393897389701,4.05013500139084,3.60256962579376,2.26571204492102,2.5888015587591,0,0,0,0.243106717068294,0,0,0.222246727801615,0,0,0.252697211763798,0.25347929989024,0,0.0936415074698824,0.128050304809739,0,0,0,0.192909220463705,0,0.147198920134397,0,0.354951612318675,0,0.145346416632329,0,0.0846146078916765,0.182927972872773,0.263069711437843,0.271608227691724,0,0,0.197008964751127,0,0.464810523557898,0.385813221962283,0,0.233931608445408,0,0,0,0 | ||
|short_description=p@chr14:28843571..28843579,+ | |short_description=p@chr14:28843571..28843579,+ | ||
}} | }} |
Latest revision as of 04:51, 4 August 2015
Short description: | p@chr14:28843571..28843579, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr14:28843571..28843579, + |
Coexpression cluster: | MCL_coexpression_mm9:2 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
occipital lobe | 2.75e-64 | 10 |
visual cortex | 2.75e-64 | 10 |
neocortex | 2.75e-64 | 10 |
regional part of cerebral cortex | 1.08e-37 | 17 |
cerebral cortex | 1.94e-30 | 21 |
cerebral hemisphere | 1.94e-30 | 21 |
pallium | 1.94e-30 | 21 |
brain grey matter | 6.44e-22 | 29 |
regional part of telencephalon | 6.44e-22 | 29 |
telencephalon | 6.44e-22 | 29 |
gray matter | 1.28e-18 | 34 |
brain | 2.01e-16 | 47 |
future brain | 2.01e-16 | 47 |
regional part of forebrain | 3.66e-16 | 39 |
forebrain | 3.66e-16 | 39 |
future forebrain | 3.66e-16 | 39 |
anterior neural tube | 9.59e-16 | 40 |
regional part of brain | 1.29e-13 | 46 |
pre-chordal neural plate | 9.62e-13 | 49 |
neural tube | 5.69e-12 | 52 |
neural rod | 5.69e-12 | 52 |
future spinal cord | 5.69e-12 | 52 |
neural keel | 5.69e-12 | 52 |
regional part of nervous system | 1.67e-11 | 54 |
central nervous system | 2.52e-10 | 73 |
nervous system | 4.97e-10 | 75 |
neurectoderm | 1.33e-09 | 64 |
neural plate | 1.33e-09 | 64 |
presumptive neural plate | 1.33e-09 | 64 |
cortex | 4.39e-09 | 1 |
zygote cortex | 4.39e-09 | 1 |
ecto-epithelium | 2.49e-08 | 73 |
ectoderm-derived structure | 9.51e-08 | 95 |
ectoderm | 9.51e-08 | 95 |
presumptive ectoderm | 9.51e-08 | 95 |