FFCP PHASE1:Mm9::chr3:89126782..89126794,-: Difference between revisions
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{{FFCP|EntrezGene=13638|HGNC=|MCL_coexpression_id=1|UniProt=O08545|association_with_transcript=6bp_to_NM_010108,uc008pyq.1_5end|description=CAGE_peak_2_at_Efna3_5end|id=chr3:89126782..89126794,-|ontology_enrichment_celltype=CL:0000117!7.18e-16!23;CL:0000337!7.18e-16!23;CL:0000540!2.08e-11!33;CL:0000047!2.08e-11!33;CL:0000031!2.08e-11!33;CL:0000404!2.08e-11!33;CL:0000221!2.43e-09!44;CL:0000133!2.43e-09!44;CL:0000393!4.15e-09!39;CL:0000211!4.15e-09!39;CL:0002319!5.89e-09!43;CL:0000055!4.67e-07!50|ontology_enrichment_celltype_v019_2=CL:0000117,9.83e-31,23;CL:0000337,9.83e-31,23;CL:0000540,6.16e-20,33;CL:0000047,6.16e-20,33;CL:0000031,6.16e-20,33;CL:0000404,6.16e-20,33;CL:0000393,3.97e-16,39;CL:0000211,3.97e-16,39;CL:0002319,3.49e-14,43;CL:0000221,9.39e-14,44;CL:0000133,9.39e-14,44;CL:0002609,1.52e-09,6;CL:0002612,3.12e-08,3;CL:0002321,8.16e-08,70;CL:0002614,7.35e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002020!1.78e-16!34;UBERON:0004121!2.32e-14!102;UBERON:0000924!2.32e-14!102;UBERON:0006601!2.32e-14!102;UBERON:0001017!6.76e-13!73;UBERON:0005743!6.76e-13!73;UBERON:0001049!2.42e-12!52;UBERON:0005068!2.42e-12!52;UBERON:0006241!2.42e-12!52;UBERON:0007135!2.42e-12!52;UBERON:0002791!2.73e-12!29;UBERON:0003528!2.73e-12!29;UBERON:0001893!2.73e-12!29;UBERON:0000073!4.57e-12!75;UBERON:0001016!4.57e-12!75;UBERON:0002346!1.80e-11!71;UBERON:0003075!1.80e-11!71;UBERON:0007284!1.80e-11!71;UBERON:0000033!8.41e-11!63;UBERON:0002616!2.82e-10!49;UBERON:0002780!7.41e-10!39;UBERON:0001890!7.41e-10!39;UBERON:0006240!7.41e-10!39;UBERON:0000955!8.14e-10!50;UBERON:0006238!8.14e-10!50;UBERON:0003056!2.41e-09!49;UBERON:0003080!2.44e-09!40;UBERON:0000956!7.67e-08!21;UBERON:0001869!7.67e-08!21;UBERON:0000203!7.67e-08!21|ontology_enrichment_uberon_v019_2=UBERON:0002020,7.56e-22,34;UBERON:0000073,3.47e-16,54;UBERON:0004121,1.92e-15,95;UBERON:0000924,1.92e-15,95;UBERON:0006601,1.92e-15,95;UBERON:0010371,1.95e-13,73;UBERON:0003528,2.41e-13,29;UBERON:0002791,2.41e-13,29;UBERON:0001893,2.41e-13,29;UBERON:0001017,7.60e-13,73;UBERON:0001948,9.50e-13,5;UBERON:0002315,9.50e-13,5;UBERON:0001049,1.58e-12,52;UBERON:0005068,1.58e-12,52;UBERON:0006241,1.58e-12,52;UBERON:0007135,1.58e-12,52;UBERON:0001016,2.43e-12,75;UBERON:0000014,1.68e-11,5;UBERON:0001003,1.68e-11,5;UBERON:0002097,1.68e-11,5;UBERON:0002199,1.68e-11,5;UBERON:0007029,1.68e-11,5;UBERON:0007376,1.68e-11,5;UBERON:0002416,1.68e-11,5;UBERON:0007383,1.68e-11,5;UBERON:0002240,1.57e-10,6;UBERON:0005174,1.57e-10,6;UBERON:0001137,1.57e-10,6;UBERON:0002346,2.91e-09,64;UBERON:0003075,2.91e-09,64;UBERON:0007284,2.91e-09,64;UBERON:0002780,5.02e-09,39;UBERON:0001890,5.02e-09,39;UBERON:0006240,5.02e-09,39;UBERON:0003080,1.03e-08,40;UBERON:0000956,1.59e-08,21;UBERON:0001869,1.59e-08,21;UBERON:0000203,1.59e-08,21;UBERON:0003102,2.80e-08,22;UBERON:0002257,3.12e-08,3;UBERON:0002616,3.84e-07,46;UBERON:0000955,6.39e-07,47;UBERON:0006238,6.39e-07,47;UBERON:0002038,7.35e-07,3;UBERON:0009663,7.35e-07,3;UBERON:0009661,7.35e-07,3;UBERON:0000125,7.35e-07,3;UBERON:0002308,7.35e-07,3|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0.577703239502549,0,1.02084678131185,0,0,0,0,0,0,0.125896817975577,0.101376931219515,0,0,0.218025156380447,0,0.388859798148567,0.279972843250725,0,0,0,0,0,0,0,2.02316460859598,1.05798195854407,0.633831403506179,1.0165335962074,0,0,0,0,0.299600110518405,0,3.21437798156281,3.24014251996058,3.57552434297349,10.5690864229407,3.97563373712904,1.95985278743926,1.62937300731002,0,1.10115880999389,1.40456071893706,1.53606533256243,0.659431438650969,1.55528994124096,0.52091337055676,1.67509799400829,1.68828783009504,1.98637722109853,3.53554302568401,4.9830088279686,3.54158947068071,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0.563373679106722,0,0,0,0,0,0.505524445014783,0,0,0,1.04091196059682,0,0.230615497256059,0.150722640552623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.457500602818626,2.01046963380583,0.521472960576829,1.02286182932132,0.20778804455956,0.162241263067758,0.305518091550949,0,0,0,0,0.459804208866946,0.540186389416048,0.30140963567143,0.204109497453984,0,0.187403449119458,0.258703370739016,0.431135985865684,0.378212160335639,0.879755620819744,0.657587197282725,1.11218899690239,2.089512999133,2.05782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134206418760372,1.26173969138476,1.23485534855141,0,0,0.426576501070468,0.232236671860439,0,0,0,0.380451252225118,0,0,0,0,0,0,0,0,0.379335801906163,0.571242563048644,0,0.203651327845314,0,0.0701358198903186,0.189709611372772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0,0.195133647857799,0,0.221464689648775,0.159454768657487,0,0,0,0,0,0,0,0.481651769963376,0.35163505977661,0.163934945376675,0,0.315508219416257,0,0.215423397732799,0,0,0,0.404810701674894,0,0,0,0,2.67098405500883,0.488660878060728,0.164970122972535,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354680467284547,0.356737635204141,0.164549020602121,0,0.23467170806371,0,0,2.4732937941222,1.93757312035087,2.41251699712623,2.626191568069,3.11867709515616,0,0.370850604021019,0,0,0,0,0,0,0,0,0.552799895217695,0.954670618015114,0.316335993581135,0.203319467126849,0.108005340821801,0.209088296014469,0,0.539457385539283,0.661227645802687,0,0.129614973291793,0,0,0.149516546043979,0,0.194451188344048,0.258319646955462,0.337912250981556,0,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.72076460338254,0.887943813496259,2.33256027184637,1.34307693091263,0,0,0,2.14368379079066,0,2.25900737046827,0.460325236507177,0.572895513439397,2.40594455281163,0.685082519770642,0,0,0.900642406448441,0.453142408984205,1.55328093525546,0.31136204275253,0.399024873401031,0.512200817262403,0.972426868273176,0,0.551530525350042,0,0,0,0.252697211763798,0.25347929989024,0.377252682772152,0.561849044819294,0.640251524048693,0.631790158511746,0,0.811190281613988,0.578727661391115,0.412085900803307,0.147198920134397,0,0.887379030796687,0.476872379894642,0.145346416632329,0,0.169229215783353,0.182927972872773,0,0.135804113845862,0,0.237270036248348,0.689531376628944,0,0.154936841185966,0.578719832943424,0.749431733813838,0.467863216890817,1.28922632428979,0.765153328275374,0.661774257358546,0|short_description=p2@Efna3}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:13638 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:O08545 | |||
|association_with_transcript=6bp_to_NM_010108,uc008pyq.1_5end | |||
|cluster_id=chr3:89126782..89126794,- | |||
|description=CAGE_peak_2_at_Efna3_5end | |||
|id=chr3:89126782..89126794,- | |||
|ontology_enrichment_celltype=CL:0000117!7.18e-16!23;CL:0000337!7.18e-16!23;CL:0000540!2.08e-11!33;CL:0000047!2.08e-11!33;CL:0000031!2.08e-11!33;CL:0000404!2.08e-11!33;CL:0000221!2.43e-09!44;CL:0000133!2.43e-09!44;CL:0000393!4.15e-09!39;CL:0000211!4.15e-09!39;CL:0002319!5.89e-09!43;CL:0000055!4.67e-07!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,9.83e-31,23;CL:0000337,9.83e-31,23;CL:0000540,6.16e-20,33;CL:0000047,6.16e-20,33;CL:0000031,6.16e-20,33;CL:0000404,6.16e-20,33;CL:0000393,3.97e-16,39;CL:0000211,3.97e-16,39;CL:0002319,3.49e-14,43;CL:0000221,9.39e-14,44;CL:0000133,9.39e-14,44;CL:0002609,1.52e-09,6;CL:0002612,3.12e-08,3;CL:0002321,8.16e-08,70;CL:0002614,7.35e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!1.78e-16!34;UBERON:0004121!2.32e-14!102;UBERON:0000924!2.32e-14!102;UBERON:0006601!2.32e-14!102;UBERON:0001017!6.76e-13!73;UBERON:0005743!6.76e-13!73;UBERON:0001049!2.42e-12!52;UBERON:0005068!2.42e-12!52;UBERON:0006241!2.42e-12!52;UBERON:0007135!2.42e-12!52;UBERON:0002791!2.73e-12!29;UBERON:0003528!2.73e-12!29;UBERON:0001893!2.73e-12!29;UBERON:0000073!4.57e-12!75;UBERON:0001016!4.57e-12!75;UBERON:0002346!1.80e-11!71;UBERON:0003075!1.80e-11!71;UBERON:0007284!1.80e-11!71;UBERON:0000033!8.41e-11!63;UBERON:0002616!2.82e-10!49;UBERON:0002780!7.41e-10!39;UBERON:0001890!7.41e-10!39;UBERON:0006240!7.41e-10!39;UBERON:0000955!8.14e-10!50;UBERON:0006238!8.14e-10!50;UBERON:0003056!2.41e-09!49;UBERON:0003080!2.44e-09!40;UBERON:0000956!7.67e-08!21;UBERON:0001869!7.67e-08!21;UBERON:0000203!7.67e-08!21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,7.56e-22,34;UBERON:0000073,3.47e-16,54;UBERON:0004121,1.92e-15,95;UBERON:0000924,1.92e-15,95;UBERON:0006601,1.92e-15,95;UBERON:0010371,1.95e-13,73;UBERON:0003528,2.41e-13,29;UBERON:0002791,2.41e-13,29;UBERON:0001893,2.41e-13,29;UBERON:0001017,7.60e-13,73;UBERON:0001948,9.50e-13,5;UBERON:0002315,9.50e-13,5;UBERON:0001049,1.58e-12,52;UBERON:0005068,1.58e-12,52;UBERON:0006241,1.58e-12,52;UBERON:0007135,1.58e-12,52;UBERON:0001016,2.43e-12,75;UBERON:0000014,1.68e-11,5;UBERON:0001003,1.68e-11,5;UBERON:0002097,1.68e-11,5;UBERON:0002199,1.68e-11,5;UBERON:0007029,1.68e-11,5;UBERON:0007376,1.68e-11,5;UBERON:0002416,1.68e-11,5;UBERON:0007383,1.68e-11,5;UBERON:0002240,1.57e-10,6;UBERON:0005174,1.57e-10,6;UBERON:0001137,1.57e-10,6;UBERON:0002346,2.91e-09,64;UBERON:0003075,2.91e-09,64;UBERON:0007284,2.91e-09,64;UBERON:0002780,5.02e-09,39;UBERON:0001890,5.02e-09,39;UBERON:0006240,5.02e-09,39;UBERON:0003080,1.03e-08,40;UBERON:0000956,1.59e-08,21;UBERON:0001869,1.59e-08,21;UBERON:0000203,1.59e-08,21;UBERON:0003102,2.80e-08,22;UBERON:0002257,3.12e-08,3;UBERON:0002616,3.84e-07,46;UBERON:0000955,6.39e-07,47;UBERON:0006238,6.39e-07,47;UBERON:0002038,7.35e-07,3;UBERON:0009663,7.35e-07,3;UBERON:0009661,7.35e-07,3;UBERON:0000125,7.35e-07,3;UBERON:0002308,7.35e-07,3 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0.577703239502549,0,1.02084678131185,0,0,0,0,0,0,0.125896817975577,0.101376931219515,0,0,0.218025156380447,0,0.388859798148567,0.279972843250725,0,0,0,0,0,0,0,2.02316460859598,1.05798195854407,0.633831403506179,1.0165335962074,0,0,0,0,0.299600110518405,0,3.21437798156281,3.24014251996058,3.57552434297349,10.5690864229407,3.97563373712904,1.95985278743926,1.62937300731002,0,1.10115880999389,1.40456071893706,1.53606533256243,0.659431438650969,1.55528994124096,0.52091337055676,1.67509799400829,1.68828783009504,1.98637722109853,3.53554302568401,4.9830088279686,3.54158947068071,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0.563373679106722,0,0,0,0,0,0.505524445014783,0,0,0,1.04091196059682,0,0.230615497256059,0.150722640552623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.457500602818626,2.01046963380583,0.521472960576829,1.02286182932132,0.20778804455956,0.162241263067758,0.305518091550949,0,0,0,0,0.459804208866946,0.540186389416048,0.30140963567143,0.204109497453984,0,0.187403449119458,0.258703370739016,0.431135985865684,0.378212160335639,0.879755620819744,0.657587197282725,1.11218899690239,2.089512999133,2.05782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134206418760372,1.26173969138476,1.23485534855141,0,0,0.426576501070468,0.232236671860439,0,0,0,0.380451252225118,0,0,0,0,0,0,0,0,0.379335801906163,0.571242563048644,0,0.203651327845314,0,0.0701358198903186,0.189709611372772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0,0.195133647857799,0,0.221464689648775,0.159454768657487,0,0,0,0,0,0,0,0.481651769963376,0.35163505977661,0.163934945376675,0,0.315508219416257,0,0.215423397732799,0,0,0,0.404810701674894,0,0,0,0,2.67098405500883,0.488660878060728,0.164970122972535,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354680467284547,0.356737635204141,0.164549020602121,0,0.23467170806371,0,0,2.4732937941222,1.93757312035087,2.41251699712623,2.626191568069,3.11867709515616,0,0.370850604021019,0,0,0,0,0,0,0,0,0.552799895217695,0.954670618015114,0.316335993581135,0.203319467126849,0.108005340821801,0.209088296014469,0,0.539457385539283,0.661227645802687,0,0.129614973291793,0,0,0.149516546043979,0,0.194451188344048,0.258319646955462,0.337912250981556,0,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.72076460338254,0.887943813496259,2.33256027184637,1.34307693091263,0,0,0,2.14368379079066,0,2.25900737046827,0.460325236507177,0.572895513439397,2.40594455281163,0.685082519770642,0,0,0.900642406448441,0.453142408984205,1.55328093525546,0.31136204275253,0.399024873401031,0.512200817262403,0.972426868273176,0,0.551530525350042,0,0,0,0.252697211763798,0.25347929989024,0.377252682772152,0.561849044819294,0.640251524048693,0.631790158511746,0,0.811190281613988,0.578727661391115,0.412085900803307,0.147198920134397,0,0.887379030796687,0.476872379894642,0.145346416632329,0,0.169229215783353,0.182927972872773,0,0.135804113845862,0,0.237270036248348,0.689531376628944,0,0.154936841185966,0.578719832943424,0.749431733813838,0.467863216890817,1.28922632428979,0.765153328275374,0.661774257358546,0 | |||
|short_description=p2@Efna3 | |||
}} |
Revision as of 04:52, 4 August 2015
Short description: | p2@Efna3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Efna3_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 6bp_to_NM_010108, uc008pyq.1_5end |
EntrezGene: | 13638 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 9.83e-31 | 23 |
neuroblast (sensu Vertebrata) | 9.83e-31 | 23 |
neuron | 6.16e-20 | 33 |
neuronal stem cell | 6.16e-20 | 33 |
neuroblast | 6.16e-20 | 33 |
electrically signaling cell | 6.16e-20 | 33 |
electrically responsive cell | 3.97e-16 | 39 |
electrically active cell | 3.97e-16 | 39 |
neural cell | 3.49e-14 | 43 |
ectodermal cell | 9.39e-14 | 44 |
neurectodermal cell | 9.39e-14 | 44 |
neuron of cerebral cortex | 1.52e-09 | 6 |
neuron of the ventral spinal cord | 3.12e-08 | 3 |
embryonic cell | 8.16e-08 | 70 |
neuron of the substantia nigra | 7.35e-07 | 3 |