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FFCP PHASE1:Mm9::chr11:88921842..88921902,-: Difference between revisions

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{{FFCP|EntrezGene=56077|HGNC=|UniProt=Q9R1C6,F2Z490|association_with_transcript=159bp_to_ENSMUST00000000285,ENSMUST00000152772,NM_019505_5end|description=CAGE_peak_2_at_Dgke_5end|id=chr11:88921842..88921902,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007811!3.78e-13!86;UBERON:0000153!6.96e-12!94;UBERON:0001049!4.24e-11!52;UBERON:0005068!4.24e-11!52;UBERON:0006241!4.24e-11!52;UBERON:0007135!4.24e-11!52;UBERON:0002346!1.00e-10!71;UBERON:0003075!1.00e-10!71;UBERON:0007284!1.00e-10!71;UBERON:0000033!2.40e-10!63;UBERON:0000955!3.42e-10!50;UBERON:0006238!3.42e-10!50;UBERON:0002616!6.87e-10!49;UBERON:0001017!6.90e-10!73;UBERON:0005743!6.90e-10!73;UBERON:0003056!2.35e-09!49;UBERON:0000073!3.14e-09!75;UBERON:0001016!3.14e-09!75;UBERON:0003080!4.66e-09!40;UBERON:0002780!8.62e-09!39;UBERON:0001890!8.62e-09!39;UBERON:0006240!8.62e-09!39;UBERON:0002020!9.81e-09!34;UBERON:0000477!8.17e-08!154;UBERON:0000025!1.17e-07!114;UBERON:0004121!1.45e-07!102;UBERON:0000924!1.45e-07!102;UBERON:0006601!1.45e-07!102;UBERON:0002791!2.33e-07!29;UBERON:0003528!2.33e-07!29;UBERON:0001893!2.33e-07!29;UBERON:0004111!4.64e-07!122|ontology_enrichment_uberon_v019_2=UBERON:0010314,6.07e-15,92;UBERON:0002346,5.78e-12,64;UBERON:0003075,5.78e-12,64;UBERON:0007284,5.78e-12,64;UBERON:0000073,1.71e-11,54;UBERON:0001049,2.92e-11,52;UBERON:0005068,2.92e-11,52;UBERON:0006241,2.92e-11,52;UBERON:0007135,2.92e-11,52;UBERON:0010371,1.02e-10,73;UBERON:0001017,7.42e-10,73;UBERON:0000955,1.39e-09,47;UBERON:0006238,1.39e-09,47;UBERON:0003056,2.14e-09,49;UBERON:0002616,2.76e-09,46;UBERON:0001016,3.37e-09,75;UBERON:0003080,4.26e-09,40;UBERON:0002780,7.90e-09,39;UBERON:0001890,7.90e-09,39;UBERON:0006240,7.90e-09,39;UBERON:0002020,9.00e-09,34;UBERON:0004121,4.31e-08,95;UBERON:0000924,4.31e-08,95;UBERON:0006601,4.31e-08,95;UBERON:0000025,9.74e-08,114;UBERON:0003528,2.17e-07,29;UBERON:0002791,2.17e-07,29;UBERON:0001893,2.17e-07,29;UBERON:0004111,3.50e-07,122|phase1_expression=5.92550734287738,0,0,0,0.500895729946347,1.6787927191189,1.63528848416868,1.54947988129892,3.94208422024667,4.91535505276186,0.68487187290202,0.558405112967355,2.05440875917447,1.13646523144697,0.333109761815663,1.01237633694913,0.699561878128147,1.89277299214943,2.19383093769182,1.69755860719212,3.48677489619386,4.17021995043718,3.39559725880616,0.799962113967033,1.60586496747019,0.57423196411502,0,0.215471232685889,0.570070258369122,0.756090389279792,0.665191531965914,6.98533740805594,6.76571266343027,15.8481681015439,0.866554859253824,0.664938581433969,0.408338712524738,0.418531630736908,0,0.523523743973798,0,0,0,5.03587271902309,2.53442328048786,2.38610777810186,0,0.218025156380447,1.5378032791413,2.13872888981712,0.839918529752175,0,1.34226084846189,0.725362142011344,3.36093799142464,2.82985379639542,2.57880095944881,1.03134418455488,6.06949382578793,4.7609188134483,3.80298842103708,2.37191172448392,0.889294796111139,0.449949858640699,0,0,0.898800331555214,1.92109152660777,3.7328260431052,4.86021377994086,2.73422449756797,3.99911378165325,5.30084498283872,2.9397791811589,2.20444583341944,3.67687514644008,4.40463523997555,7.53355294702608,5.06901559745603,7.12185953743047,6.03818447775904,2.6045668527838,4.4669279840221,7.87867654044352,4.43114918552749,7.95497180778903,6.26435395516053,6.71038004971082,2.04460721999597,1.43585964202892,2.02905142091174,1.72084775396277,1.3599426674155,0,1.29955283489534,1.79210754838934,0.842666520790511,0,1.29893002301434,0,5.0703631119605,1.28326477414318,0,7.11066703153331,2.59789249213457,3.54703811665138,2.52762222507392,1.94112595522402,1.55362730188303,4.60170631100957,3.29622120855658,1.82679286987285,0.922461989024234,1.80867168663147,9.40709657085639,1.75933227861546,1.48316980640624,4.04878199375753,0.884610551949874,2.42650274921114,1.10420759230197,1.45462575940567,1.86391761218122,6.44117753425404,10.8912287542997,0.510914110417183,4.55297473122497,4.79922184794726,4.95573885584952,5.84183493678809,7.77751024791665,7.03664371832041,7.12679712788333,14.3200656104985,7.06479351502504,11.5191296778108,6.00852246716866,2.86136032403214,5.55990068554084,5.89237196482127,2.08192708740326,1.60931473103431,1.0803727788321,2.56198190320716,8.98081788797528,6.53379973452734,5.90320864726292,16.298312356558,3.44908788692548,1.32374256117473,2.81521798662318,2.84954452155847,2.22437799380478,3.83077383174383,2.26360350048738,2.9855140022774,1.40442637462647,2.57347907114715,2.27330799516474,4.76389276831654,3.51789089971644,3.6012412292203,5.44512891845984,5.1158700254325,4.62801338662135,6.0458825635106,5.09719462659276,9.92505410120941,6.41783414662574,4.10418660197738,6.72871119230603,6.57899943413995,9.00155472693308,15.0311189011616,6.9395683026162,10.7020796874456,0,0,2.55945900642281,2.09013004674395,3.09281907173024,2.21851877085677,2.00140239460383,0.760902504450237,0.949058123089023,2.79988223030818,0.754005626400808,2.387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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:56077
|HGNC=
|TSSclassifier=NA
|UniProt=uniprot:Q9R1C6,uniprot:F2Z490
|association_with_transcript=159bp_to_ENSMUST00000000285,ENSMUST00000152772,NM_019505_5end
|cluster_id=chr11:88921842..88921902,-
|description=CAGE_peak_2_at_Dgke_5end
|id=chr11:88921842..88921902,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0007811!3.78e-13!86;UBERON:0000153!6.96e-12!94;UBERON:0001049!4.24e-11!52;UBERON:0005068!4.24e-11!52;UBERON:0006241!4.24e-11!52;UBERON:0007135!4.24e-11!52;UBERON:0002346!1.00e-10!71;UBERON:0003075!1.00e-10!71;UBERON:0007284!1.00e-10!71;UBERON:0000033!2.40e-10!63;UBERON:0000955!3.42e-10!50;UBERON:0006238!3.42e-10!50;UBERON:0002616!6.87e-10!49;UBERON:0001017!6.90e-10!73;UBERON:0005743!6.90e-10!73;UBERON:0003056!2.35e-09!49;UBERON:0000073!3.14e-09!75;UBERON:0001016!3.14e-09!75;UBERON:0003080!4.66e-09!40;UBERON:0002780!8.62e-09!39;UBERON:0001890!8.62e-09!39;UBERON:0006240!8.62e-09!39;UBERON:0002020!9.81e-09!34;UBERON:0000477!8.17e-08!154;UBERON:0000025!1.17e-07!114;UBERON:0004121!1.45e-07!102;UBERON:0000924!1.45e-07!102;UBERON:0006601!1.45e-07!102;UBERON:0002791!2.33e-07!29;UBERON:0003528!2.33e-07!29;UBERON:0001893!2.33e-07!29;UBERON:0004111!4.64e-07!122
|ontology_enrichment_uberon_v019_2=UBERON:0010314,6.07e-15,92;UBERON:0002346,5.78e-12,64;UBERON:0003075,5.78e-12,64;UBERON:0007284,5.78e-12,64;UBERON:0000073,1.71e-11,54;UBERON:0001049,2.92e-11,52;UBERON:0005068,2.92e-11,52;UBERON:0006241,2.92e-11,52;UBERON:0007135,2.92e-11,52;UBERON:0010371,1.02e-10,73;UBERON:0001017,7.42e-10,73;UBERON:0000955,1.39e-09,47;UBERON:0006238,1.39e-09,47;UBERON:0003056,2.14e-09,49;UBERON:0002616,2.76e-09,46;UBERON:0001016,3.37e-09,75;UBERON:0003080,4.26e-09,40;UBERON:0002780,7.90e-09,39;UBERON:0001890,7.90e-09,39;UBERON:0006240,7.90e-09,39;UBERON:0002020,9.00e-09,34;UBERON:0004121,4.31e-08,95;UBERON:0000924,4.31e-08,95;UBERON:0006601,4.31e-08,95;UBERON:0000025,9.74e-08,114;UBERON:0003528,2.17e-07,29;UBERON:0002791,2.17e-07,29;UBERON:0001893,2.17e-07,29;UBERON:0004111,3.50e-07,122
|phase1_expression=5.92550734287738,0,0,0,0.500895729946347,1.6787927191189,1.63528848416868,1.54947988129892,3.94208422024667,4.91535505276186,0.68487187290202,0.558405112967355,2.05440875917447,1.13646523144697,0.333109761815663,1.01237633694913,0.699561878128147,1.89277299214943,2.19383093769182,1.69755860719212,3.48677489619386,4.17021995043718,3.39559725880616,0.799962113967033,1.60586496747019,0.57423196411502,0,0.215471232685889,0.570070258369122,0.756090389279792,0.665191531965914,6.98533740805594,6.76571266343027,15.8481681015439,0.866554859253824,0.664938581433969,0.408338712524738,0.418531630736908,0,0.523523743973798,0,0,0,5.03587271902309,2.53442328048786,2.38610777810186,0,0.218025156380447,1.5378032791413,2.13872888981712,0.839918529752175,0,1.34226084846189,0.725362142011344,3.36093799142464,2.82985379639542,2.57880095944881,1.03134418455488,6.06949382578793,4.7609188134483,3.80298842103708,2.37191172448392,0.889294796111139,0.449949858640699,0,0,0.898800331555214,1.92109152660777,3.7328260431052,4.86021377994086,2.73422449756797,3.99911378165325,5.30084498283872,2.9397791811589,2.20444583341944,3.67687514644008,4.40463523997555,7.53355294702608,5.06901559745603,7.12185953743047,6.03818447775904,2.6045668527838,4.4669279840221,7.87867654044352,4.43114918552749,7.95497180778903,6.26435395516053,6.71038004971082,2.04460721999597,1.43585964202892,2.02905142091174,1.72084775396277,1.3599426674155,0,1.29955283489534,1.79210754838934,0.842666520790511,0,1.29893002301434,0,5.0703631119605,1.28326477414318,0,7.11066703153331,2.59789249213457,3.54703811665138,2.52762222507392,1.94112595522402,1.55362730188303,4.60170631100957,3.29622120855658,1.82679286987285,0.922461989024234,1.80867168663147,9.40709657085639,1.75933227861546,1.48316980640624,4.04878199375753,0.884610551949874,2.42650274921114,1.10420759230197,1.45462575940567,1.86391761218122,6.44117753425404,10.8912287542997,0.510914110417183,4.55297473122497,4.79922184794726,4.95573885584952,5.84183493678809,7.77751024791665,7.03664371832041,7.12679712788333,14.3200656104985,7.06479351502504,11.5191296778108,6.00852246716866,2.86136032403214,5.55990068554084,5.89237196482127,2.08192708740326,1.60931473103431,1.0803727788321,2.56198190320716,8.98081788797528,6.53379973452734,5.90320864726292,16.298312356558,3.44908788692548,1.32374256117473,2.81521798662318,2.84954452155847,2.22437799380478,3.83077383174383,2.26360350048738,2.9855140022774,1.40442637462647,2.57347907114715,2.27330799516474,4.76389276831654,3.51789089971644,3.6012412292203,5.44512891845984,5.1158700254325,4.62801338662135,6.0458825635106,5.09719462659276,9.92505410120941,6.41783414662574,4.10418660197738,6.72871119230603,6.57899943413995,9.00155472693308,15.0311189011616,6.9395683026162,10.7020796874456,0,0,2.55945900642281,2.09013004674395,3.09281907173024,2.21851877085677,2.00140239460383,0.760902504450237,0.949058123089023,2.79988223030818,0.754005626400808,2.38747766449381,1.16978452271472,0.898819408654221,2.37751854862164,1.7922714592893,1.89667900953082,3.31320686568214,6.76246414038483,4.07302655690629,1.93952487167626,6.73303870947058,2.46622494784603,1.91893192373483,1.41298855057237,3.20832626196681,0,1.00107063429656,1.37591296579242,0.674586337154561,0.405720242777006,0.482354319504834,0,0,2.10775794807546,0.823684239564244,1.43768206527355,2.23284568601102,0.936113019343682,0.757736633841335,0.717589654087649,1.4473305640901,5.17308932466493,2.84237117655727,3.58522948172457,3.73439188705414,5.63256595892405,4.52266895092903,2.61848004974615,5.65887578787617,6.14777062014145,9.08005227559977,3.34855014180723,5.07976275618788,3.45369963731791,8.10034728056465,3.01582567878545,2.17562273527484,1.96705709207614,1.65562047782839,6.42202359951168,10.1974167335217,0.983609672260053,6.5642441073137,4.10160685241134,2.34263246577983,7.97066571611356,1.43381278771531,3.34198011123591,2.26461224631066,0.809621403349789,2.92255857911312,4.74345333535828,6.10510501201433,3.40656204499845,3.73937767701236,14.3340524231147,3.13443233647817,0,1.94224508923985,2.11626489875326,1.50884063804718,1.47650946440386,0.614870295887855,3.6179961043551,5.45300594216258,2.49548164869305,1.58018378967908,2.10837217149998,0,9.87274856685985,1.8006109403131,2.8458910432206,2.35770738534752,4.07882537377229,5.35106452806212,5.43011767986999,7.00269382963578,2.11204537257339,2.54198485036584,1.32317038832977,2.14352128823924,4.19807509409354,1.68876189798836,1.90995750405018,2.62625439592098,1.1659233465194,11.1255181206306,0.341741761595705,2.88941615148511,2.22233432843654,1.13021074202815,0.683471138605126,1.60144721244566,7.81900777971734,10.3564074719507,10.7795979567451,0,3.63786392618306,3.45643094115643,2.05210147561422,2.71814784818809,3.27543845619266,3.50647300600534,5.04186079924549,1.83229159388821,4.66613903850454,0,5.07323644815771,3.13984746692355,4.13646226142744,4.27792614356905,3.09983576346555,2.87225413334323,10.3274370008263,4.6873578543822,8.07416952077974,12.3207901621263,8.92893019399383,8.84831137758899,4.05450430580328,4.10843828659309,12.6023198288461,8.23522800070415,6.35780335300048,9.61563596159751,6.4983391956814,5.55315474714812,8.07792150542998,7.25948532985252,8.47883562435846,9.23633679747163,8.76576766361767,3.40095575422817,4.21773311410723,1.43542170575161,1.84673078000486,2.31827512838629,3.00291960721891,3.47988086107804,2.35805216986972,2.00628841614145,9.60078132449013,9.66682996665071,7.44764167471216,6.70227411140382,11.6464028361009,12.0863023582352,7.42524750254986,11.2580300806055,6.34399372577886,6.21312374102184,0.207574695168353,3.99024873401031,3.07320490357441,1.45864030240976,1.88651846365184,2.5738091183002,4.88942801163553,2.88449080134452,3.53011130550997,2.77966932940177,2.28131369901216,2.45214243801899,1.68554713445788,2.94515701062399,2.29741875822453,5.23923060411381,2.20180219295225,2.31491064556446,3.29668720642645,3.09117732282234,2.05721551431249,3.19456451086807,2.38436189947321,4.0696996657052,3.01150017329058,2.70766745253365,3.65855945745545,3.6829759601298,2.58027816307137,0.561142271657738,2.84724043498018,2.06859412988683,2.45538625901814,3.40861050609125,2.50778594275484,5.24602213669686,3.97683734357194,7.09074478359384,8.41668661102911,1.98532277207564,3.2461496986859
|short_description=p2@Dgke
}}

Revision as of 07:41, 4 August 2015

Short description:p2@Dgke
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Dgke_5end
Coexpression cluster:NA
Association with transcript: 159bp_to_ENSMUST00000000285, ENSMUST00000152772, NM_019505_5end
EntrezGene:56077
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p2@Dgke

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G75.93
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.68
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I81.64
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E91.55
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E73.94
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F24.92
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.68
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.56
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E42.05
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E81.14
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.01
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A21.89
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A42.19
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A61.70
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A33.49
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H24.17
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I93.40
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.80
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D21.61
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.57
Ileum epithelium, pool2.CNhs13232.10253-104C10.76
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.67
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I36.99
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G66.77
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.87
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.66
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.41
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.42
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D85.04
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D92.53
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B32.39
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.54
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C32.14
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.84
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A21.34
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.73
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A13.36
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C12.83
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E12.58
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.03
Mouse Granule cells, donor1.CNhs12131.11713-123C36.07
Mouse Granule cells, donor2.CNhs12357.11731-123E34.76
Mouse Granule cells, donor3.CNhs12108.11636-122C73.80
Mouse Meningeal cells, donor1.CNhs12132.11716-123C62.37
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.90
Mouse Microglia, donor2.CNhs12634.11736-123E81.92
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D53.73
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F54.86
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.73
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F14.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D55.30
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D22.94
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.20
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D63.68
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D34.40
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F37.53
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D75.07
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D47.12
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F46.04
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.60
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E44.47
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E57.88
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I64.43
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D67.95
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F66.26
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E16.71
Mouse Schwann, donor1.CNhs12507.11728-123D92.04
Mouse Schwann, donor2.CNhs12573.11746-123F91.44
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G32.03
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F71.72
Mouse hepatocyte, donor1.CNhs13078.11714-123C41.36
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.30
Mouse hepatocyte, donor8.CNhs13091.11824-124F61.79
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.84
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.30
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G65.07
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G12.60
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G23.55
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G32.53
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.94
accessory axillary lymph node, adult.CNhs10475.1063-29H91.55
adrenal gland, adult.CNhs10508.49-24D74.60
adrenal gland, embryo E14.CNhs11038.406-44C53.30
adrenal gland, embryo E16.CNhs11004.1254-43D61.83
adrenal gland, embryo E17.CNhs11043.1263-45I10.92
adrenal gland, embryo E18.CNhs11026.1262-18F51.81
adrenal gland, neonate N00.CNhs11191.1311-23C19.41
adrenal gland, neonate N25.CNhs11223.1377-27I31.76
amnion, adult pregnant day17.5.CNhs10488.583-22A81.48
aorta, adult.CNhs10498.46-23H14.05
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F52.43
bone (os femoris), neonate N16.CNhs11225.1525-43A61.10
bone (os femoris), neonate N20.CNhs11195.1350-25C31.45
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B26.44
cerebellum, neonate N30.CNhs11135.1395-42I210.89
colon, adult.CNhs10468.36-18H70.51
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C74.55
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D14.80
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D44.96
corpora quadrigemina, adult.CNhs10501.16-22A45.84
corpus striatum, adult.CNhs10487.19-21D87.78
corpus striatum, neonate N00.CNhs11226.630-43F17.04
cortex, adult.CNhs10473.12-14D57.13
cortex, neonate N30.CNhs11107.1392-42F214.32
diencephalon, adult.CNhs10482.20-12F27.06
diencephalon, neonate N30.CNhs11201.1388-42B211.52
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B16.01
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A22.86
epididymis, adult.CNhs10490.58-23B25.56
eyeball, adult.CNhs10484.31-12G45.89
eyeball, embryo E12.CNhs11016.345-16C62.08
eyeball, embryo E14.CNhs10521.399-16E21.61
eyeball, embryo E15.CNhs10593.426-16C91.08
eyeball, embryo E17.CNhs11023.1261-18D42.56
eyeball, neonate N00.CNhs11207.633-15C68.98
eyeball, neonate N01.CNhs11140.1532-43E76.53
eyeball, neonate N02.CNhs11205.1551-44G85.90
eyeball, neonate N16.CNhs11188.777-19A216.30
forelimb, embryo E11.CNhs10596.335-25E23.45
forelimb, embryo E12.CNhs10600.359-14H21.32
forelimb, embryo E13.CNhs10589.384-1E22.82
forelimb, embryo E14.CNhs10577.413-26A82.85
forelimb, embryo E15.CNhs11007.437-20E72.22
forelimb, embryo E17.CNhs10598.1517-43C43.83
forelimb, embryo E18.CNhs11008.1520-43B52.26
gonad, embryo E13.CNhs11044.1564-45I62.99
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C81.40
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D22.57
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D52.27
heart, embryo E11.CNhs10586.331-24E94.76
heart, embryo E12.CNhs11015.353-12F53.52
heart, embryo E13.CNhs11013.376-3I93.60
heart, embryo E14.CNhs10597.403-26D45.45
heart, embryo E15.CNhs11017.431-16C85.12
heart, embryo E16.CNhs11021.457-17C64.63
heart, embryo E17.CNhs11025.479-18E56.05
heart, embryo E18.CNhs11030.1283-20G35.10
heart, neonate N00.CNhs11213.639-21E39.93
heart, neonate N03.CNhs11221.1349-25I26.42
heart, neonate N10.CNhs11118.749-24G14.10
heart, neonate N16.CNhs11209.782-15G16.73
heart, neonate N20.CNhs11127.821-26I66.58
heart, neonate N25.CNhs11196.1351-25D39.00
heart, neonate N30.CNhs11202.1390-42D215.03
hippocampus, adult.CNhs10478.13-16E86.94
hippocampus, neonate N00.CNhs11228.627-43G110.70
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I52.56
intestine, embryo E13.CNhs11010.381-16D52.09
intestine, embryo E15.CNhs10602.976-16D83.09
intestine, embryo E16.CNhs10585.463-22H42.22
intestine, embryo E17.CNhs10582.482-18D32.00
intestine, embryo E18.CNhs10526.1289-20F70.76
intestine, neonate N00.CNhs11126.644-26D10.95
intestine, neonate N01.CNhs11192.1322-23E92.80
intestine, neonate N06.CNhs11102.688-20B80.75
intestine, neonate N07.CNhs11095.720-20F22.39
intestine, neonate N10.CNhs11098.755-23A51.17
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E32.38
intestine, neonate N30.CNhs11131.1384-42G11.79
kidney, embryo E14.CNhs10606.411-4I91.90
kidney, embryo E15.CNhs10997.434-16F83.31
kidney, embryo E16.CNhs10584.464-22A56.76
kidney, embryo E17.CNhs11028.483-18I24.07
kidney, embryo E18.CNhs11001.1288-20C71.94
kidney, neonate N00.CNhs11214.646-21G76.73
kidney, neonate N10.CNhs11206.758-6D52.47
kidney, neonate N20.CNhs11113.832-19I11.92
kidney, neonate N25.CNhs11122.1353-25F31.41
kidney, neonate N30.CNhs11203.1385-42H13.21
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F81.00
liver, embryo E13.CNhs10524.378-3H61.38
liver, embryo E14.CNhs10594.409-16E10.67
liver, embryo E15.CNhs10520.433-16D70.41
liver, embryo E16.CNhs10523.462-17F50.48
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F42.11
liver, neonate N03.CNhs11123.1345-25G20.82
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H22.23
liver, neonate N10.CNhs11115.751-24B90.94
liver, neonate N20.CNhs11220.823-25A30.76
liver, neonate N25.CNhs11198.1368-26H10.72
liver, neonate N30.CNhs11106.1382-42D11.45
lung, adult.CNhs10474.28-22B15.17
lung, embryo E12.CNhs10522.354-16G22.84
lung, embryo E14.CNhs10604.404-26F83.59
lung, embryo E15.CNhs11020.432-17C53.73
lung, embryo E16.CNhs10998.458-17B65.63
lung, embryo E17.CNhs10605.480-44A64.52
lung, embryo E18.CNhs10583.1287-20I62.62
lung, neonate N00.CNhs11224.640-42C65.66
lung, neonate N06.CNhs11212.683-20E56.15
lung, neonate N07.CNhs11111.715-19A39.08
lung, neonate N10.CNhs11219.750-23E63.35
lung, neonate N20.CNhs11109.822-18A45.08
lung, neonate N25.CNhs11119.1359-25C73.45
lung, neonate N30.CNhs11133.1394-42H28.10
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A13.02
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A12.18
mammary gland, adult lactating day02.CNhs10480.595-22B61.97
mammary gland, adult pregnant day19.CNhs10476.588-5H21.66
medulla oblongata, adult.CNhs10477.17-12C26.42
medulla oblongata, neonate N30.CNhs11200.1396-42A310.20
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.98
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C26.56
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E14.10
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E22.34
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E37.97
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.43
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D83.34
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D92.26
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D52.92
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D64.74
olfactory brain, adult.CNhs10489.18-22I96.11
ovary, adult.CNhs10507.91-2I73.41
ovary, embryo E18.CNhs11040.505-44H73.74
ovary, neonate N00.CNhs11217.1299-22I414.33
oviduct, adult pregnant day01.CNhs10500.988-6G63.13
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F41.94
pancreas, embryo E15.CNhs11042.1556-45F22.12
pancreas, embryo E16.CNhs11003.460-26E51.51
pancreas, embryo E17.CNhs10599.1558-45G31.48
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G93.62
pancreas, neonate N01.CNhs11138.1531-43D75.45
pancreas, neonate N02.CNhs11139.1539-43D82.50
pancreas, neonate N16.CNhs11136.787-43B61.58
pancreas, neonate N25.CNhs11094.1555-45E22.11
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G89.87
pituitary gland, embryo E12.CNhs11018.346-16E61.80
pituitary gland, embryo E13.CNhs11009.370-44C72.85
pituitary gland, embryo E14.CNhs11037.398-44A52.36
pituitary gland, embryo E15.CNhs10592.427-16B94.08
pituitary gland, embryo E16.CNhs11036.449-43F65.35
pituitary gland, embryo E17.CNhs11039.1265-44F55.43
pituitary gland, neonate N00.CNhs11190.1308-22E97.00
placenta, adult pregnant day10.CNhs10472.539-13I72.11
placenta, adult pregnant day17.CNhs10464.577-18G32.54
prostate, adult.CNhs10470.859-1F81.32
skin, adult.CNhs10492.30-1C32.14
skin, neonate N00.CNhs11124.650-25G44.20
skin, neonate N03.CNhs11215.662-22H31.69
skin, neonate N06.CNhs11097.693-20I51.91
skin, neonate N10.CNhs11108.762-6C42.63
small intestine, neonate N16.CNhs11114.790-21I11.17
spinal cord, adult.CNhs10505.24-13C911.13
spleen, adult.CNhs10465.25-2G20.34
spleen, embryo E16.CNhs11035.461-43C12.89
spleen, embryo E18.CNhs11011.1271-21F22.22
spleen, neonate N10.CNhs11116.752-24D11.13
spleen, neonate N20.CNhs11112.824-19H10.68
spleen, neonate N25.CNhs11099.1354-25G31.60
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C67.82
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C910.36
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D310.78
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E33.64
stomach, embryo E15.CNhs10603.1252-16G83.46
stomach, embryo E16.CNhs11022.459-17D42.05
stomach, embryo E17.CNhs11006.1035-18D52.72
stomach, embryo E18.CNhs10999.1286-20C63.28
stomach, neonate N03.CNhs11193.1340-24B83.51
stomach, neonate N07.CNhs11210.718-18A95.04
stomach, neonate N25.CNhs11104.1355-25E41.83
stomach, neonate N30.CNhs11134.1386-42I14.67
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G55.07
testis, embryo E13.CNhs11031.389-23F53.14
testis, embryo E15.CNhs11034.443-27C54.14
testis, embryo E16.CNhs11033.470-26G54.28
testis, embryo E17.CNhs11029.486-18I53.10
testis, embryo E18.CNhs11027.503-18G52.87
testis, neonate N00.CNhs11189.1300-22B710.33
testis, neonate N07.CNhs11222.726-26I44.69
testis, neonate N10.CNhs11204.763-44D98.07
testis, neonate N20.CNhs11110.839-18H312.32
testis, neonate N30.CNhs11130.1391-42E28.93
thymus, adult.CNhs10471.38-12B58.85
thymus, embryo E14.CNhs11041.402-44I44.05
thymus, embryo E15.CNhs11005.430-45I24.11
thymus, embryo E16.CNhs11002.456-26C512.60
thymus, embryo E17.CNhs10581.478-18C18.24
thymus, embryo E18.CNhs10595.1273-19G46.36
thymus, neonate N02.CNhs11181.1541-43F89.62
thymus, neonate N03.CNhs11137.2104-43C76.50
thymus, neonate N06.CNhs11197.681-26C45.55
thymus, neonate N07.CNhs11211.713-19D38.08
thymus, neonate N10.CNhs11194.748-24E47.26
thymus, neonate N20.CNhs11186.820-7A28.48
thymus, neonate N25.CNhs11125.1362-25G79.24
thymus, neonate N30.CNhs11132.1393-42G28.77
tongue, adult.CNhs10499.32-1B43.40
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H34.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F71.44
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G51.85
urinary bladder, adult.CNhs10481.879-12E42.32
uterus, adult pregnant day19.CNhs10497.590-15F53.00
uterus, adult.CNhs10509.92-27E53.48
vagina, adult.CNhs10502.89-27D52.36
vesicular gland, adult.CNhs10491.51-27F82.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A19.60
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A29.67
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A37.45
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D76.70
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A411.65
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A512.09
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A67.43
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A711.26
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A86.34
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A96.21
whole body, embryo E11.CNhs11014.324-5I80.21
whole body, embryo E12.CNhs10587.857-27C93.99
whole body, embryo E13.CNhs10512.372-23H23.07
whole body, embryo E14.5.CNhs10578.420-27D21.46
whole body, embryo E14.CNhs10519.395-14B11.89
whole body, embryo E16.CNhs10514.453-14F22.57
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G54.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.88
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G53.53
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.78
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.28
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.45
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.69
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.95
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.30
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G55.24
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.20
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.31
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G53.30
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G53.09
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G53.19
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G54.07
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G53.01
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.71
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G53.66
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G53.68
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.58
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.85
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.07
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.46
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G53.41
whole body, embryo E17.5.CNhs10513.490-9F92.51
whole body, embryo E17.CNhs10517.475-3I55.25
whole body, embryo E18.CNhs10516.493-3B33.98
whole body, neonate N00.CNhs10525.657-19C27.09
whole body, neonate N01.CNhs10576.659-23C68.42
whole body, neonate N06.CNhs10515.692-21D11.99
whole body, neonate N10.CNhs10518.761-6B43.25





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
structure with developmental contribution from neural crest6.07e-1592
neurectoderm5.78e-1264
neural plate5.78e-1264
presumptive neural plate5.78e-1264
regional part of nervous system1.71e-1154
neural tube2.92e-1152
neural rod2.92e-1152
future spinal cord2.92e-1152
neural keel2.92e-1152
ecto-epithelium1.02e-1073
central nervous system7.42e-1073
brain1.39e-0947
future brain1.39e-0947
pre-chordal neural plate2.14e-0949
regional part of brain2.76e-0946
nervous system3.37e-0975
anterior neural tube4.26e-0940
regional part of forebrain7.90e-0939
forebrain7.90e-0939
future forebrain7.90e-0939
gray matter9.00e-0934
ectoderm-derived structure4.31e-0895
ectoderm4.31e-0895
presumptive ectoderm4.31e-0895
tube9.74e-08114
brain grey matter2.17e-0729
regional part of telencephalon2.17e-0729
telencephalon2.17e-0729
anatomical conduit3.50e-07122
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