Personal tools

FFCP PHASE1:Mm9::chr2:158526707..158526708,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
(Created page with "{{FFCP |id=chr2:158526707..158526708,+ |short_description=p@chr2:158526707..158526708,+ |description=CAGE_peak_at_chr2:158526707..158526708,+ |association_with_transcript=...")
 
No edit summary
 
(7 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr2:158526707..158526708,+
|DHSsupport=NA
|short_description=p@chr2:158526707..158526708,+
|DPIdataset=NA
|description=CAGE_peak_at_chr2:158526707..158526708,+
|association_with_transcript=NA
|EntrezGene=NA
|EntrezGene=NA
|HGNC=
|HGNC=
|MCL_coexpression_id=202
|TSSclassifier=NA
|UniProt=NA
|UniProt=NA
|association_with_transcript=NA
|cluster_id=chr2:158526707..158526708,+
|description=CAGE_peak_at_chr2:158526707..158526708,+
|id=chr2:158526707..158526708,+
|ontology_enrichment_celltype=CL:0000838!2.48e-07!12;CL:0000791!7.76e-07!9;CL:0000789!7.76e-07!9;CL:0002420!7.76e-07!9;CL:0002419!7.76e-07!9;CL:0000790!7.76e-07!9
|ontology_enrichment_celltype_v019_2=CL:0000791,1.37e-12,9;CL:0000789,1.37e-12,9;CL:0002420,1.37e-12,9;CL:0002419,1.37e-12,9;CL:0000790,1.37e-12,9;CL:0000838,9.46e-12,12;CL:0000893,3.18e-11,6;CL:0002489,3.18e-11,6;CL:0000898,3.18e-11,6;CL:0000809,3.18e-11,6;CL:0000810,3.18e-11,6;CL:0000895,3.18e-11,6;CL:0000808,3.18e-11,6;CL:0000894,3.18e-11,6;CL:0000806,3.18e-11,6;CL:0000807,3.18e-11,6;CL:0000805,3.18e-11,6;CL:0002425,3.18e-11,6;CL:0002436,3.18e-11,6;CL:0002427,3.18e-11,6;CL:0002428,3.18e-11,6;CL:0002429,3.18e-11,6;CL:0002433,3.18e-11,6;CL:0002431,3.18e-11,6;CL:0002432,3.18e-11,6;CL:0000624,5.33e-11,8;CL:0000542,1.07e-10,13;CL:0000051,1.07e-10,13;CL:0002031,1.46e-10,25;CL:0000084,5.18e-10,11;CL:0000827,5.18e-10,11;CL:0000738,1.00e-07,17;CL:0002087,1.00e-07,17;CL:0000988,1.48e-07,32;CL:0002032,1.48e-07,32;CL:0000037,1.48e-07,32;CL:0000837,1.48e-07,32
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004177!1.96e-09!29;UBERON:0001004!2.39e-09!42;UBERON:0000065!4.68e-09!41;UBERON:0003408!4.83e-09!24;UBERON:0002370!9.32e-09!23;UBERON:0000974!9.32e-09!23;UBERON:0004807!9.32e-09!23;UBERON:0005058!9.32e-09!23;UBERON:0003351!9.32e-09!23;UBERON:0009113!9.32e-09!23;UBERON:0003295!9.32e-09!23;UBERON:0009722!9.32e-09!23;UBERON:0005562!9.32e-09!23;UBERON:0007690!9.32e-09!23;UBERON:0006562!5.53e-08!24;UBERON:0001557!5.53e-08!24;UBERON:0001042!5.53e-08!24;UBERON:0008814!5.53e-08!24;UBERON:0009145!5.53e-08!24;UBERON:0000477!6.83e-08!154;UBERON:0002193!3.23e-07!48;UBERON:0007811!5.90e-07!86
|ontology_enrichment_uberon_v019_2=UBERON:0004177,5.91e-22,29;UBERON:0005057,5.91e-22,29;UBERON:0002193,3.19e-19,48;UBERON:0002405,3.19e-19,48;UBERON:0000077,3.30e-19,35;UBERON:0002390,3.66e-19,45;UBERON:0003061,3.66e-19,45;UBERON:0000065,5.14e-19,41;UBERON:0001004,2.06e-18,42;UBERON:0002370,3.03e-18,23;UBERON:0000974,3.03e-18,23;UBERON:0004807,3.03e-18,23;UBERON:0005058,3.03e-18,23;UBERON:0003351,3.03e-18,23;UBERON:0009113,3.03e-18,23;UBERON:0003295,3.03e-18,23;UBERON:0009722,3.03e-18,23;UBERON:0005562,3.03e-18,23;UBERON:0007690,3.03e-18,23;UBERON:0006562,2.65e-17,24;UBERON:0003408,2.65e-17,24;UBERON:0001557,2.65e-17,24;UBERON:0001042,2.65e-17,24;UBERON:0008814,2.65e-17,24;UBERON:0009145,2.65e-17,24;UBERON:0000072,6.70e-15,27;UBERON:0001041,1.46e-11,80;UBERON:0007811,3.98e-10,36;UBERON:0005911,7.24e-10,69;UBERON:0000153,7.93e-08,43;UBERON:0003081,1.07e-07,87
|phase1_expression=0,0,0,0,0,0,0.233612640595526,1.54947988129892,4.08287294239834,3.04283884218592,2.39705155515707,2.39316476986009,1.19840510951844,1.22388563386596,0.999329285446988,1.21485160433896,0,5.36285681109004,3.15363197293199,6.36584477697045,0.850432901510698,0.297872853602656,0.261199789138935,0.319984845586813,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0.332469290716985,0,0.418531630736908,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.71130424230945,0.725362142011344,2.01656279485478,0,0,0,0,0,0,0,0,0,0,0,0,0.384218305321555,0.103689612308478,0.270011876663381,0.210324961351382,0.571301968807607,0.441737081903227,0.122490799214954,0,0.919218786610021,0,0.127687338085188,0.307213066512487,0,0,0,0.279182999001381,1.12552522006336,0.763991238884051,0.294628585473668,0.569486723196412,0.186399445825301,0.075726193333184,0,1.44932244350839,0,0,0.539703191637817,0,0,0.280888840263504,0,0,0,0.14084341977668,0,0,0,0,0,0,0.22836775943812,1.29468941823586,0.593768556259299,0,0,0,0.301445281105245,0.117588707135705,0.125666591329675,0.247194967734374,0.289198713839823,0,0,0.441683036920787,0.969750506270444,0,0.878342391034642,0.209446706813455,0.255457055208591,0.479260498023681,0,0.127070227073065,0.748953197024114,3.20250421973039,0.376963056338593,1.04294592115366,0.255715457330331,1.66230435647648,1.1356888414743,0.101839363850316,0.248813941220186,0,0.210441855886474,0,0,0,0.30140963567143,0.136072998302656,0.2562274405697,0.281105173679186,0.776110112217047,0,0,0,0,0,0.348252166522167,0,0.796137067273973,0,0,0,0,0.469052119962192,0.180062061461015,0,0.196764231747404,0.308534225774757,0.232533944750408,0,0,0,0.820837320395476,0.324275238183423,0.584799949701329,0.439100230582101,0.671032093801859,0.841159794256509,0.102904612379284,0.991256348951394,0,0,0,0.257734922644187,0,0,0,0,0,0,0.397912944082302,0.19496408711912,0.898819408654221,0,0,0.189667900953082,0.342745537829186,0,0.203651327845314,0.193952487167626,0.280543279561274,0.442655759869801,1.03327103585722,1.09899109488962,0,0.296452627087149,0,0,0,0,0,0,0.575392274901621,0.324270453550071,0.823684239564244,0,0,0.624075346229121,0,0.179397413521912,0,0.923765950833023,0,0,0,0.469380496577004,1.17254380209271,2.14239276797412,0.780534591431195,1.26108115284953,0.664394068946325,1.11618338060241,2.94953966488328,1.20879487306127,2.4590339958857,0,0,0,0,1.12385412991454,0.234423373184406,0,0,0.315508219416257,0,0,0,0.222798674082394,0,0,0,0,1.28528526568723,0.567760340833074,0,0,0.329940245945071,0,0,0,0,0,0.614870295887855,0,0,0,0,0,0,0,0,0.129358683782755,0,0,0.178368817602071,0.164549020602121,0,0,0.21183207086382,0,0,0.161464426695906,0.180938774784468,0.119372344003136,0.328281799490123,0.582961673259701,1.29797711407357,1.53783792718067,0,0,1.69531611304222,1.77702496037333,1.14389086603261,0.679913719975421,0.419854356970974,0.414599921413271,0,0,0,0.108005340821801,0,0,0.269728692769641,0.165306911450672,0,0,0.621339313086926,0,0.598066184175915,0.66183396182839,0.388902376688095,0.645799117388655,1.01373675294467,0.58678619322877,1.3020438484395,0.209718688851422,0,0.576060012515731,1.58005560314089,0.202725215290164,0.102710957164827,0.77952493786677,0.716106782669926,1.39076948346885,2.76449533895928,2.95379054349154,1.21159739937777,2.057583779685,2.41982844328417,3.50848370663109,2.88635524920988,3.62318396762864,0,0,0,0,0,0.187682475451182,0,0.214368379079066,0,1.12950368523413,0,0.572895513439397,0.515559547031063,0.685082519770642,1.5107877947794,0.675022500231806,1.35096360967266,0.453142408984205,0,0,0,0.170733605754134,0,0,0,0.44449345560323,0.206035057238894,0,0.505394423527595,0.25347929989024,0.188626341386076,0.655490552289177,0.0640251524048693,0.287177344778066,0.476293691283074,0.115884325944855,0.38581844092741,0,0,0.685738504770831,0.354951612318675,0,0.145346416632329,0.282328141245992,0.169229215783353,0.182927972872773,0,0.271608227691724,0,0.118635018124174,0.197008964751127,0,0,0.192906610981141,0,0.935726433781634,0.214871054048298,0.191288332068843,0.220591419119515,0.463735671240843
|phase1_expression=0,0,0,0,0,0,0.233612640595526,1.54947988129892,4.08287294239834,3.04283884218592,2.39705155515707,2.39316476986009,1.19840510951844,1.22388563386596,0.999329285446988,1.21485160433896,0,5.36285681109004,3.15363197293199,6.36584477697045,0.850432901510698,0.297872853602656,0.261199789138935,0.319984845586813,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0.332469290716985,0,0.418531630736908,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.71130424230945,0.725362142011344,2.01656279485478,0,0,0,0,0,0,0,0,0,0,0,0,0.384218305321555,0.103689612308478,0.270011876663381,0.210324961351382,0.571301968807607,0.441737081903227,0.122490799214954,0,0.919218786610021,0,0.127687338085188,0.307213066512487,0,0,0,0.279182999001381,1.12552522006336,0.763991238884051,0.294628585473668,0.569486723196412,0.186399445825301,0.075726193333184,0,1.44932244350839,0,0,0.539703191637817,0,0,0.280888840263504,0,0,0,0.14084341977668,0,0,0,0,0,0,0.22836775943812,1.29468941823586,0.593768556259299,0,0,0,0.301445281105245,0.117588707135705,0.125666591329675,0.247194967734374,0.289198713839823,0,0,0.441683036920787,0.969750506270444,0,0.878342391034642,0.209446706813455,0.255457055208591,0.479260498023681,0,0.127070227073065,0.748953197024114,3.20250421973039,0.376963056338593,1.04294592115366,0.255715457330331,1.66230435647648,1.1356888414743,0.101839363850316,0.248813941220186,0,0.210441855886474,0,0,0,0.30140963567143,0.136072998302656,0.2562274405697,0.281105173679186,0.776110112217047,0,0,0,0,0,0.348252166522167,0,0.796137067273973,0,0,0,0,0.469052119962192,0.180062061461015,0,0.196764231747404,0.308534225774757,0.232533944750408,0,0,0,0.820837320395476,0.324275238183423,0.584799949701329,0.439100230582101,0.671032093801859,0.841159794256509,0.102904612379284,0.991256348951394,0,0,0,0.257734922644187,0,0,0,0,0,0,0.397912944082302,0.19496408711912,0.898819408654221,0,0,0.189667900953082,0.342745537829186,0,0.203651327845314,0.193952487167626,0.280543279561274,0.442655759869801,1.03327103585722,1.09899109488962,0,0.296452627087149,0,0,0,0,0,0,0.575392274901621,0.324270453550071,0.823684239564244,0,0,0.624075346229121,0,0.179397413521912,0,0.923765950833023,0,0,0,0.469380496577004,1.17254380209271,2.14239276797412,0.780534591431195,1.26108115284953,0.664394068946325,1.11618338060241,2.94953966488328,1.20879487306127,2.4590339958857,0,0,0,0,1.12385412991454,0.234423373184406,0,0,0.315508219416257,0,0,0,0.222798674082394,0,0,0,0,1.28528526568723,0.567760340833074,0,0,0.329940245945071,0,0,0,0,0,0.614870295887855,0,0,0,0,0,0,0,0,0.129358683782755,0,0,0.178368817602071,0.164549020602121,0,0,0.21183207086382,0,0,0.161464426695906,0.180938774784468,0.119372344003136,0.328281799490123,0.582961673259701,1.29797711407357,1.53783792718067,0,0,1.69531611304222,1.77702496037333,1.14389086603261,0.679913719975421,0.419854356970974,0.414599921413271,0,0,0,0.108005340821801,0,0,0.269728692769641,0.165306911450672,0,0,0.621339313086926,0,0.598066184175915,0.66183396182839,0.388902376688095,0.645799117388655,1.01373675294467,0.58678619322877,1.3020438484395,0.209718688851422,0,0.576060012515731,1.58005560314089,0.202725215290164,0.102710957164827,0.77952493786677,0.716106782669926,1.39076948346885,2.76449533895928,2.95379054349154,1.21159739937777,2.057583779685,2.41982844328417,3.50848370663109,2.88635524920988,3.62318396762864,0,0,0,0,0,0.187682475451182,0,0.214368379079066,0,1.12950368523413,0,0.572895513439397,0.515559547031063,0.685082519770642,1.5107877947794,0.675022500231806,1.35096360967266,0.453142408984205,0,0,0,0.170733605754134,0,0,0,0.44449345560323,0.206035057238894,0,0.505394423527595,0.25347929989024,0.188626341386076,0.655490552289177,0.0640251524048693,0.287177344778066,0.476293691283074,0.115884325944855,0.38581844092741,0,0,0.685738504770831,0.354951612318675,0,0.145346416632329,0.282328141245992,0.169229215783353,0.182927972872773,0,0.271608227691724,0,0.118635018124174,0.197008964751127,0,0,0.192906610981141,0,0.935726433781634,0.214871054048298,0.191288332068843,0.220591419119515,0.463735671240843
|short_description=p@chr2:158526707..158526708,+
}}
}}

Latest revision as of 10:32, 4 August 2015

Short description:p@chr2:158526707..158526708, +
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_at_chr2:158526707..158526708, +
Coexpression cluster:MCL_coexpression_mm9:202
Association with transcript: NA
EntrezGene:NA
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p@chr2:158526707..158526708+

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E91.55
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E74.08
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F23.04
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E62.40
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F12.39
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E41.20
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E81.22
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.21
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A25.36
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A43.15
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A66.37
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.85
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.30
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.26
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.32
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.33
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.42
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A26.71
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.73
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A12.02
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.10
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.27
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.44
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.12
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.13
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.31
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.28
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.76
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.29
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.57
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.19
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.45
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.23
accessory axillary lymph node, adult.CNhs10475.1063-29H91.29
adrenal gland, adult.CNhs10508.49-24D70.59
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.12
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.29
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.44
bone (os femoris), neonate N20.CNhs11195.1350-25C30.97
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.88
cerebellum, neonate N30.CNhs11135.1395-42I20.21
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.48
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.13
corpora quadrigemina, adult.CNhs10501.16-22A40.75
corpus striatum, adult.CNhs10487.19-21D83.20
corpus striatum, neonate N00.CNhs11226.630-43F10.38
cortex, adult.CNhs10473.12-14D51.04
cortex, neonate N30.CNhs11107.1392-42F20.26
diencephalon, adult.CNhs10482.20-12F21.66
diencephalon, neonate N30.CNhs11201.1388-42B21.14
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.25
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.30
eyeball, neonate N00.CNhs11207.633-15C60.14
eyeball, neonate N01.CNhs11140.1532-43E70.26
eyeball, neonate N02.CNhs11205.1551-44G80.28
eyeball, neonate N16.CNhs11188.777-19A20.78
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.80
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.31
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.82
heart, neonate N16.CNhs11209.782-15G10.32
heart, neonate N20.CNhs11127.821-26I60.58
heart, neonate N25.CNhs11196.1351-25D30.44
heart, neonate N30.CNhs11202.1390-42D20.67
hippocampus, adult.CNhs10478.13-16E80.84
hippocampus, neonate N00.CNhs11228.627-43G10.10
intestinal mucosa, adult.CNhs10506.860-29I30.99
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.34
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.28
kidney, neonate N10.CNhs11206.758-6D50.44
kidney, neonate N20.CNhs11113.832-19I11.03
kidney, neonate N25.CNhs11122.1353-25F31.10
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.58
liver, neonate N00.CNhs11117.641-24F40.32
liver, neonate N03.CNhs11123.1345-25G20.82
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.62
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.92
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A61.17
lung, embryo E18.CNhs10583.1287-20I62.14
lung, neonate N00.CNhs11224.640-42C60.78
lung, neonate N06.CNhs11212.683-20E51.26
lung, neonate N07.CNhs11111.715-19A30.66
lung, neonate N10.CNhs11219.750-23E61.12
lung, neonate N20.CNhs11109.822-18A42.95
lung, neonate N25.CNhs11119.1359-25C71.21
lung, neonate N30.CNhs11133.1394-42H22.46
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C21.12
medulla oblongata, neonate N30.CNhs11200.1396-42A30.23
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I91.29
ovary, adult.CNhs10507.91-2I70.57
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.33
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.16
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.18
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.33
small intestine, neonate N16.CNhs11114.790-21I10.58
spinal cord, adult.CNhs10505.24-13C91.30
spleen, adult.CNhs10465.25-2G21.54
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D11.70
spleen, neonate N20.CNhs11112.824-19H11.78
spleen, neonate N25.CNhs11099.1354-25G31.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.68
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.42
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.41
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.27
stomach, neonate N07.CNhs11210.718-18A90.17
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.60
testis, embryo E15.CNhs11034.443-27C50.66
testis, embryo E16.CNhs11033.470-26G50.39
testis, embryo E17.CNhs11029.486-18I50.65
testis, embryo E18.CNhs11027.503-18G51.01
testis, neonate N00.CNhs11189.1300-22B70.59
testis, neonate N07.CNhs11222.726-26I41.30
testis, neonate N10.CNhs11204.763-44D90.21
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.58
thymus, adult.CNhs10471.38-12B51.58
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.78
thymus, embryo E17.CNhs10581.478-18C10.72
thymus, embryo E18.CNhs10595.1273-19G41.39
thymus, neonate N02.CNhs11181.1541-43F82.76
thymus, neonate N03.CNhs11137.2104-43C72.95
thymus, neonate N06.CNhs11197.681-26C41.21
thymus, neonate N07.CNhs11211.713-19D32.06
thymus, neonate N10.CNhs11194.748-24E42.42
thymus, neonate N20.CNhs11186.820-7A23.51
thymus, neonate N25.CNhs11125.1362-25G72.89
thymus, neonate N30.CNhs11132.1393-42G23.62
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.13
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.52
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51.51
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.35
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.66
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.06
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.12
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.17
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.27
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.12
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.20
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.00
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B30.94
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.46





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
mature alpha-beta T cell1.37e-129
alpha-beta T cell1.37e-129
immature T cell1.37e-129
mature T cell1.37e-129
immature alpha-beta T cell1.37e-129
lymphoid lineage restricted progenitor cell9.46e-1212
thymocyte3.18e-116
double negative thymocyte3.18e-116
naive T cell3.18e-116
double-positive, alpha-beta thymocyte3.18e-116
CD4-positive, alpha-beta thymocyte3.18e-116
naive thymus-derived CD4-positive, alpha-beta T cell3.18e-116
DN4 thymocyte3.18e-116
DN1 thymic pro-T cell3.18e-116
DN2 thymocyte3.18e-116
DN3 thymocyte3.18e-116
immature single positive thymocyte3.18e-116
early T lineage precursor3.18e-116
mature CD4 single-positive thymocyte3.18e-116
resting double-positive thymocyte3.18e-116
double-positive blast3.18e-116
CD69-positive double-positive thymocyte3.18e-116
CD69-positive, CD4-positive single-positive thymocyte3.18e-116
CD4-positive, CD8-intermediate double-positive thymocyte3.18e-116
CD24-positive, CD4 single-positive thymocyte3.18e-116
CD4-positive, alpha-beta T cell5.33e-118
lymphocyte1.07e-1013
common lymphoid progenitor1.07e-1013
hematopoietic lineage restricted progenitor cell1.46e-1025
T cell5.18e-1011
pro-T cell5.18e-1011
leukocyte1.00e-0717
nongranular leukocyte1.00e-0717
hematopoietic cell1.48e-0732
hematopoietic oligopotent progenitor cell1.48e-0732
hematopoietic stem cell1.48e-0732
hematopoietic multipotent progenitor cell1.48e-0732

Uber anatomy
Ontology termp-valuen
hemopoietic organ5.91e-2229
immune organ5.91e-2229
hemolymphoid system3.19e-1948
immune system3.19e-1948
mixed endoderm/mesoderm-derived structure3.30e-1935
hematopoietic system3.66e-1945
blood island3.66e-1945
respiratory tract5.14e-1941
respiratory system2.06e-1842
thymus3.03e-1823
neck3.03e-1823
respiratory system epithelium3.03e-1823
hemolymphoid system gland3.03e-1823
pharyngeal epithelium3.03e-1823
thymic region3.03e-1823
pharyngeal gland3.03e-1823
entire pharyngeal arch endoderm3.03e-1823
thymus primordium3.03e-1823
early pharyngeal endoderm3.03e-1823
pharynx2.65e-1724
gland of gut2.65e-1724
upper respiratory tract2.65e-1724
chordate pharynx2.65e-1724
pharyngeal arch system2.65e-1724
pharyngeal region of foregut2.65e-1724
segment of respiratory tract6.70e-1527
foregut1.46e-1180
craniocervical region3.98e-1036
endo-epithelium7.24e-1069
anterior region of body7.93e-0843
lateral plate mesoderm1.07e-0787
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr2:158526707..158526708,%2B&oldid=3767537"