FFCP PHASE1:Mm9::chr12:102075624..102075643,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=177 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:102075624..102075643,- | |||
|description=CAGE_peak_at_chr12:102075624..102075643,- | |description=CAGE_peak_at_chr12:102075624..102075643,- | ||
|id=chr12:102075624..102075643,- | |id=chr12:102075624..102075643,- | ||
|ontology_enrichment_celltype=CL:0000988!8.16e-12!32;CL:0002032!8.16e-12!32;CL:0000037!8.16e-12!32;CL:0000566!8.16e-12!32;CL:0000837!8.16e-12!32;CL:0002031!1.75e-10!25;CL:0000838!1.90e-09!12;CL:0000738!4.84e-09!17;CL:0002087!4.84e-09!17;CL:0000084!1.39e-08!11;CL:0000827!1.39e-08!11;CL:0000542!2.21e-08!13;CL:0000051!2.21e-08!13;CL:0000791!6.67e-07!9;CL:0000789!6.67e-07!9;CL:0002420!6.67e-07!9;CL:0002419!6.67e-07!9;CL:0000790!6.67e-07!9 | |ontology_enrichment_celltype=CL:0000988!8.16e-12!32;CL:0002032!8.16e-12!32;CL:0000037!8.16e-12!32;CL:0000566!8.16e-12!32;CL:0000837!8.16e-12!32;CL:0002031!1.75e-10!25;CL:0000838!1.90e-09!12;CL:0000738!4.84e-09!17;CL:0002087!4.84e-09!17;CL:0000084!1.39e-08!11;CL:0000827!1.39e-08!11;CL:0000542!2.21e-08!13;CL:0000051!2.21e-08!13;CL:0000791!6.67e-07!9;CL:0000789!6.67e-07!9;CL:0002420!6.67e-07!9;CL:0002419!6.67e-07!9;CL:0000790!6.67e-07!9 | ||
|ontology_enrichment_celltype_v019_2=CL:0002031,3.70e-15,25;CL:0000988,1.21e-14,32;CL:0002032,1.21e-14,32;CL:0000037,1.21e-14,32;CL:0000837,1.21e-14,32;CL:0000838,1.29e-13,12;CL:0000542,1.93e-12,13;CL:0000051,1.93e-12,13;CL:0000084,1.15e-11,11;CL:0000827,1.15e-11,11;CL:0000738,1.72e-11,17;CL:0002087,1.72e-11,17;CL:0002320,4.53e-09,46;CL:0000134,4.53e-09,46;CL:0000791,5.42e-08,9;CL:0000789,5.42e-08,9;CL:0002420,5.42e-08,9;CL:0002419,5.42e-08,9;CL:0000790,5.42e-08,9;CL:0000219,3.32e-07,54;CL:0000553,9.74e-07,6;CL:0000556,9.74e-07,6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2=DOID:0060100,3.65e-08,3;DOID:4045,3.65e-08,3 | |||
|ontology_enrichment_uberon=UBERON:0002193!1.20e-19!48;UBERON:0002390!6.49e-19!45;UBERON:0003061!6.49e-19!45;UBERON:0002405!3.00e-16!70;UBERON:0004177!2.26e-15!29;UBERON:0003408!5.03e-12!24;UBERON:0006562!1.51e-11!24;UBERON:0001557!1.51e-11!24;UBERON:0001042!1.51e-11!24;UBERON:0008814!1.51e-11!24;UBERON:0009145!1.51e-11!24;UBERON:0002370!2.56e-11!23;UBERON:0000974!2.56e-11!23;UBERON:0004807!2.56e-11!23;UBERON:0005058!2.56e-11!23;UBERON:0003351!2.56e-11!23;UBERON:0009113!2.56e-11!23;UBERON:0003295!2.56e-11!23;UBERON:0009722!2.56e-11!23;UBERON:0005562!2.56e-11!23;UBERON:0007690!2.56e-11!23;UBERON:0005057!2.98e-11!51;UBERON:0003081!2.68e-10!88;UBERON:0001004!7.94e-10!42;UBERON:0000072!2.09e-09!27;UBERON:0000065!3.09e-09!41;UBERON:0000926!1.40e-07!193;UBERON:0004120!1.40e-07!193;UBERON:0006603!1.40e-07!193;UBERON:0001041!8.67e-07!92 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,8.41e-20,48;UBERON:0002405,8.41e-20,48;UBERON:0002390,3.39e-19,45;UBERON:0003061,3.39e-19,45;UBERON:0004177,7.07e-16,29;UBERON:0005057,7.07e-16,29;UBERON:0000077,1.58e-12,35;UBERON:0003408,2.55e-12,24;UBERON:0002370,5.84e-11,23;UBERON:0000974,5.84e-11,23;UBERON:0004807,5.84e-11,23;UBERON:0005058,5.84e-11,23;UBERON:0003351,5.84e-11,23;UBERON:0009113,5.84e-11,23;UBERON:0003295,5.84e-11,23;UBERON:0009722,5.84e-11,23;UBERON:0005562,5.84e-11,23;UBERON:0007690,5.84e-11,23;UBERON:0006562,2.12e-10,24;UBERON:0001557,2.12e-10,24;UBERON:0001042,2.12e-10,24;UBERON:0008814,2.12e-10,24;UBERON:0009145,2.12e-10,24;UBERON:0002384,4.53e-09,46;UBERON:0000072,5.63e-09,27;UBERON:0003081,1.91e-08,87;UBERON:0007811,2.55e-07,36;UBERON:0000926,5.57e-07,120;UBERON:0004120,5.57e-07,120;UBERON:0006603,5.57e-07,120 | |||
|phase1_expression=0,0,0,0,0,0,0,1.29123323441576,0.422366166455,0.234064526321993,1.19852577757853,1.43589886191606,1.02720437958723,1.22388563386596,0.999329285446988,1.01237633694913,0,6.46697438984387,9.32378148519024,5.51706547337439,0,2.18440092641948,4.4403964153619,0.639969691173627,0,0,0,0,0,0,0,0,0,0,0,0,0,4.18531630736908,5.4693474116666,4.18818995179039,11.7646297606203,5.46436387966757,7.2826552954673,0,0,0,0,0,0,0,0,0,4.36234775750115,0.725362142011344,1.68046899571232,0,0,0,0,0,0,0,0,0,0.988866362566974,0,0.299600110518405,0.384218305321555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.22836775943812,10.616453229534,0.148442139064825,0,0.304465478312141,0,0,0,0.125666591329675,0,0.289198713839823,2.65383165584962,0.323533699894818,0.441683036920787,0.969750506270444,0,0,0,0,0.718890747035522,1.19980546198682,0.381210681219194,0,0,0,0,0,0,0,0,0.497627882440372,0,0.210441855886474,0,0,0,0,0,0,0,0.258703370739016,0,0,0.175951124163949,0,0,0,0,0,0,1.02939162845886,0.568326998791185,0,0,0.180062061461015,0,0,0,0.232533944750408,0,0,0,0,0.0810688095458557,0,0.439100230582101,0,0,0,0,0.264450566663544,0,0,0.128867461322093,0,0.22237804384487,0,0,0,0,0,0.38992817423824,0.898819408654221,0,0.199141273254367,0,0.114248512609729,1.1270773567308,0,0,0,0,0.147610147979602,0,0,0,0.333690211432188,0.196558995113203,0.449724224769707,0.608580364165509,0.482354319504834,0.25462585178142,1.15078454980324,0,0,1.43768206527355,0,0,0.252578877947112,0,0,0.923765950833023,0,0,0,0,0.167506257441816,0.238043640886014,0,0.315270288212382,0,0.159454768657487,0.655453258862952,0.863424909329478,0.578596234326046,4.52373851817817,0,0,0.827810238914197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0,0.329940245945071,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0.16488625294148,0,0.120625849856312,0,0,0.291480836629851,0,4.61351378154202,0.206386867963223,0.925972636848558,1.50694765603753,3.41735569302563,2.0590035588587,0.339956859987711,0.419854356970974,0.138199973804424,0,0,0,0,0,0.218362563746178,0,0,0.26175594198403,0,1.24267862617385,0,0,0,0.194451188344048,0,0,0,0,0,0,0,1.58005560314089,1.41907650703115,1.74608627180206,1.16928740680016,0.895133478337407,0.79472541912506,0.961563596159751,1.03382669022204,1.31256384932592,0.762068066549998,1.51239277705261,1.26695244961678,0.673482891482306,0.935015217452552,0.226730383615211,0,0,0,0,0.375364950902364,0.549454872801795,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341467211508268,0,0,0,0,0,0,0.252697211763798,0.25347929989024,0,0.0936415074698824,0,0,0,0.115884325944855,0,0.824171801606613,0,0,0,0,0.290692833264657,0.0941093804153306,0,0.182927972872773,0,0,0,0,0.0985044823755635,0,0.154936841185966,0.385813221962283,0,0,0,0,0,0.231867835620421 | |phase1_expression=0,0,0,0,0,0,0,1.29123323441576,0.422366166455,0.234064526321993,1.19852577757853,1.43589886191606,1.02720437958723,1.22388563386596,0.999329285446988,1.01237633694913,0,6.46697438984387,9.32378148519024,5.51706547337439,0,2.18440092641948,4.4403964153619,0.639969691173627,0,0,0,0,0,0,0,0,0,0,0,0,0,4.18531630736908,5.4693474116666,4.18818995179039,11.7646297606203,5.46436387966757,7.2826552954673,0,0,0,0,0,0,0,0,0,4.36234775750115,0.725362142011344,1.68046899571232,0,0,0,0,0,0,0,0,0,0.988866362566974,0,0.299600110518405,0.384218305321555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.22836775943812,10.616453229534,0.148442139064825,0,0.304465478312141,0,0,0,0.125666591329675,0,0.289198713839823,2.65383165584962,0.323533699894818,0.441683036920787,0.969750506270444,0,0,0,0,0.718890747035522,1.19980546198682,0.381210681219194,0,0,0,0,0,0,0,0,0.497627882440372,0,0.210441855886474,0,0,0,0,0,0,0,0.258703370739016,0,0,0.175951124163949,0,0,0,0,0,0,1.02939162845886,0.568326998791185,0,0,0.180062061461015,0,0,0,0.232533944750408,0,0,0,0,0.0810688095458557,0,0.439100230582101,0,0,0,0,0.264450566663544,0,0,0.128867461322093,0,0.22237804384487,0,0,0,0,0,0.38992817423824,0.898819408654221,0,0.199141273254367,0,0.114248512609729,1.1270773567308,0,0,0,0,0.147610147979602,0,0,0,0.333690211432188,0.196558995113203,0.449724224769707,0.608580364165509,0.482354319504834,0.25462585178142,1.15078454980324,0,0,1.43768206527355,0,0,0.252578877947112,0,0,0.923765950833023,0,0,0,0,0.167506257441816,0.238043640886014,0,0.315270288212382,0,0.159454768657487,0.655453258862952,0.863424909329478,0.578596234326046,4.52373851817817,0,0,0.827810238914197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0,0.329940245945071,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0.16488625294148,0,0.120625849856312,0,0,0.291480836629851,0,4.61351378154202,0.206386867963223,0.925972636848558,1.50694765603753,3.41735569302563,2.0590035588587,0.339956859987711,0.419854356970974,0.138199973804424,0,0,0,0,0,0.218362563746178,0,0,0.26175594198403,0,1.24267862617385,0,0,0,0.194451188344048,0,0,0,0,0,0,0,1.58005560314089,1.41907650703115,1.74608627180206,1.16928740680016,0.895133478337407,0.79472541912506,0.961563596159751,1.03382669022204,1.31256384932592,0.762068066549998,1.51239277705261,1.26695244961678,0.673482891482306,0.935015217452552,0.226730383615211,0,0,0,0,0.375364950902364,0.549454872801795,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341467211508268,0,0,0,0,0,0,0.252697211763798,0.25347929989024,0,0.0936415074698824,0,0,0,0.115884325944855,0,0.824171801606613,0,0,0,0,0.290692833264657,0.0941093804153306,0,0.182927972872773,0,0,0,0,0.0985044823755635,0,0.154936841185966,0.385813221962283,0,0,0,0,0,0.231867835620421 | ||
|short_description=p@chr12:102075624..102075643,- | |short_description=p@chr12:102075624..102075643,- | ||
}} | }} |
Latest revision as of 14:10, 4 August 2015
Short description: | p@chr12:102075624..102075643, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:102075624..102075643, - |
Coexpression cluster: | MCL_coexpression_mm9:177 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic lineage restricted progenitor cell | 3.70e-15 | 25 |
hematopoietic cell | 1.21e-14 | 32 |
hematopoietic oligopotent progenitor cell | 1.21e-14 | 32 |
hematopoietic stem cell | 1.21e-14 | 32 |
hematopoietic multipotent progenitor cell | 1.21e-14 | 32 |
lymphoid lineage restricted progenitor cell | 1.29e-13 | 12 |
lymphocyte | 1.93e-12 | 13 |
common lymphoid progenitor | 1.93e-12 | 13 |
T cell | 1.15e-11 | 11 |
pro-T cell | 1.15e-11 | 11 |
leukocyte | 1.72e-11 | 17 |
nongranular leukocyte | 1.72e-11 | 17 |
connective tissue cell | 4.53e-09 | 46 |
mesenchymal cell | 4.53e-09 | 46 |
mature alpha-beta T cell | 5.42e-08 | 9 |
alpha-beta T cell | 5.42e-08 | 9 |
immature T cell | 5.42e-08 | 9 |
mature T cell | 5.42e-08 | 9 |
immature alpha-beta T cell | 5.42e-08 | 9 |
motile cell | 3.32e-07 | 54 |
megakaryocyte progenitor cell | 9.74e-07 | 6 |
megakaryocyte | 9.74e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 8.41e-20 | 48 |
immune system | 8.41e-20 | 48 |
hematopoietic system | 3.39e-19 | 45 |
blood island | 3.39e-19 | 45 |
hemopoietic organ | 7.07e-16 | 29 |
immune organ | 7.07e-16 | 29 |
mixed endoderm/mesoderm-derived structure | 1.58e-12 | 35 |
gland of gut | 2.55e-12 | 24 |
thymus | 5.84e-11 | 23 |
neck | 5.84e-11 | 23 |
respiratory system epithelium | 5.84e-11 | 23 |
hemolymphoid system gland | 5.84e-11 | 23 |
pharyngeal epithelium | 5.84e-11 | 23 |
thymic region | 5.84e-11 | 23 |
pharyngeal gland | 5.84e-11 | 23 |
entire pharyngeal arch endoderm | 5.84e-11 | 23 |
thymus primordium | 5.84e-11 | 23 |
early pharyngeal endoderm | 5.84e-11 | 23 |
pharynx | 2.12e-10 | 24 |
upper respiratory tract | 2.12e-10 | 24 |
chordate pharynx | 2.12e-10 | 24 |
pharyngeal arch system | 2.12e-10 | 24 |
pharyngeal region of foregut | 2.12e-10 | 24 |
connective tissue | 4.53e-09 | 46 |
segment of respiratory tract | 5.63e-09 | 27 |
lateral plate mesoderm | 1.91e-08 | 87 |
craniocervical region | 2.55e-07 | 36 |
mesoderm | 5.57e-07 | 120 |
mesoderm-derived structure | 5.57e-07 | 120 |
presumptive mesoderm | 5.57e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 3.65e-08 | 3 |
muscle cancer | 3.65e-08 | 3 |