FFCP PHASE1:Mm9::chr7:150239284..150239364,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene= | |EntrezGene= | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=398 | |MCL_coexpression_id=398 | ||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENSMUST00000133630_5end | |association_with_transcript=0bp_to_ENSMUST00000133630_5end | ||
|cluster_id=chr7:150239284..150239364,- | |||
|description=CAGE_peak_1_at_ENSMUST00000133630_5end | |description=CAGE_peak_1_at_ENSMUST00000133630_5end | ||
|id=chr7:150239284..150239364,- | |id=chr7:150239284..150239364,- | ||
|ontology_enrichment_celltype=CL:0000221!4.37e-15!44;CL:0000133!4.37e-15!44;CL:0002319!6.24e-15!43;CL:0000055!5.81e-14!50;CL:0000540!2.02e-12!33;CL:0000047!2.02e-12!33;CL:0000031!2.02e-12!33;CL:0000404!2.02e-12!33;CL:0000393!6.74e-12!39;CL:0000211!6.74e-12!39;CL:0000117!1.13e-10!23;CL:0000337!1.13e-10!23 | |ontology_enrichment_celltype=CL:0000221!4.37e-15!44;CL:0000133!4.37e-15!44;CL:0002319!6.24e-15!43;CL:0000055!5.81e-14!50;CL:0000540!2.02e-12!33;CL:0000047!2.02e-12!33;CL:0000031!2.02e-12!33;CL:0000404!2.02e-12!33;CL:0000393!6.74e-12!39;CL:0000211!6.74e-12!39;CL:0000117!1.13e-10!23;CL:0000337!1.13e-10!23 | ||
|ontology_enrichment_celltype_v019_2=CL:0000221,2.95e-15,44;CL:0000133,2.95e-15,44;CL:0002319,4.23e-15,43;CL:0000540,1.47e-12,33;CL:0000047,1.47e-12,33;CL:0000031,1.47e-12,33;CL:0000404,1.47e-12,33;CL:0000393,4.99e-12,39;CL:0000211,4.99e-12,39;CL:0000117,8.68e-11,23;CL:0000337,8.68e-11,23 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!4.39e-25!73;UBERON:0005743!4.39e-25!73;UBERON:0000073!6.45e-25!75;UBERON:0001016!6.45e-25!75;UBERON:0004121!1.61e-23!102;UBERON:0000924!1.61e-23!102;UBERON:0006601!1.61e-23!102;UBERON:0002346!3.13e-21!71;UBERON:0003075!3.13e-21!71;UBERON:0007284!3.13e-21!71;UBERON:0001049!3.73e-19!52;UBERON:0005068!3.73e-19!52;UBERON:0006241!3.73e-19!52;UBERON:0007135!3.73e-19!52;UBERON:0000033!4.13e-17!63;UBERON:0003056!4.71e-17!49;UBERON:0002020!1.35e-16!34;UBERON:0000955!6.98e-16!50;UBERON:0006238!6.98e-16!50;UBERON:0003080!2.41e-15!40;UBERON:0002780!2.57e-15!39;UBERON:0001890!2.57e-15!39;UBERON:0006240!2.57e-15!39;UBERON:0002616!2.91e-15!49;UBERON:0002791!4.03e-13!29;UBERON:0003528!4.03e-13!29;UBERON:0001893!4.03e-13!29;UBERON:0000956!7.96e-10!21;UBERON:0001869!7.96e-10!21;UBERON:0000203!7.96e-10!21;UBERON:0000153!1.82e-09!94;UBERON:0007811!2.41e-08!86;UBERON:0000025!3.51e-08!114;UBERON:0002619!4.31e-08!17;UBERON:0004111!1.43e-07!122 | |ontology_enrichment_uberon=UBERON:0001017!4.39e-25!73;UBERON:0005743!4.39e-25!73;UBERON:0000073!6.45e-25!75;UBERON:0001016!6.45e-25!75;UBERON:0004121!1.61e-23!102;UBERON:0000924!1.61e-23!102;UBERON:0006601!1.61e-23!102;UBERON:0002346!3.13e-21!71;UBERON:0003075!3.13e-21!71;UBERON:0007284!3.13e-21!71;UBERON:0001049!3.73e-19!52;UBERON:0005068!3.73e-19!52;UBERON:0006241!3.73e-19!52;UBERON:0007135!3.73e-19!52;UBERON:0000033!4.13e-17!63;UBERON:0003056!4.71e-17!49;UBERON:0002020!1.35e-16!34;UBERON:0000955!6.98e-16!50;UBERON:0006238!6.98e-16!50;UBERON:0003080!2.41e-15!40;UBERON:0002780!2.57e-15!39;UBERON:0001890!2.57e-15!39;UBERON:0006240!2.57e-15!39;UBERON:0002616!2.91e-15!49;UBERON:0002791!4.03e-13!29;UBERON:0003528!4.03e-13!29;UBERON:0001893!4.03e-13!29;UBERON:0000956!7.96e-10!21;UBERON:0001869!7.96e-10!21;UBERON:0000203!7.96e-10!21;UBERON:0000153!1.82e-09!94;UBERON:0007811!2.41e-08!86;UBERON:0000025!3.51e-08!114;UBERON:0002619!4.31e-08!17;UBERON:0004111!1.43e-07!122 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.21e-25,73;UBERON:0001016,3.27e-25,75;UBERON:0004121,1.88e-23,95;UBERON:0000924,1.88e-23,95;UBERON:0006601,1.88e-23,95;UBERON:0002346,7.37e-22,64;UBERON:0003075,7.37e-22,64;UBERON:0007284,7.37e-22,64;UBERON:0010314,1.68e-21,92;UBERON:0010371,1.17e-20,73;UBERON:0001049,2.24e-19,52;UBERON:0005068,2.24e-19,52;UBERON:0006241,2.24e-19,52;UBERON:0007135,2.24e-19,52;UBERON:0000073,7.10e-19,54;UBERON:0003056,4.58e-17,49;UBERON:0002020,8.74e-17,34;UBERON:0000955,1.38e-16,47;UBERON:0006238,1.38e-16,47;UBERON:0002616,6.03e-16,46;UBERON:0003080,1.62e-15,40;UBERON:0002780,1.72e-15,39;UBERON:0001890,1.72e-15,39;UBERON:0006240,1.72e-15,39;UBERON:0003528,2.88e-13,29;UBERON:0002791,2.88e-13,29;UBERON:0001893,2.88e-13,29;UBERON:0000956,6.26e-10,21;UBERON:0001869,6.26e-10,21;UBERON:0000203,6.26e-10,21;UBERON:0002619,3.56e-08,17;UBERON:0000025,3.65e-08,114;UBERON:0004111,1.66e-07,122 | |||
|phase1_expression=9.76907967339243,0,0.454999239389536,0,0.500895729946347,0.33575854382378,0,0.516493293766305,0,0,0.34243593645101,0.0797721589953364,0.513602189793617,0.174840804837995,0.666219523631325,0.202475267389826,0,0.157731082679119,0.274228867211478,0.42438965179803,2.89147186513637,1.78723712161594,0.783599367416806,0,0.68822784320151,0.57423196411502,0.430761996159075,0.861884930743556,0.570070258369122,0.252030129759931,0.443461021310609,0,0,0,0.288851619751275,0.664938581433969,1.02084678131185,0,0,0.523523743973798,0,0,0,3.9028013572429,3.24406179902447,3.67093504323363,15.6478268869608,5.66865406589161,8.34807494390993,7.38833616482277,4.05960622713551,11.5002051491977,0.671130424230945,0.725362142011344,0,6.17422646486273,6.01720223871389,5.67239301505187,10.1158230429799,19.0436752537932,9.50747105259269,9.4876468979357,6.22506357277798,3.1496490104849,0,0.7104801149461,7.49000276296012,10.373894243682,8.08778976006126,10.2604513132085,8.62332341540666,23.9946826899195,24.7372765865807,7.59442955132715,9.77623804386011,11.9498442259303,1.10115880999389,6.89511625660014,4.76180253094355,14.1118327871307,15.186948838,13.022834263919,6.14202597803038,6.19038871034848,7.18151764551008,19.7401152267357,16.5151149726959,15.8439528951505,3.7863096666592,5.51672388779534,3.76823835312181,1.72084775396277,0.679971333707751,1.61910957491345,0,0,0.842666520790511,1.70430322578058,4.1565760736459,2.82671659608272,6.05626705039726,1.28326477414318,0,0,1.94841936910093,2.02687892380079,1.01104889002957,0.79928715803342,0.258937883647172,2.67195850316685,5.37804512975021,6.08930956624282,4.61230994512117,4.52167921657868,5.76184664964954,3.39299796590124,0.741584903203122,2.74738778147832,0.884610551949874,3.07357014900077,3.09178125844551,1.45462575940567,0,4.39171195517321,6.70229461803056,0.255457055208591,1.91704199209472,1.19980546198682,2.1601938602421,5.54225365797844,6.40500843946077,17.8429180000267,8.16974304903699,5.62574006126727,3.1168206683934,6.65189178577806,11.4060087512354,2.23932547098167,4.54900965180614,0.841767423545896,8.45782879257574,8.5063778640385,7.02242306240862,8.28876498096433,10.0694018743965,5.50888997224854,7.49613796477831,4.9153640440413,4.95806383745537,6.80781888604149,7.5658983390498,9.86380795924087,10.2877482213471,4.179025998266,6.37924622864625,5.7719937377363,0,1.28673953557358,0.852490498186778,3.93538967817454,7.27030785941398,4.50155153652537,5.91861838963026,5.90292695242211,5.39934895105824,4.41814495025775,5.09719462659276,5.95503246072564,3.78487654801005,4.92502392237286,3.4859588104718,4.09359964790931,1.53685080703735,3.08674763148855,4.83666881697493,10.5991750750663,0,0,5.33220626338085,5.34144345279009,3.8660238396628,2.62188582010345,2.89091456998331,1.33157938278791,0,2.30578536613615,1.25667604400135,1.1937388322469,2.53453313254856,0,0.648414149624083,0.597423819763102,3.03468641524931,5.48392860526698,3.38123207019241,2.24016460629846,5.04276466635827,4.20814919341911,2.84564417059158,1.47610147979602,2.35498091762062,0.740382983530803,0,2.16898637430922,1.96558995113203,1.12431056192427,0.811440485554012,0.241177159752417,1.78238096246994,1.15078454980324,0.810676133875177,0.274561413188081,1.43768206527355,1.48856379067401,0.936113019343682,1.26289438973556,0.358794827043824,0.482443521363367,2.77129785249907,4.9267767060326,6.35563408123901,6.28056817368196,5.63256595892405,3.68513766371995,5.71304738126433,5.46374214001837,4.09851374676097,4.20782910332672,5.42146213435456,3.4411296090305,1.38147985492716,3.03763023021174,0,0.54390568381871,2.45882136509518,1.65562047782839,4.33486592967038,4.45404409050372,3.27869890753351,2.52470927204373,4.73262329124385,6.63745865304285,9.26320610251035,5.01834475700359,8.68914828921337,6.22768367735431,5.66734982344852,6.72188473196017,5.13874111330481,12.8528526568723,4.11626247103979,7.30068975035746,10.2618784392753,5.27904393512113,0,3.8844901784797,3.62788268357701,2.07465587731488,3.83892460745005,2.45948118355142,3.6179961043551,2.18120237686503,2.85197902707777,1.8962205476149,0,1.03135543248187,5.44703369206061,8.10274923140896,5.6917820864412,8.57348140126369,7.44828981297549,8.91844088010353,6.91105886528908,8.22055362609418,0.469343416127421,1.0591603543191,1.54369878638473,1.31909002353184,8.23468576149118,4.644095219468,4.17803204010978,2.46211349617592,0.582961673259701,5.00648315428376,0.341741761595705,2.47664241555867,2.40752885580625,0.753473828018764,0.546776910884101,1.60144721244566,3.56954702987096,2.6590775941495,4.00779924032829,0.954670618015114,4.11236791655476,4.67634774391752,6.15630442684267,4.18176592028937,4.36725127492355,3.9110660451598,4.62859352061881,2.6175594198403,0.518459893167171,0.621339313086926,0,4.48549638131936,4.46737924234164,7.38914515707381,7.36210993823067,6.58928889414035,9.03650737572305,4.4269490846943,3.56521771047417,0.966336483304024,0.864090018773596,0.948033361884535,2.8381530140623,2.87590680061516,1.68897069871134,3.04345382634718,2.78153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| ||
|short_description=p1@ENSMUST00000133630 | |short_description=p1@ENSMUST00000133630 | ||
}} | }} |
Latest revision as of 14:59, 4 August 2015
Short description: | p1@ENSMUST00000133630 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENSMUST00000133630_5end |
Coexpression cluster: | MCL_coexpression_mm9:398 |
Association with transcript: | 0bp_to_ENSMUST00000133630_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 2.95e-15 | 44 |
neurectodermal cell | 2.95e-15 | 44 |
neural cell | 4.23e-15 | 43 |
neuron | 1.47e-12 | 33 |
neuronal stem cell | 1.47e-12 | 33 |
neuroblast | 1.47e-12 | 33 |
electrically signaling cell | 1.47e-12 | 33 |
electrically responsive cell | 4.99e-12 | 39 |
electrically active cell | 4.99e-12 | 39 |
CNS neuron (sensu Vertebrata) | 8.68e-11 | 23 |
neuroblast (sensu Vertebrata) | 8.68e-11 | 23 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 2.21e-25 | 73 |
nervous system | 3.27e-25 | 75 |
ectoderm-derived structure | 1.88e-23 | 95 |
ectoderm | 1.88e-23 | 95 |
presumptive ectoderm | 1.88e-23 | 95 |
neurectoderm | 7.37e-22 | 64 |
neural plate | 7.37e-22 | 64 |
presumptive neural plate | 7.37e-22 | 64 |
structure with developmental contribution from neural crest | 1.68e-21 | 92 |
ecto-epithelium | 1.17e-20 | 73 |
neural tube | 2.24e-19 | 52 |
neural rod | 2.24e-19 | 52 |
future spinal cord | 2.24e-19 | 52 |
neural keel | 2.24e-19 | 52 |
regional part of nervous system | 7.10e-19 | 54 |
pre-chordal neural plate | 4.58e-17 | 49 |
gray matter | 8.74e-17 | 34 |
brain | 1.38e-16 | 47 |
future brain | 1.38e-16 | 47 |
regional part of brain | 6.03e-16 | 46 |
anterior neural tube | 1.62e-15 | 40 |
regional part of forebrain | 1.72e-15 | 39 |
forebrain | 1.72e-15 | 39 |
future forebrain | 1.72e-15 | 39 |
brain grey matter | 2.88e-13 | 29 |
regional part of telencephalon | 2.88e-13 | 29 |
telencephalon | 2.88e-13 | 29 |
cerebral cortex | 6.26e-10 | 21 |
cerebral hemisphere | 6.26e-10 | 21 |
pallium | 6.26e-10 | 21 |
regional part of cerebral cortex | 3.56e-08 | 17 |
tube | 3.65e-08 | 114 |
anatomical conduit | 1.66e-07 | 122 |