FFCP PHASE1:Mm9::chr12:105433069..105433075,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr12:105433069..105433075,-
|short_description=p@chr12:105433069..105433075,-
|description=CAGE_peak_at_chr12:105433069..105433075,-
|association_with_transcri...") |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=342 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr12:105433069..105433075,- | |||
|description=CAGE_peak_at_chr12:105433069..105433075,- | |||
|id=chr12:105433069..105433075,- | |||
|ontology_enrichment_celltype=CL:0000222!4.53e-20!7;CL:0000680!1.26e-17!6;CL:0000183!1.26e-17!6;CL:0000187!1.26e-17!6;CL:0000056!1.26e-17!6;CL:0000355!1.76e-11!9;CL:0000192!1.14e-09!3;CL:0000359!1.14e-09!3;CL:0002539!1.14e-09!3;CL:0000514!1.14e-09!3;CL:0002494!1.38e-09!3;CL:0000737!1.38e-09!3;CL:0000746!1.38e-09!3;CL:0000513!1.38e-09!3;CL:0000215!3.99e-09!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000680,1.01e-74,6;CL:0000187,1.01e-74,6;CL:0000056,1.01e-74,6;CL:0000222,3.86e-64,7;CL:0000355,5.11e-50,9;CL:0000192,2.79e-38,3;CL:0000359,2.79e-38,3;CL:0002539,2.79e-38,3;CL:0000514,2.79e-38,3;CL:0002494,6.64e-38,3;CL:0000737,6.64e-38,3;CL:0000746,6.64e-38,3;CL:0000513,6.64e-38,3;CL:0000393,8.16e-12,39;CL:0000211,8.16e-12,39;CL:0002321,6.38e-09,70;CL:0000217,2.35e-07,2;CL:0000328,2.35e-07,2;CL:0002573,2.35e-07,2;CL:0002376,2.35e-07,2;CL:0000218,2.35e-07,2;CL:0000692,2.35e-07,2;CL:0002377,2.35e-07,2;CL:0002375,2.35e-07,2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001134!1.76e-11!9;UBERON:0002036!1.76e-11!9;UBERON:0002385!1.76e-11!9;UBERON:0000486!1.76e-11!9;UBERON:0001015!1.76e-11!9;UBERON:0004290!1.76e-11!9;UBERON:0003082!1.76e-11!9;UBERON:0000383!2.99e-10!10;UBERON:0001135!1.14e-09!3;UBERON:0004237!1.14e-09!3;UBERON:0004695!1.14e-09!3;UBERON:0002111!1.14e-09!3;UBERON:0004178!1.14e-09!3;UBERON:0000055!1.14e-09!5;UBERON:0001981!1.14e-09!5;UBERON:0002049!1.14e-09!5;UBERON:0007500!1.14e-09!5;UBERON:0007798!1.14e-09!5;UBERON:0004537!1.14e-09!5;UBERON:0006965!1.14e-09!5;UBERON:0002329!3.03e-09!11;UBERON:0003077!3.03e-09!11;UBERON:0003059!3.03e-09!11;UBERON:0007282!3.03e-09!11;UBERON:0009618!3.03e-09!11;UBERON:0007285!3.03e-09!11;UBERON:0000914!1.70e-07!17;UBERON:0000947!2.52e-07!4;UBERON:0001637!2.52e-07!4;UBERON:0003509!2.52e-07!4;UBERON:0004573!2.52e-07!4;UBERON:0004571!2.52e-07!4;UBERON:0010191!2.52e-07!4;UBERON:0004572!2.52e-07!4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,5.11e-50,9;UBERON:0002036,5.11e-50,9;UBERON:0002385,5.11e-50,9;UBERON:0000486,5.11e-50,9;UBERON:0007503,5.11e-50,9;UBERON:0001015,5.11e-50,9;UBERON:0002329,5.11e-50,9;UBERON:0003082,5.11e-50,9;UBERON:0003059,5.11e-50,9;UBERON:0007282,5.11e-50,9;UBERON:0004290,5.11e-50,9;UBERON:0009618,5.11e-50,9;UBERON:0000383,4.52e-45,10;UBERON:0007524,5.06e-41,11;UBERON:0003077,5.06e-41,11;UBERON:0007285,5.06e-41,11;UBERON:0001135,2.79e-38,3;UBERON:0004237,2.79e-38,3;UBERON:0004695,2.79e-38,3;UBERON:0002111,2.79e-38,3;UBERON:0004178,2.79e-38,3;UBERON:0000947,6.00e-29,4;UBERON:0001637,6.00e-29,4;UBERON:0004573,6.00e-29,4;UBERON:0003509,6.00e-29,4;UBERON:0004571,6.00e-29,4;UBERON:0010191,6.00e-29,4;UBERON:0004572,6.00e-29,4;UBERON:0000055,2.45e-23,5;UBERON:0007500,2.45e-23,5;UBERON:0001981,2.45e-23,5;UBERON:0002049,2.45e-23,5;UBERON:0007798,2.45e-23,5;UBERON:0004537,2.45e-23,5;UBERON:0006965,2.45e-23,5;UBERON:0004535,7.69e-20,23;UBERON:0001009,7.69e-20,23;UBERON:0002204,2.40e-14,32;UBERON:0004872,6.41e-14,33;UBERON:0005256,2.89e-10,45;UBERON:0003914,7.77e-10,47;UBERON:0003104,1.31e-07,61;UBERON:0009142,1.31e-07,61;UBERON:0000490,4.87e-07,66;UBERON:0007100,6.25e-07,18;UBERON:0000948,6.25e-07,18;UBERON:0005498,6.25e-07,18;UBERON:0004140,6.25e-07,18;UBERON:0009881,6.25e-07,18;UBERON:0004141,6.25e-07,18;UBERON:0003084,6.25e-07,18;UBERON:0007005,6.25e-07,18;UBERON:0004139,6.25e-07,18;UBERON:0004291,6.25e-07,18 | |||
|phase1_expression=0,0,0.454999239389536,0,0,0,0,0.129123323441576,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0.159992422793407,0,0,0,0.215471232685889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.65100772129174,3.75094645512204,3.85448179539531,0,0,0,0,0.139986421625363,0,0,0,0,3.60163210450326,3.15186783932632,16.5015069528782,0,0,0,0.677689064138264,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28734528666413,0.604572480854284,0.579728977403356,0,0,0,0,0,0.140444420131752,0,0.259786004602869,0,0,0,0,0,0,0,0,0.11418387971906,0.258937883647172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274561413188081,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.54390568381871,0,0,0,0,0.327869890753351,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.119372344003136,0.492422699235184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129920822977795,0,0,0.120195449519969,0,0,0.0762068066549998,0,0.0974578807397524,0.192423683280659,0,0.453460767230423,0,0.0897138566094757,0.167884616364078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0.454999239389536,0,0,0,0,0.129123323441576,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0.159992422793407,0,0,0,0.215471232685889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.65100772129174,3.75094645512204,3.85448179539531,0,0,0,0,0.139986421625363,0,0,0,0,3.60163210450326,3.15186783932632,16.5015069528782,0,0,0,0.677689064138264,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28734528666413,0.604572480854284,0.579728977403356,0,0,0,0,0,0.140444420131752,0,0.259786004602869,0,0,0,0,0,0,0,0,0.11418387971906,0.258937883647172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274561413188081,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.54390568381871,0,0,0,0,0.327869890753351,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.119372344003136,0.492422699235184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129920822977795,0,0,0.120195449519969,0,0,0.0762068066549998,0,0.0974578807397524,0.192423683280659,0,0.453460767230423,0,0.0897138566094757,0.167884616364078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr12:105433069..105433075,- | |||
}} | }} |
Latest revision as of 15:23, 4 August 2015
Short description: | p@chr12:105433069..105433075, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:105433069..105433075, - |
Coexpression cluster: | MCL_coexpression_mm9:342 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 1.01e-74 | 6 |
muscle cell | 1.01e-74 | 6 |
myoblast | 1.01e-74 | 6 |
mesodermal cell | 3.86e-64 | 7 |
multi-potent skeletal muscle stem cell | 5.11e-50 | 9 |
smooth muscle cell | 2.79e-38 | 3 |
vascular associated smooth muscle cell | 2.79e-38 | 3 |
aortic smooth muscle cell | 2.79e-38 | 3 |
smooth muscle myoblast | 2.79e-38 | 3 |
cardiocyte | 6.64e-38 | 3 |
striated muscle cell | 6.64e-38 | 3 |
cardiac muscle cell | 6.64e-38 | 3 |
cardiac muscle myoblast | 6.64e-38 | 3 |
electrically responsive cell | 8.16e-12 | 39 |
electrically active cell | 8.16e-12 | 39 |
embryonic cell | 6.38e-09 | 70 |
insulating cell | 2.35e-07 | 2 |
myelin accumulating cell | 2.35e-07 | 2 |
Schwann cell | 2.35e-07 | 2 |
non-myelinating Schwann cell | 2.35e-07 | 2 |
myelinating Schwann cell;;Schwann cell | 2.35e-07 | 2 |
terminal Schwann cell | 2.35e-07 | 2 |
immature Schwann cell | 2.35e-07 | 2 |
Schwann cell precursor | 2.35e-07 | 2 |