Personal tools

FFCP PHASE1:Mm9::chr12:112909479..112909498,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(5 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=NA
|EntrezGene=NA
|HGNC=
|HGNC=
|MCL_coexpression_id=2769
|TSSclassifier=NA
|UniProt=NA
|UniProt=NA
|association_with_transcript=NA
|association_with_transcript=NA
|cluster_id=chr12:112909479..112909498,-
|description=CAGE_peak_at_chr12:112909479..112909498,-
|description=CAGE_peak_at_chr12:112909479..112909498,-
|id=chr12:112909479..112909498,-
|id=chr12:112909479..112909498,-
|ontology_enrichment_celltype=CL:0002319!6.08e-18!43;CL:0000221!2.09e-17!44;CL:0000133!2.09e-17!44;CL:0000055!5.28e-16!50;CL:0000540!3.54e-13!33;CL:0000047!3.54e-13!33;CL:0000031!3.54e-13!33;CL:0000404!3.54e-13!33;CL:0000393!3.48e-12!39;CL:0000211!3.48e-12!39;CL:0000117!2.49e-09!23;CL:0000337!2.49e-09!23;CL:0002321!2.03e-07!70;CL:0000220!2.03e-07!70;CL:0002453!6.21e-07!8
|ontology_enrichment_celltype_v019_2=CL:0002319,3.12e-23,43;CL:0000221,2.08e-22,44;CL:0000133,2.08e-22,44;CL:0000540,1.27e-16,33;CL:0000047,1.27e-16,33;CL:0000031,1.27e-16,33;CL:0000404,1.27e-16,33;CL:0000393,8.14e-15,39;CL:0000211,8.14e-15,39;CL:0002321,4.53e-11,70;CL:0000117,3.16e-10,23;CL:0000337,3.16e-10,23;CL:0002453,4.87e-10,8;CL:0000107,6.64e-09,9;CL:0000128,9.18e-08,6;CL:0000126,9.18e-08,6;CL:0000127,9.18e-08,6;CL:0000333,1.64e-07,10;CL:0000095,1.64e-07,10;CL:0000243,1.64e-07,10;CL:0000123,1.64e-07,10;CL:0000125,1.64e-07,10;CL:0000030,1.64e-07,10;CL:0000339,1.64e-07,10
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!8.08e-24!73;UBERON:0005743!8.08e-24!73;UBERON:0000073!2.70e-23!75;UBERON:0001016!2.70e-23!75;UBERON:0004121!8.96e-20!102;UBERON:0000924!8.96e-20!102;UBERON:0006601!8.96e-20!102;UBERON:0002346!5.63e-17!71;UBERON:0003075!5.63e-17!71;UBERON:0007284!5.63e-17!71;UBERON:0000033!6.04e-14!63;UBERON:0001049!8.44e-14!52;UBERON:0005068!8.44e-14!52;UBERON:0006241!8.44e-14!52;UBERON:0007135!8.44e-14!52;UBERON:0000955!3.55e-13!50;UBERON:0006238!3.55e-13!50;UBERON:0002616!1.14e-12!49;UBERON:0003056!4.00e-11!49;UBERON:0002020!2.48e-10!34;UBERON:0003080!1.32e-08!40;UBERON:0002780!2.17e-08!39;UBERON:0001890!2.17e-08!39;UBERON:0006240!2.17e-08!39;UBERON:0002791!3.43e-08!29;UBERON:0003528!3.43e-08!29;UBERON:0001893!3.43e-08!29
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.36e-26,73;UBERON:0001016,2.12e-25,75;UBERON:0004121,8.86e-25,95;UBERON:0000924,8.86e-25,95;UBERON:0006601,8.86e-25,95;UBERON:0002346,9.59e-20,64;UBERON:0003075,9.59e-20,64;UBERON:0007284,9.59e-20,64;UBERON:0010371,1.67e-15,73;UBERON:0000073,1.88e-14,54;UBERON:0001049,6.27e-13,52;UBERON:0005068,6.27e-13,52;UBERON:0006241,6.27e-13,52;UBERON:0007135,6.27e-13,52;UBERON:0000955,7.75e-11,47;UBERON:0006238,7.75e-11,47;UBERON:0010314,8.72e-11,92;UBERON:0003056,1.34e-10,49;UBERON:0002616,3.39e-10,46;UBERON:0002020,5.44e-10,34;UBERON:0002410,6.64e-09,9;UBERON:0003076,1.90e-08,12;UBERON:0003057,1.90e-08,12;UBERON:0011216,7.26e-08,194;UBERON:0003528,8.39e-08,29;UBERON:0002791,8.39e-08,29;UBERON:0001893,8.39e-08,29;UBERON:0003080,7.11e-07,40;UBERON:0000010,8.14e-07,11
|phase1_expression=0,0,0,0.30246421130683,0,0.16787927191189,0.467225281191051,0,0,0.468129052643987,0,0,0,0.174840804837995,0,0,0,0,0.137114433605739,0,1.87095238332354,0,0,0.799962113967033,0.22940928106717,0,0,0.861884930743556,0,0,0,0,0,0,0.288851619751275,0,0.204169356262369,0,0,0,0,0,0,0.125896817975577,0,0.550640256485045,3.12956537739216,15.2617609466313,9.44650585758229,11.4713640453827,6.57936181639204,8.62515386189829,0,0,0,0.257259436035947,1.43266719969378,1.54701627683233,0.809265843438391,1.05798195854407,1.26766280701236,1.69422266034566,0,3.1496490104849,6.92206453796882,4.2628806896766,29.3608108308037,91.8281749718515,0.725827286159344,1.35005938331691,2.52389953621658,4.85606673486466,4.63823935998388,1.22490799214954,1.82106394934649,1.83843757322004,6.60695285996332,2.29837208553338,2.30409799884365,0.527545150920775,1.28082701043374,1.04182674111352,6.14202597803038,6.19038871034848,3.51435969886663,2.06240009831567,2.70506193518296,0.931997229126503,0.151452386666368,0.377857800533928,0,0,0,0,0,0,0.842666520790511,0,0,0,0.14084341977668,0,0,0,0,0.506719730950197,0,0.91347103775248,0,0,0.346970653532272,0.304465478312141,0.691846491768175,0.150722640552623,0.23517741427141,0.628332956648377,0.247194967734374,0,0,0.970601099684455,0.441683036920787,2.42437626567611,0,1.17112318804619,62.4151186304096,3.0654846625031,0,0,0,1.04853447583376,1.37250180845588,1.00523481690292,1.21677024134594,1.53429274398198,0.83115217823824,0.486723789203273,0.203678727700633,0.995255764880744,0.252722758433675,0,3.3831315170303,2.5289231487682,1.62055916824814,1.05493372485001,2.78949646520444,2.8185018462667,2.90475346135159,1.29351685369508,0,0,0.703804496655795,0.657587197282725,0,0,0.205782136407943,0.199034266818493,0,0,0,0.207125772535502,0,0,0.23674473558521,0.393528463494808,0,0,0.804820204198858,0.116765342367169,0,0,0.324275238183423,0.292399974850665,0.439100230582101,0.268412837520744,0.841159794256509,0.92614151141356,2.97376904685418,1.32225283331772,0.639864751605702,0,0.38660238396628,0.605050573870028,0.22237804384487,0.380451252225118,7.59246498471219,1.97638745668813,1.50801125280162,2.18852119245266,1.16978452271472,7.19055526923377,2.80979464837102,2.38969527905241,0.189667900953082,0,0,0,0,0.280543279561274,0.0632365371242573,0.442830443938806,0.470996183524124,1.60416313098341,0,0,0,0,0.202860121388503,0,0.50925170356284,0,0.810676133875177,0.549122826376163,0,0,0,0.252578877947112,0,0,0.369506380333209,0.189491411770485,0.162964976442026,0,0,0,0,0,0.157635144106191,0.44292937929755,0.637819074629948,0.163863314715738,0.172684981865896,0.578596234326046,3.01582567878545,3.26343410291226,0,0.275936746304732,1.28440471990234,2.10981035865966,0,0,4.41711507182759,5.46614242015294,2.80050417052639,3.82350076724083,2.22798674082394,1.98153571552183,6.47697122679831,6.72188473196017,1.97643888973262,2.89189184779626,0.709700426041343,0,0.651547837414304,1.31976098378028,0,0,0.302323556964751,0,0.590603785761546,0,0.775284879504663,0.363533729477506,0.712994756769443,0.948110273807448,0,0,0,1.98067203434441,1.81102157295856,0.857348140126369,0,0.535106452806212,0.822745103010605,2.13125464380219,1.17335854031855,0.63549621259146,0.882113592219848,0,0,0.120625849856312,0,0,8.74442509889552,1.66882771809459,0.170870880797853,0.619160603889667,0,0,0,0.228778173206523,0,0,0,3.81868247206045,0.316335993581135,0,0.86404272657441,0.627264888043406,0.218362563746178,0.674321731924103,1.40510874733071,2.6175594198403,1.55537967950151,0,0,0.448549638131936,0.330916980914195,0,0.387479470433193,0.168956125490778,0.234714477291508,0,0.104859344425711,0,0,0,0.202725215290164,0,0,0,0.39736270956253,0.120195449519969,0,0.100966449948148,0.0762068066549998,0.100826185136841,0.0974578807397524,0.288635524920988,0.350630706544707,0.226730383615211,1.33191572024439,3.22969883794113,1.17519231454855,1.73870634628971,0.750729901804728,1.64836461840539,0.857473516316263,0.501572104035363,1.12950368523413,0,1.14579102687879,1.03111909406213,1.37016503954128,0.755393897389701,2.70009000092722,0.45032120322422,0.453142408984205,1.55328093525546,0.518936737920883,1.59609949360412,1.02440163452481,0,0.209613162627982,0.183843508450014,0.222246727801615,0,0.320919209591815,0,0,0.754505365544305,0.280924522409647,0.256100609619477,0.229741875822453,0,0.463537303779422,0.192909220463705,0,0,0.342869252385415,0.177475806159338,0,0,0.376437521661322,0.0846146078916765,0,0.526139422875686,0.407412341537585,0,0,0,0,0.154936841185966,0.192906610981141,0.999242311751784,0.233931608445408,1.07435527024149,2.67803664896381,0.220591419119515,0.695603506861264
|phase1_expression=0,0,0,0.30246421130683,0,0.16787927191189,0.467225281191051,0,0,0.468129052643987,0,0,0,0.174840804837995,0,0,0,0,0.137114433605739,0,1.87095238332354,0,0,0.799962113967033,0.22940928106717,0,0,0.861884930743556,0,0,0,0,0,0,0.288851619751275,0,0.204169356262369,0,0,0,0,0,0,0.125896817975577,0,0.550640256485045,3.12956537739216,15.2617609466313,9.44650585758229,11.4713640453827,6.57936181639204,8.62515386189829,0,0,0,0.257259436035947,1.43266719969378,1.54701627683233,0.809265843438391,1.05798195854407,1.26766280701236,1.69422266034566,0,3.1496490104849,6.92206453796882,4.2628806896766,29.3608108308037,91.8281749718515,0.725827286159344,1.35005938331691,2.52389953621658,4.85606673486466,4.63823935998388,1.22490799214954,1.82106394934649,1.83843757322004,6.60695285996332,2.29837208553338,2.30409799884365,0.527545150920775,1.28082701043374,1.04182674111352,6.14202597803038,6.19038871034848,3.51435969886663,2.06240009831567,2.70506193518296,0.931997229126503,0.151452386666368,0.377857800533928,0,0,0,0,0,0,0.842666520790511,0,0,0,0.14084341977668,0,0,0,0,0.506719730950197,0,0.91347103775248,0,0,0.346970653532272,0.304465478312141,0.691846491768175,0.150722640552623,0.23517741427141,0.628332956648377,0.247194967734374,0,0,0.970601099684455,0.441683036920787,2.42437626567611,0,1.17112318804619,62.4151186304096,3.0654846625031,0,0,0,1.04853447583376,1.37250180845588,1.00523481690292,1.21677024134594,1.53429274398198,0.83115217823824,0.486723789203273,0.203678727700633,0.995255764880744,0.252722758433675,0,3.3831315170303,2.5289231487682,1.62055916824814,1.05493372485001,2.78949646520444,2.8185018462667,2.90475346135159,1.29351685369508,0,0,0.703804496655795,0.657587197282725,0,0,0.205782136407943,0.199034266818493,0,0,0,0.207125772535502,0,0,0.23674473558521,0.393528463494808,0,0,0.804820204198858,0.116765342367169,0,0,0.324275238183423,0.292399974850665,0.439100230582101,0.268412837520744,0.841159794256509,0.92614151141356,2.97376904685418,1.32225283331772,0.639864751605702,0,0.38660238396628,0.605050573870028,0.22237804384487,0.380451252225118,7.59246498471219,1.97638745668813,1.50801125280162,2.18852119245266,1.16978452271472,7.19055526923377,2.80979464837102,2.38969527905241,0.189667900953082,0,0,0,0,0.280543279561274,0.0632365371242573,0.442830443938806,0.470996183524124,1.60416313098341,0,0,0,0,0.202860121388503,0,0.50925170356284,0,0.810676133875177,0.549122826376163,0,0,0,0.252578877947112,0,0,0.369506380333209,0.189491411770485,0.162964976442026,0,0,0,0,0,0.157635144106191,0.44292937929755,0.637819074629948,0.163863314715738,0.172684981865896,0.578596234326046,3.01582567878545,3.26343410291226,0,0.275936746304732,1.28440471990234,2.10981035865966,0,0,4.41711507182759,5.46614242015294,2.80050417052639,3.82350076724083,2.22798674082394,1.98153571552183,6.47697122679831,6.72188473196017,1.97643888973262,2.89189184779626,0.709700426041343,0,0.651547837414304,1.31976098378028,0,0,0.302323556964751,0,0.590603785761546,0,0.775284879504663,0.363533729477506,0.712994756769443,0.948110273807448,0,0,0,1.98067203434441,1.81102157295856,0.857348140126369,0,0.535106452806212,0.822745103010605,2.13125464380219,1.17335854031855,0.63549621259146,0.882113592219848,0,0,0.120625849856312,0,0,8.74442509889552,1.66882771809459,0.170870880797853,0.619160603889667,0,0,0,0.228778173206523,0,0,0,3.81868247206045,0.316335993581135,0,0.86404272657441,0.627264888043406,0.218362563746178,0.674321731924103,1.40510874733071,2.6175594198403,1.55537967950151,0,0,0.448549638131936,0.330916980914195,0,0.387479470433193,0.168956125490778,0.234714477291508,0,0.104859344425711,0,0,0,0.202725215290164,0,0,0,0.39736270956253,0.120195449519969,0,0.100966449948148,0.0762068066549998,0.100826185136841,0.0974578807397524,0.288635524920988,0.350630706544707,0.226730383615211,1.33191572024439,3.22969883794113,1.17519231454855,1.73870634628971,0.750729901804728,1.64836461840539,0.857473516316263,0.501572104035363,1.12950368523413,0,1.14579102687879,1.03111909406213,1.37016503954128,0.755393897389701,2.70009000092722,0.45032120322422,0.453142408984205,1.55328093525546,0.518936737920883,1.59609949360412,1.02440163452481,0,0.209613162627982,0.183843508450014,0.222246727801615,0,0.320919209591815,0,0,0.754505365544305,0.280924522409647,0.256100609619477,0.229741875822453,0,0.463537303779422,0.192909220463705,0,0,0.342869252385415,0.177475806159338,0,0,0.376437521661322,0.0846146078916765,0,0.526139422875686,0.407412341537585,0,0,0,0,0.154936841185966,0.192906610981141,0.999242311751784,0.233931608445408,1.07435527024149,2.67803664896381,0.220591419119515,0.695603506861264
|short_description=p@chr12:112909479..112909498,-
|short_description=p@chr12:112909479..112909498,-
}}
}}

Latest revision as of 18:33, 4 August 2015

Short description:p@chr12:112909479..112909498, -
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_at_chr12:112909479..112909498, -
Coexpression cluster:MCL_coexpression_mm9:2769
Association with transcript: NA
EntrezGene:NA
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p@chr12:112909479..112909498-

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.30
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.47
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.47
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.17
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.87
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.80
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.86
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.55
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B73.13
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C215.26
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B89.45
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C311.47
Mouse Astrocytes, donor2.CNhs12078.11552-120C46.58
Mouse Astrocytes, donor3.CNhs12107.11633-122C48.63
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E11.43
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.55
Mouse Granule cells, donor1.CNhs12131.11713-123C30.81
Mouse Granule cells, donor2.CNhs12357.11731-123E31.06
Mouse Granule cells, donor3.CNhs12108.11636-122C71.27
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.69
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C73.15
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E76.92
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D24.26
Mouse Microglia, donor1.CNhs12629.11718-123C829.36
Mouse Microglia, donor2.CNhs12634.11736-123E891.83
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.73
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.35
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.52
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F14.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D54.64
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.22
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.82
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D36.61
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.30
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.30
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.53
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.28
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.04
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E46.14
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E56.19
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.51
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.06
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.71
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.93
Mouse Schwann, donor1.CNhs12507.11728-123D90.15
Mouse Schwann, donor2.CNhs12573.11746-123F90.38
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.84
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.51
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.91
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.69
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.24
adrenal gland, neonate N25.CNhs11223.1377-27I30.63
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.97
bone (os femoris), neonate N16.CNhs11225.1525-43A60.44
bone (os femoris), neonate N20.CNhs11195.1350-25C32.42
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B21.17
cerebellum, neonate N30.CNhs11135.1395-42I262.42
colon, adult.CNhs10468.36-18H73.07
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A41.05
corpus striatum, adult.CNhs10487.19-21D81.37
corpus striatum, neonate N00.CNhs11226.630-43F11.01
cortex, adult.CNhs10473.12-14D51.22
cortex, neonate N30.CNhs11107.1392-42F21.53
diencephalon, adult.CNhs10482.20-12F20.83
diencephalon, neonate N30.CNhs11201.1388-42B20.49
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.20
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.00
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C63.38
eyeball, embryo E14.CNhs10521.399-16E22.53
eyeball, embryo E15.CNhs10593.426-16C91.62
eyeball, embryo E17.CNhs11023.1261-18D41.05
eyeball, neonate N00.CNhs11207.633-15C62.79
eyeball, neonate N01.CNhs11140.1532-43E72.82
eyeball, neonate N02.CNhs11205.1551-44G82.90
eyeball, neonate N16.CNhs11188.777-19A21.29
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.70
forelimb, embryo E14.CNhs10577.413-26A80.66
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.80
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.32
heart, neonate N20.CNhs11127.821-26I60.29
heart, neonate N25.CNhs11196.1351-25D30.44
heart, neonate N30.CNhs11202.1390-42D20.27
hippocampus, adult.CNhs10478.13-16E80.84
hippocampus, neonate N00.CNhs11228.627-43G10.93
intestinal mucosa, adult.CNhs10506.860-29I32.97
intestine, adult.CNhs10496.178-9A31.32
intestine, embryo E12.CNhs11019.1251-16I50.64
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.39
intestine, embryo E16.CNhs10585.463-22H40.61
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D17.59
intestine, neonate N01.CNhs11192.1322-23E91.98
intestine, neonate N06.CNhs11102.688-20B81.51
intestine, neonate N07.CNhs11095.720-20F22.19
intestine, neonate N10.CNhs11098.755-23A51.17
intestine, neonate N20.CNhs11187.827-18D17.19
intestine, neonate N25.CNhs11121.1352-25E32.81
intestine, neonate N30.CNhs11131.1384-42G12.39
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.28
kidney, neonate N10.CNhs11206.758-6D50.06
kidney, neonate N20.CNhs11113.832-19I10.44
kidney, neonate N25.CNhs11122.1353-25F30.47
kidney, neonate N30.CNhs11203.1385-42H11.60
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.51
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.81
liver, neonate N03.CNhs11123.1345-25G20.55
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.37
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E60.64
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.58
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A13.02
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A13.26
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C21.28
medulla oblongata, neonate N30.CNhs11200.1396-42A32.11
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E14.42
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E25.47
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E32.80
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D73.82
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D82.23
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.98
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D46.48
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D56.72
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.98
olfactory brain, adult.CNhs10489.18-22I92.89
ovary, adult.CNhs10507.91-2I70.71
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.65
oviduct, adult pregnant day01.CNhs10500.988-6G61.32
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.78
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B60.95
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E61.98
pituitary gland, embryo E13.CNhs11009.370-44C71.81
pituitary gland, embryo E14.CNhs11037.398-44A50.86
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.54
pituitary gland, embryo E17.CNhs11039.1265-44F50.82
pituitary gland, neonate N00.CNhs11190.1308-22E92.13
placenta, adult pregnant day10.CNhs10472.539-13I71.17
placenta, adult pregnant day17.CNhs10464.577-18G30.64
prostate, adult.CNhs10470.859-1F80.88
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.12
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I18.74
spinal cord, adult.CNhs10505.24-13C91.67
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C10.62
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H63.82
stomach, embryo E12.CNhs10588.356-43E30.32
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.86
stomach, embryo E17.CNhs11006.1035-18D50.63
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.67
stomach, neonate N07.CNhs11210.718-18A91.41
stomach, neonate N25.CNhs11104.1355-25E42.62
stomach, neonate N30.CNhs11134.1386-42I11.56
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.45
testis, embryo E15.CNhs11034.443-27C50.33
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.39
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.23
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.40
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.29
thymus, neonate N30.CNhs11132.1393-42G20.35
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H31.33
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F73.23
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G51.18
urinary bladder, adult.CNhs10481.879-12E41.74
uterus, adult pregnant day19.CNhs10497.590-15F50.75
uterus, adult.CNhs10509.92-27E51.65
vagina, adult.CNhs10502.89-27D50.86
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.13
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.15
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.03
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A41.37
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.70
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.55
whole body, embryo E11.CNhs11014.324-5I80.52
whole body, embryo E12.CNhs10587.857-27C91.60
whole body, embryo E13.CNhs10512.372-23H21.02
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.23
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.46
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.08
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.15
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I51.00
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C21.07
whole body, neonate N01.CNhs10576.659-23C62.68
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.70





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
central nervous system1.36e-2673
nervous system2.12e-2575
ectoderm-derived structure8.86e-2595
ectoderm8.86e-2595
presumptive ectoderm8.86e-2595
neurectoderm9.59e-2064
neural plate9.59e-2064
presumptive neural plate9.59e-2064
ecto-epithelium1.67e-1573
regional part of nervous system1.88e-1454
neural tube6.27e-1352
neural rod6.27e-1352
future spinal cord6.27e-1352
neural keel6.27e-1352
brain7.75e-1147
future brain7.75e-1147
structure with developmental contribution from neural crest8.72e-1192
pre-chordal neural plate1.34e-1049
regional part of brain3.39e-1046
gray matter5.44e-1034
autonomic nervous system6.64e-099
posterior neural tube1.90e-0812
chordal neural plate1.90e-0812
organ system subdivision7.26e-08194
brain grey matter8.39e-0829
regional part of telencephalon8.39e-0829
telencephalon8.39e-0829
anterior neural tube7.11e-0740
peripheral nervous system8.14e-0711
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr12:112909479..112909498,-&oldid=3809113"