FFCP PHASE1:Mm9::chr6:110890863..110890867,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=236 | |MCL_coexpression_id=236 | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:110890863..110890867,+ | |||
|description=CAGE_peak_at_chr6:110890863..110890867,+ | |description=CAGE_peak_at_chr6:110890863..110890867,+ | ||
|id=chr6:110890863..110890867,+ | |id=chr6:110890863..110890867,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!3.62e-17!71;UBERON:0003075!3.62e-17!71;UBERON:0007284!3.62e-17!71;UBERON:0003056!2.70e-16!49;UBERON:0000033!1.03e-15!63;UBERON:0001049!1.20e-15!52;UBERON:0005068!1.20e-15!52;UBERON:0006241!1.20e-15!52;UBERON:0007135!1.20e-15!52;UBERON:0000955!3.37e-13!50;UBERON:0006238!3.37e-13!50;UBERON:0002616!1.61e-12!49;UBERON:0003080!2.18e-12!40;UBERON:0002780!1.06e-11!39;UBERON:0001890!1.06e-11!39;UBERON:0006240!1.06e-11!39;UBERON:0002021!2.17e-10!10;UBERON:0000411!2.17e-10!10;UBERON:0001950!2.17e-10!10;UBERON:0004121!1.59e-09!102;UBERON:0000924!1.59e-09!102;UBERON:0006601!1.59e-09!102;UBERON:0002020!2.43e-09!34;UBERON:0000073!3.19e-09!75;UBERON:0001016!3.19e-09!75;UBERON:0001017!5.22e-09!73;UBERON:0005743!5.22e-09!73;UBERON:0007811!9.45e-08!86;UBERON:0002791!1.10e-07!29;UBERON:0003528!1.10e-07!29;UBERON:0001893!1.10e-07!29;UBERON:0000153!3.78e-07!94;UBERON:0002619!4.08e-07!17 | |ontology_enrichment_uberon=UBERON:0002346!3.62e-17!71;UBERON:0003075!3.62e-17!71;UBERON:0007284!3.62e-17!71;UBERON:0003056!2.70e-16!49;UBERON:0000033!1.03e-15!63;UBERON:0001049!1.20e-15!52;UBERON:0005068!1.20e-15!52;UBERON:0006241!1.20e-15!52;UBERON:0007135!1.20e-15!52;UBERON:0000955!3.37e-13!50;UBERON:0006238!3.37e-13!50;UBERON:0002616!1.61e-12!49;UBERON:0003080!2.18e-12!40;UBERON:0002780!1.06e-11!39;UBERON:0001890!1.06e-11!39;UBERON:0006240!1.06e-11!39;UBERON:0002021!2.17e-10!10;UBERON:0000411!2.17e-10!10;UBERON:0001950!2.17e-10!10;UBERON:0004121!1.59e-09!102;UBERON:0000924!1.59e-09!102;UBERON:0006601!1.59e-09!102;UBERON:0002020!2.43e-09!34;UBERON:0000073!3.19e-09!75;UBERON:0001016!3.19e-09!75;UBERON:0001017!5.22e-09!73;UBERON:0005743!5.22e-09!73;UBERON:0007811!9.45e-08!86;UBERON:0002791!1.10e-07!29;UBERON:0003528!1.10e-07!29;UBERON:0001893!1.10e-07!29;UBERON:0000153!3.78e-07!94;UBERON:0002619!4.08e-07!17 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,1.60e-22,10;UBERON:0000411,1.60e-22,10;UBERON:0001950,1.60e-22,10;UBERON:0003056,2.14e-22,49;UBERON:0002346,1.02e-18,64;UBERON:0003075,1.02e-18,64;UBERON:0007284,1.02e-18,64;UBERON:0000955,1.31e-17,47;UBERON:0006238,1.31e-17,47;UBERON:0003080,1.38e-17,40;UBERON:0002616,2.83e-16,46;UBERON:0003528,2.92e-16,29;UBERON:0002791,2.92e-16,29;UBERON:0001893,2.92e-16,29;UBERON:0002780,3.34e-16,39;UBERON:0001890,3.34e-16,39;UBERON:0006240,3.34e-16,39;UBERON:0010371,1.48e-15,73;UBERON:0001049,2.55e-15,52;UBERON:0005068,2.55e-15,52;UBERON:0006241,2.55e-15,52;UBERON:0007135,2.55e-15,52;UBERON:0002619,9.34e-15,17;UBERON:0000956,1.04e-13,21;UBERON:0001869,1.04e-13,21;UBERON:0000203,1.04e-13,21;UBERON:0002020,2.95e-13,34;UBERON:0000073,4.71e-13,54;UBERON:0004121,1.86e-11,95;UBERON:0000924,1.86e-11,95;UBERON:0006601,1.86e-11,95;UBERON:0010314,6.16e-11,92;UBERON:0001017,2.03e-10,73;UBERON:0001016,5.47e-10,75 | |||
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| ||
|short_description=p@chr6:110890863..110890867,+ | |short_description=p@chr6:110890863..110890867,+ | ||
}} | }} |
Latest revision as of 21:30, 4 August 2015
Short description: | p@chr6:110890863..110890867, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:110890863..110890867, + |
Coexpression cluster: | MCL_coexpression_mm9:236 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
occipital lobe | 1.60e-22 | 10 |
visual cortex | 1.60e-22 | 10 |
neocortex | 1.60e-22 | 10 |
pre-chordal neural plate | 2.14e-22 | 49 |
neurectoderm | 1.02e-18 | 64 |
neural plate | 1.02e-18 | 64 |
presumptive neural plate | 1.02e-18 | 64 |
brain | 1.31e-17 | 47 |
future brain | 1.31e-17 | 47 |
anterior neural tube | 1.38e-17 | 40 |
regional part of brain | 2.83e-16 | 46 |
brain grey matter | 2.92e-16 | 29 |
regional part of telencephalon | 2.92e-16 | 29 |
telencephalon | 2.92e-16 | 29 |
regional part of forebrain | 3.34e-16 | 39 |
forebrain | 3.34e-16 | 39 |
future forebrain | 3.34e-16 | 39 |
ecto-epithelium | 1.48e-15 | 73 |
neural tube | 2.55e-15 | 52 |
neural rod | 2.55e-15 | 52 |
future spinal cord | 2.55e-15 | 52 |
neural keel | 2.55e-15 | 52 |
regional part of cerebral cortex | 9.34e-15 | 17 |
cerebral cortex | 1.04e-13 | 21 |
cerebral hemisphere | 1.04e-13 | 21 |
pallium | 1.04e-13 | 21 |
gray matter | 2.95e-13 | 34 |
regional part of nervous system | 4.71e-13 | 54 |
ectoderm-derived structure | 1.86e-11 | 95 |
ectoderm | 1.86e-11 | 95 |
presumptive ectoderm | 1.86e-11 | 95 |
structure with developmental contribution from neural crest | 6.16e-11 | 92 |
central nervous system | 2.03e-10 | 73 |
nervous system | 5.47e-10 | 75 |