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FFCP PHASE1:Mm9::chr4:135050414..135050498,-: Difference between revisions

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{{FFCP|EntrezGene=74552|HGNC=|MCL_coexpression_id=1|UniProt=E9Q4S0,A2A987,A2A988,Q8BGN5|association_with_transcript=0bp_to_ENSMUST00000063906,ENSMUST00000105856,ENSMUST00000154417,NM_028995,uc008vgn.1,uc008vgo.1_5end|description=CAGE_peak_1_at_Nipal3_5end|id=chr4:135050414..135050498,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!2.05e-15!73;UBERON:0005743!2.05e-15!73;UBERON:0000073!2.37e-14!75;UBERON:0001016!2.37e-14!75;UBERON:0001049!1.85e-13!52;UBERON:0005068!1.85e-13!52;UBERON:0006241!1.85e-13!52;UBERON:0007135!1.85e-13!52;UBERON:0000955!1.93e-13!50;UBERON:0006238!1.93e-13!50;UBERON:0000033!2.08e-13!63;UBERON:0002616!6.88e-13!49;UBERON:0004121!2.53e-11!102;UBERON:0000924!2.53e-11!102;UBERON:0006601!2.53e-11!102;UBERON:0002346!1.19e-10!71;UBERON:0003075!1.19e-10!71;UBERON:0007284!1.19e-10!71;UBERON:0007811!6.66e-10!86;UBERON:0003080!1.93e-09!40;UBERON:0003056!3.04e-09!49;UBERON:0002780!7.27e-09!39;UBERON:0001890!7.27e-09!39;UBERON:0006240!7.27e-09!39;UBERON:0002020!3.50e-08!34;UBERON:0000480!1.36e-07!308;UBERON:0000467!1.36e-07!308;UBERON:0000153!3.35e-07!94|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.05e-15,73;UBERON:0000073,1.18e-14,54;UBERON:0001016,2.37e-14,75;UBERON:0001049,1.85e-13,52;UBERON:0005068,1.85e-13,52;UBERON:0006241,1.85e-13,52;UBERON:0007135,1.85e-13,52;UBERON:0004121,8.07e-13,95;UBERON:0000924,8.07e-13,95;UBERON:0006601,8.07e-13,95;UBERON:0002346,1.35e-12,64;UBERON:0003075,1.35e-12,64;UBERON:0007284,1.35e-12,64;UBERON:0000955,1.10e-11,47;UBERON:0006238,1.10e-11,47;UBERON:0002616,3.73e-11,46;UBERON:0010371,1.34e-10,73;UBERON:0003080,1.93e-09,40;UBERON:0003056,3.04e-09,49;UBERON:0011216,3.49e-09,194;UBERON:0002780,7.26e-09,39;UBERON:0001890,7.26e-09,39;UBERON:0006240,7.26e-09,39;UBERON:0002020,3.50e-08,34;UBERON:0010314,5.37e-08,92|phase1_expression=12.0111635328595,7.32848356042658,5.91499011206397,9.98131897312539,9.01612313903425,6.04365378882803,4.67225281191051,20.2723617803275,3.51971805379167,3.27690336850791,0.34243593645101,1.03703806693937,21.9136934311943,20.6312149708834,8.99396356902289,12.9584171129489,11.8925519281785,14.5112596064789,15.76815986466,14.004858509335,14.627445905984,12.5106598513115,8.8807928307238,7.67963629408352,6.42345986988076,4.01962374880514,4.73838195774982,4.74036711908956,10.4512880701006,7.05684363327806,3.32595765982957,8.89042942843484,11.0711661765223,15.8481681015439,6.35473563452804,3.82339684324532,5.51257261908397,13.393012183581,10.1573594788094,7.32933241563318,15.2940186888064,21.1744100337118,14.5653105909346,1.76255545165808,1.4192770370732,1.46837401729345,3.9119567217402,14.3896603211095,18.0142669842267,13.4156630361256,7.41928034614421,24.4379359420452,14.7648693330808,27.5637613964311,18.1490651536931,1.28629718017973,4.01146815914259,2.57836046138721,9.91350658212029,18.5146842745212,7.60597684207415,1.69422266034566,2.66788438833342,10.7987966073768,6.92206453796882,12.7886420690298,16.4780060785123,36.1165207002261,4.35496371695606,5.13022565660425,2.52389953621658,27.9937964715728,24.0746709637259,5.38959516545798,4.69642807989358,7.35375029288017,33.0347642998166,37.9231394113008,35.7903222487047,12.5291973343684,15.5528994124096,15.106487746146,41.8774498502071,46.1465340225978,38.3523601919793,16.4992007865254,17.7964600998879,10.2519695203915,1.4387976733305,7.02815508993105,12.1743085254705,0.860423876981386,1.3599426674155,4.85732872474035,7.14754059192436,3.13618820968135,10.6737759300131,0,0,0,11.2674735821344,0,0,0,2.16491041011214,3.29367825117628,2.02209778005913,7.9928715803342,19.9382170408322,10.0940654564081,5.89850111004862,6.08930956624282,3.68984795609694,4.97384713823654,7.4080885495494,8.04266184509923,13.1013332899218,7.37456720291549,16.8076004870476,4.36770494858005,8.39197770149496,7.75800405016355,27.9587641827183,29.5708604981663,28.065858713003,12.7728527604296,3.71426885968353,1.19980546198682,4.06624726633807,42.5405415909696,36.1425476226715,11.8115090986093,32.8527965163402,36.0558794835766,39.8953045554355,30.6635987198062,3.86989582631202,9.70374370758726,7.32895999457657,20.412860020988,5.85541993332167,6.89706313300419,6.12211241338187,5.87748789559289,11.0899493616664,10.7615525039274,14.8048724804372,25.6116337031625,3.01795190105979,3.21480336285293,3.51902248327898,4.60311038097907,2.78047249225598,2.43776516565517,4.11564272815887,4.77682240364384,1.40442637462647,2.83082697826187,1.42081749697796,3.72826390563903,5.15957331958412,4.50155153652537,7.10234206755631,6.49321964766433,5.86215028972037,6.51095045301142,8.04820204198858,12.8441876603886,8.06343264576054,10.5067177010621,10.7821516695988,11.5497990066013,9.22110484222413,13.8232611323183,24.1833440848746,6.48299057989492,18.1730330641089,2.90895623329899,2.98603550749328,6.73486348395272,6.05677068213839,9.68080918192044,8.89512175379481,11.0330863145284,17.0830462156024,14.1641101062649,17.3421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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:74552
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=uniprot:E9Q4S0,uniprot:A2A987,uniprot:A2A988,uniprot:Q8BGN5
|association_with_transcript=0bp_to_ENSMUST00000063906,ENSMUST00000105856,ENSMUST00000154417,NM_028995,uc008vgn.1,uc008vgo.1_5end
|cluster_id=chr4:135050414..135050498,-
|description=CAGE_peak_1_at_Nipal3_5end
|id=chr4:135050414..135050498,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!2.05e-15!73;UBERON:0005743!2.05e-15!73;UBERON:0000073!2.37e-14!75;UBERON:0001016!2.37e-14!75;UBERON:0001049!1.85e-13!52;UBERON:0005068!1.85e-13!52;UBERON:0006241!1.85e-13!52;UBERON:0007135!1.85e-13!52;UBERON:0000955!1.93e-13!50;UBERON:0006238!1.93e-13!50;UBERON:0000033!2.08e-13!63;UBERON:0002616!6.88e-13!49;UBERON:0004121!2.53e-11!102;UBERON:0000924!2.53e-11!102;UBERON:0006601!2.53e-11!102;UBERON:0002346!1.19e-10!71;UBERON:0003075!1.19e-10!71;UBERON:0007284!1.19e-10!71;UBERON:0007811!6.66e-10!86;UBERON:0003080!1.93e-09!40;UBERON:0003056!3.04e-09!49;UBERON:0002780!7.27e-09!39;UBERON:0001890!7.27e-09!39;UBERON:0006240!7.27e-09!39;UBERON:0002020!3.50e-08!34;UBERON:0000480!1.36e-07!308;UBERON:0000467!1.36e-07!308;UBERON:0000153!3.35e-07!94
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.05e-15,73;UBERON:0000073,1.18e-14,54;UBERON:0001016,2.37e-14,75;UBERON:0001049,1.85e-13,52;UBERON:0005068,1.85e-13,52;UBERON:0006241,1.85e-13,52;UBERON:0007135,1.85e-13,52;UBERON:0004121,8.07e-13,95;UBERON:0000924,8.07e-13,95;UBERON:0006601,8.07e-13,95;UBERON:0002346,1.35e-12,64;UBERON:0003075,1.35e-12,64;UBERON:0007284,1.35e-12,64;UBERON:0000955,1.10e-11,47;UBERON:0006238,1.10e-11,47;UBERON:0002616,3.73e-11,46;UBERON:0010371,1.34e-10,73;UBERON:0003080,1.93e-09,40;UBERON:0003056,3.04e-09,49;UBERON:0011216,3.49e-09,194;UBERON:0002780,7.26e-09,39;UBERON:0001890,7.26e-09,39;UBERON:0006240,7.26e-09,39;UBERON:0002020,3.50e-08,34;UBERON:0010314,5.37e-08,92
|phase1_expression=12.0111635328595,7.32848356042658,5.91499011206397,9.98131897312539,9.01612313903425,6.04365378882803,4.67225281191051,20.2723617803275,3.51971805379167,3.27690336850791,0.34243593645101,1.03703806693937,21.9136934311943,20.6312149708834,8.99396356902289,12.9584171129489,11.8925519281785,14.5112596064789,15.76815986466,14.004858509335,14.627445905984,12.5106598513115,8.8807928307238,7.67963629408352,6.42345986988076,4.01962374880514,4.73838195774982,4.74036711908956,10.4512880701006,7.05684363327806,3.32595765982957,8.89042942843484,11.0711661765223,15.8481681015439,6.35473563452804,3.82339684324532,5.51257261908397,13.393012183581,10.1573594788094,7.32933241563318,15.2940186888064,21.1744100337118,14.5653105909346,1.76255545165808,1.4192770370732,1.46837401729345,3.9119567217402,14.3896603211095,18.0142669842267,13.4156630361256,7.41928034614421,24.4379359420452,14.7648693330808,27.5637613964311,18.1490651536931,1.28629718017973,4.01146815914259,2.57836046138721,9.91350658212029,18.5146842745212,7.60597684207415,1.69422266034566,2.66788438833342,10.7987966073768,6.92206453796882,12.7886420690298,16.4780060785123,36.1165207002261,4.35496371695606,5.13022565660425,2.52389953621658,27.9937964715728,24.0746709637259,5.38959516545798,4.69642807989358,7.35375029288017,33.0347642998166,37.9231394113008,35.7903222487047,12.5291973343684,15.5528994124096,15.106487746146,41.8774498502071,46.1465340225978,38.3523601919793,16.4992007865254,17.7964600998879,10.2519695203915,1.4387976733305,7.02815508993105,12.1743085254705,0.860423876981386,1.3599426674155,4.85732872474035,7.14754059192436,3.13618820968135,10.6737759300131,0,0,0,11.2674735821344,0,0,0,2.16491041011214,3.29367825117628,2.02209778005913,7.9928715803342,19.9382170408322,10.0940654564081,5.89850111004862,6.08930956624282,3.68984795609694,4.97384713823654,7.4080885495494,8.04266184509923,13.1013332899218,7.37456720291549,16.8076004870476,4.36770494858005,8.39197770149496,7.75800405016355,27.9587641827183,29.5708604981663,28.065858713003,12.7728527604296,3.71426885968353,1.19980546198682,4.06624726633807,42.5405415909696,36.1425476226715,11.8115090986093,32.8527965163402,36.0558794835766,39.8953045554355,30.6635987198062,3.86989582631202,9.70374370758726,7.32895999457657,20.412860020988,5.85541993332167,6.89706313300419,6.12211241338187,5.87748789559289,11.0899493616664,10.7615525039274,14.8048724804372,25.6116337031625,3.01795190105979,3.21480336285293,3.51902248327898,4.60311038097907,2.78047249225598,2.43776516565517,4.11564272815887,4.77682240364384,1.40442637462647,2.83082697826187,1.42081749697796,3.72826390563903,5.15957331958412,4.50155153652537,7.10234206755631,6.49321964766433,5.86215028972037,6.51095045301142,8.04820204198858,12.8441876603886,8.06343264576054,10.5067177010621,10.7821516695988,11.5497990066013,9.22110484222413,13.8232611323183,24.1833440848746,6.48299057989492,18.1730330641089,2.90895623329899,2.98603550749328,6.73486348395272,6.05677068213839,9.68080918192044,8.89512175379481,11.0330863145284,17.0830462156024,14.1641101062649,17.3421294072186,16.5133871794155,17.7417319278399,15.2799299471218,14.4812493416045,11.5501938487533,5.69003702859245,4.91268604221834,10.1436962105772,7.127796474586,7.5641469995374,9.46833568519301,10.8766843853723,13.2849133181642,13.1878931386755,12.8333050478673,2.37162101669719,6.34011401721157,6.4864468387357,5.39669069723649,10.1430060694251,8.20002343158217,6.62027214631691,6.90470729881945,7.13394997810156,4.66754402419738,7.18841032636773,3.72140947668503,4.68056509671841,3.78868316920668,3.94674309748207,4.82443521363367,32.3318082791558,4.9267767060326,6.35563408123901,5.26209765903083,8.21415869009757,10.887906733718,15.4728366575909,22.8306367993625,17.6551361398934,22.589398344175,22.9614866866781,23.5963173190663,22.4490476425664,29.9423551263729,15.0791283939272,5.4390568381871,2.45882136509518,1.93155722413313,36.4449839272288,37.0388929631362,0.491804836130026,9.08895337935743,6.94118082715765,7.41833614163613,7.53981892064796,7.16906393857656,6.68396022247182,5.66153061577665,8.09621403349789,8.47541987942804,9.48690667071656,29.5615611108062,11.9229671574946,6.23229612835393,6.35259141478947,16.332042174281,14.6019652173959,4.37005145078967,9.06970670894253,12.8251454234011,15.651000322681,12.912276213645,13.9551278310839,11.9966130727577,8.55593708123331,13.2735438333043,6.32511651449993,18.5643977846736,18.0432991049508,8.28281032544027,12.4184336431444,8.78781843629528,13.6551979904551,13.0209236849512,12.6702745863633,19.4857567433344,5.86679270159276,5.71946591332314,8.60060752414351,7.25499512942512,8.39615018818709,4.644095219468,7.87857470420701,9.02774948597837,12.5336759750836,36.3433591940599,13.6696704638282,3.92135049130123,6.85219751267933,13.3741604473331,11.4823151285661,12.5827995263587,10.538662659619,8.81694149639045,8.01559848065658,8.59203556213602,3.79603192297362,5.69294507955176,5.83228840437727,5.85447228840512,7.20596460362386,10.3845546716312,12.4806718145257,13.8730649251536,20.8680106999787,10.5627683224777,0.56369293868419,3.13984746692355,3.80554528051325,3.11121901350476,3.22899558694328,5.4065960157049,4.69428954583016,3.77592716047455,4.8235298435827,1.69108884578204,2.30424005006292,19.2766783583189,4.45995473638361,4.72470402958205,5.45667456506739,9.30938817470904,11.5235185773134,10.0964177596774,11.2244040652679,12.2169404437259,11.354814191595,11.4941851055998,15.8856345605796,13.4696578296461,17.4146584250538,9.74940649545409,2.66383144048878,0.717710852875806,1.17519231454855,22.7963720957985,7.50729901804728,11.1722490803032,11.1471557121114,6.52043735245972,29.3670958160875,29.0004898999521,30.9363577257274,27.6683623573337,21.9226406326606,27.9495742034189,29.0259675099676,25.6683085837806,21.7508356312418,25.888015587591,2.17953429926771,5.1873233542134,5.12200817262403,5.83456120963906,2.51535795153579,4.04455718590031,4.00044110042907,4.53277125925567,6.73930340142812,6.57012750585873,6.59046179714623,5.47016390019621,6.9294715527713,7.68301828858431,7.12199815049605,8.09699275181225,6.95305955669133,5.40145817298374,6.59337441285291,6.32955356577908,5.82877729055206,5.14679837862079,4.76872379894642,5.95920308192547,5.64656282491984,6.59993941555077,5.85369513192872,3.94604567156764,5.16055632614275,5.61142271657738,4.86403574309114,4.72821515402705,5.72923460437565,5.73266312388074,7.71626443924566,8.74337022782811,7.25187986180766,7.73535794573874,4.97349663378993,7.0589254118245,7.65163857547391
|short_description=p1@Nipal3
}}

Revision as of 23:09, 4 August 2015

Short description:p1@Nipal3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Nipal3_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 0bp_to_ENSMUST00000063906, ENSMUST00000105856, ENSMUST00000154417, NM_028995, uc008vgn.1, uc008vgo.1_5end
EntrezGene:74552
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Nipal3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G712.01
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I57.33
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I65.91
CD326+ enterocyte, pool1.CNhs13542.11848-124I39.98
CD326+ enterocyte, pool2.CNhs13197.11849-124I49.02
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I76.04
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I84.67
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E920.27
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E73.52
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F23.28
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.34
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F11.04
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E421.91
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E820.63
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A18.99
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A312.96
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A511.89
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A214.51
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A415.77
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A614.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A314.63
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H212.51
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I98.88
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D17.68
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D26.42
GP2+ M cell, pool1.CNhs13228.11845-124H94.02
GP2+ M cell, pool2.CNhs13231.11846-124I14.74
GP2+ M cell, pool3.CNhs13240.11847-124I24.74
Ileum epithelium, pool1.CNhs13199.10252-104B910.45
Ileum epithelium, pool2.CNhs13232.10253-104C17.06
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C83.33
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I38.89
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G611.07
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F56.35
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F63.82
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F75.51
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G813.39
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H110.16
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H37.33
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G915.29
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H221.17
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H414.57
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.76
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.42
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B31.47
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B73.91
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C214.39
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B818.01
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C313.42
Mouse Astrocytes, donor2.CNhs12078.11552-120C47.42
Mouse Astrocytes, donor3.CNhs12107.11633-122C424.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A214.76
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I927.56
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A118.15
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.29
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E14.01
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C52.58
Mouse Granule cells, donor1.CNhs12131.11713-123C39.91
Mouse Granule cells, donor2.CNhs12357.11731-123E318.51
Mouse Granule cells, donor3.CNhs12108.11636-122C77.61
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.69
Mouse Meningeal cells, donor3.CNhs12109.11639-122D12.67
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C710.80
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E76.92
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D212.79
Mouse Microglia, donor1.CNhs12629.11718-123C816.48
Mouse Microglia, donor2.CNhs12634.11736-123E836.12
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D54.35
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F55.13
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.52
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F127.99
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D524.07
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D25.39
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F24.70
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D67.35
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D333.03
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F337.92
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D735.79
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D412.53
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F415.55
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D815.11
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E441.88
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E546.15
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I638.35
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D616.50
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F617.80
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E110.25
Mouse Schwann, donor1.CNhs12507.11728-123D91.44
Mouse Schwann, donor2.CNhs12573.11746-123F97.03
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G312.17
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C41.36
Mouse hepatocyte, donor3.CNhs12615.11637-122C84.86
Mouse hepatocyte, donor6.CNhs13090.11822-124F47.15
Mouse hepatocyte, donor8.CNhs13091.11824-124F63.14
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A710.67
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G611.27
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G12.16
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G23.29
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G32.02
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B67.99
accessory axillary lymph node, adult.CNhs10475.1063-29H919.94
adrenal gland, adult.CNhs10508.49-24D710.09
adrenal gland, embryo E14.CNhs11038.406-44C55.90
adrenal gland, embryo E16.CNhs11004.1254-43D66.09
adrenal gland, embryo E17.CNhs11043.1263-45I13.69
adrenal gland, embryo E18.CNhs11026.1262-18F54.97
adrenal gland, neonate N00.CNhs11191.1311-23C17.41
adrenal gland, neonate N25.CNhs11223.1377-27I38.04
amnion, adult pregnant day17.5.CNhs10488.583-22A813.10
aorta, adult.CNhs10498.46-23H17.37
bone (os femoris), adult.CNhs10483.56-12G216.81
bone (os femoris), neonate N02.CNhs11227.1985-43F54.37
bone (os femoris), neonate N16.CNhs11225.1525-43A68.39
bone (os femoris), neonate N20.CNhs11195.1350-25C37.76
cecum, adult.CNhs10467.37-13H427.96
cerebellum, adult.CNhs10494.15-8B229.57
cerebellum, neonate N30.CNhs11135.1395-42I228.07
colon, adult.CNhs10468.36-18H712.77
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C73.71
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D44.07
corpora quadrigemina, adult.CNhs10501.16-22A442.54
corpus striatum, adult.CNhs10487.19-21D836.14
corpus striatum, neonate N00.CNhs11226.630-43F111.81
cortex, adult.CNhs10473.12-14D532.85
cortex, neonate N30.CNhs11107.1392-42F236.06
diencephalon, adult.CNhs10482.20-12F239.90
diencephalon, neonate N30.CNhs11201.1388-42B230.66
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B13.87
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A29.70
epididymis, adult.CNhs10490.58-23B27.33
eyeball, adult.CNhs10484.31-12G420.41
eyeball, embryo E12.CNhs11016.345-16C65.86
eyeball, embryo E14.CNhs10521.399-16E26.90
eyeball, embryo E15.CNhs10593.426-16C96.12
eyeball, embryo E17.CNhs11023.1261-18D45.88
eyeball, neonate N00.CNhs11207.633-15C611.09
eyeball, neonate N01.CNhs11140.1532-43E710.76
eyeball, neonate N02.CNhs11205.1551-44G814.80
eyeball, neonate N16.CNhs11188.777-19A225.61
forelimb, embryo E11.CNhs10596.335-25E23.02
forelimb, embryo E12.CNhs10600.359-14H23.21
forelimb, embryo E13.CNhs10589.384-1E23.52
forelimb, embryo E14.CNhs10577.413-26A84.60
forelimb, embryo E15.CNhs11007.437-20E72.78
forelimb, embryo E17.CNhs10598.1517-43C42.44
forelimb, embryo E18.CNhs11008.1520-43B54.12
gonad, embryo E13.CNhs11044.1564-45I64.78
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C81.40
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D22.83
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D51.42
heart, embryo E11.CNhs10586.331-24E93.73
heart, embryo E12.CNhs11015.353-12F55.16
heart, embryo E13.CNhs11013.376-3I94.50
heart, embryo E14.CNhs10597.403-26D47.10
heart, embryo E15.CNhs11017.431-16C86.49
heart, embryo E16.CNhs11021.457-17C65.86
heart, embryo E17.CNhs11025.479-18E56.51
heart, embryo E18.CNhs11030.1283-20G38.05
heart, neonate N00.CNhs11213.639-21E312.84
heart, neonate N03.CNhs11221.1349-25I28.06
heart, neonate N10.CNhs11118.749-24G110.51
heart, neonate N16.CNhs11209.782-15G110.78
heart, neonate N20.CNhs11127.821-26I611.55
heart, neonate N25.CNhs11196.1351-25D39.22
heart, neonate N30.CNhs11202.1390-42D213.82
hippocampus, adult.CNhs10478.13-16E824.18
hippocampus, neonate N00.CNhs11228.627-43G16.48
intestinal mucosa, adult.CNhs10506.860-29I318.17
intestine, adult.CNhs10496.178-9A32.91
intestine, embryo E12.CNhs11019.1251-16I52.99
intestine, embryo E13.CNhs11010.381-16D56.73
intestine, embryo E15.CNhs10602.976-16D86.06
intestine, embryo E16.CNhs10585.463-22H49.68
intestine, embryo E17.CNhs10582.482-18D38.90
intestine, embryo E18.CNhs10526.1289-20F711.03
intestine, neonate N00.CNhs11126.644-26D117.08
intestine, neonate N01.CNhs11192.1322-23E914.16
intestine, neonate N06.CNhs11102.688-20B817.34
intestine, neonate N07.CNhs11095.720-20F216.51
intestine, neonate N10.CNhs11098.755-23A517.74
intestine, neonate N20.CNhs11187.827-18D115.28
intestine, neonate N25.CNhs11121.1352-25E314.48
intestine, neonate N30.CNhs11131.1384-42G111.55
kidney, embryo E14.CNhs10606.411-4I95.69
kidney, embryo E15.CNhs10997.434-16F84.91
kidney, embryo E16.CNhs10584.464-22A510.14
kidney, embryo E17.CNhs11028.483-18I27.13
kidney, embryo E18.CNhs11001.1288-20C77.56
kidney, neonate N00.CNhs11214.646-21G79.47
kidney, neonate N10.CNhs11206.758-6D510.88
kidney, neonate N20.CNhs11113.832-19I113.28
kidney, neonate N25.CNhs11122.1353-25F313.19
kidney, neonate N30.CNhs11203.1385-42H112.83
liver, adult pregnant day01.CNhs10466.508-5B22.37
liver, embryo E12.CNhs10601.355-15F86.34
liver, embryo E13.CNhs10524.378-3H66.49
liver, embryo E14.CNhs10594.409-16E15.40
liver, embryo E15.CNhs10520.433-16D710.14
liver, embryo E16.CNhs10523.462-17F58.20
liver, embryo E17.CNhs10510.481-18A36.62
liver, embryo E18.CNhs10579.499-43G46.90
liver, neonate N00.CNhs11117.641-24F47.13
liver, neonate N03.CNhs11123.1345-25G24.67
liver, neonate N06.CNhs11101.684-20A87.19
liver, neonate N07.CNhs11103.716-20H23.72
liver, neonate N10.CNhs11115.751-24B94.68
liver, neonate N20.CNhs11220.823-25A33.79
liver, neonate N25.CNhs11198.1368-26H13.95
liver, neonate N30.CNhs11106.1382-42D14.82
lung, adult.CNhs10474.28-22B132.33
lung, embryo E12.CNhs10522.354-16G24.93
lung, embryo E14.CNhs10604.404-26F86.36
lung, embryo E15.CNhs11020.432-17C55.26
lung, embryo E16.CNhs10998.458-17B68.21
lung, embryo E17.CNhs10605.480-44A610.89
lung, embryo E18.CNhs10583.1287-20I615.47
lung, neonate N00.CNhs11224.640-42C622.83
lung, neonate N06.CNhs11212.683-20E517.66
lung, neonate N07.CNhs11111.715-19A322.59
lung, neonate N10.CNhs11219.750-23E622.96
lung, neonate N20.CNhs11109.822-18A423.60
lung, neonate N25.CNhs11119.1359-25C722.45
lung, neonate N30.CNhs11133.1394-42H229.94
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A115.08
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A15.44
mammary gland, adult lactating day02.CNhs10480.595-22B62.46
mammary gland, adult pregnant day19.CNhs10476.588-5H21.93
medulla oblongata, adult.CNhs10477.17-12C236.44
medulla oblongata, neonate N30.CNhs11200.1396-42A337.04
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.49
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C29.09
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E16.94
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E27.42
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E37.54
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D77.17
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D86.68
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D95.66
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D48.10
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D58.48
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D69.49
olfactory brain, adult.CNhs10489.18-22I929.56
ovary, adult.CNhs10507.91-2I711.92
ovary, embryo E18.CNhs11040.505-44H76.23
ovary, neonate N00.CNhs11217.1299-22I46.35
oviduct, adult pregnant day01.CNhs10500.988-6G616.33
pancreas, adult.CNhs10486.34-16E414.60
pancreas, embryo E14.CNhs11012.405-44F44.37
pancreas, embryo E15.CNhs11042.1556-45F29.07
pancreas, embryo E16.CNhs11003.460-26E512.83
pancreas, embryo E17.CNhs10599.1558-45G315.65
pancreas, embryo E18.CNhs10580.1535-43I712.91
pancreas, neonate N00.CNhs11105.645-26G913.96
pancreas, neonate N01.CNhs11138.1531-43D712.00
pancreas, neonate N02.CNhs11139.1539-43D88.56
pancreas, neonate N16.CNhs11136.787-43B613.27
pancreas, neonate N25.CNhs11094.1555-45E26.33
pancreas, neonate N30.CNhs11182.1548-44H518.56
pituitary gland, adult.CNhs10493.21-1G818.04
pituitary gland, embryo E12.CNhs11018.346-16E68.28
pituitary gland, embryo E13.CNhs11009.370-44C712.42
pituitary gland, embryo E14.CNhs11037.398-44A58.79
pituitary gland, embryo E15.CNhs10592.427-16B913.66
pituitary gland, embryo E16.CNhs11036.449-43F613.02
pituitary gland, embryo E17.CNhs11039.1265-44F512.67
pituitary gland, neonate N00.CNhs11190.1308-22E919.49
placenta, adult pregnant day10.CNhs10472.539-13I75.87
placenta, adult pregnant day17.CNhs10464.577-18G35.72
prostate, adult.CNhs10470.859-1F88.60
skin, adult.CNhs10492.30-1C37.25
skin, neonate N00.CNhs11124.650-25G48.40
skin, neonate N03.CNhs11215.662-22H34.64
skin, neonate N06.CNhs11097.693-20I57.88
skin, neonate N10.CNhs11108.762-6C49.03
small intestine, neonate N16.CNhs11114.790-21I112.53
spinal cord, adult.CNhs10505.24-13C936.34
spleen, adult.CNhs10465.25-2G213.67
spleen, embryo E16.CNhs11035.461-43C13.92
spleen, embryo E18.CNhs11011.1271-21F26.85
spleen, neonate N10.CNhs11116.752-24D113.37
spleen, neonate N20.CNhs11112.824-19H111.48
spleen, neonate N25.CNhs11099.1354-25G312.58
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C610.54
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C98.82
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D38.02
stomach, adult.CNhs10503.33-1H68.59
stomach, embryo E12.CNhs10588.356-43E33.80
stomach, embryo E15.CNhs10603.1252-16G85.69
stomach, embryo E16.CNhs11022.459-17D45.83
stomach, embryo E17.CNhs11006.1035-18D55.85
stomach, embryo E18.CNhs10999.1286-20C67.21
stomach, neonate N03.CNhs11193.1340-24B810.38
stomach, neonate N07.CNhs11210.718-18A912.48
stomach, neonate N25.CNhs11104.1355-25E413.87
stomach, neonate N30.CNhs11134.1386-42I120.87
submandibular gland, adult.CNhs10469.59-29C110.56
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F53.14
testis, embryo E15.CNhs11034.443-27C53.81
testis, embryo E16.CNhs11033.470-26G53.11
testis, embryo E17.CNhs11029.486-18I53.23
testis, embryo E18.CNhs11027.503-18G55.41
testis, neonate N00.CNhs11189.1300-22B74.69
testis, neonate N07.CNhs11222.726-26I43.78
testis, neonate N10.CNhs11204.763-44D94.82
testis, neonate N20.CNhs11110.839-18H31.69
testis, neonate N30.CNhs11130.1391-42E22.30
thymus, adult.CNhs10471.38-12B519.28
thymus, embryo E14.CNhs11041.402-44I44.46
thymus, embryo E15.CNhs11005.430-45I24.72
thymus, embryo E16.CNhs11002.456-26C55.46
thymus, embryo E17.CNhs10581.478-18C19.31
thymus, embryo E18.CNhs10595.1273-19G411.52
thymus, neonate N02.CNhs11181.1541-43F810.10
thymus, neonate N03.CNhs11137.2104-43C711.22
thymus, neonate N06.CNhs11197.681-26C412.22
thymus, neonate N07.CNhs11211.713-19D311.35
thymus, neonate N10.CNhs11194.748-24E411.49
thymus, neonate N20.CNhs11186.820-7A215.89
thymus, neonate N25.CNhs11125.1362-25G713.47
thymus, neonate N30.CNhs11132.1393-42G217.41
tongue, adult.CNhs10499.32-1B49.75
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H32.66
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.72
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G51.18
urinary bladder, adult.CNhs10481.879-12E422.80
uterus, adult pregnant day19.CNhs10497.590-15F57.51
uterus, adult.CNhs10509.92-27E511.17
vagina, adult.CNhs10502.89-27D511.15
vesicular gland, adult.CNhs10491.51-27F86.52
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A129.37
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A229.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A330.94
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D727.67
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A421.92
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A527.95
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A629.03
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A725.67
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A821.75
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A925.89
whole body, embryo E11.CNhs11014.324-5I82.18
whole body, embryo E12.CNhs10587.857-27C95.19
whole body, embryo E13.CNhs10512.372-23H25.12
whole body, embryo E14.5.CNhs10578.420-27D25.83
whole body, embryo E14.CNhs10519.395-14B12.52
whole body, embryo E16.CNhs10514.453-14F24.04
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G54.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G54.53
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G56.74
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G56.57
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G56.59
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G55.47
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G56.93
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G57.68
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G57.12
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G58.10
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G56.95
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G55.40
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G56.59
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G56.33
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G55.83
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G55.15
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G54.77
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G55.96
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G55.65
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G56.60
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G55.85
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G53.95
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G55.16
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G55.61
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G54.86
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G54.73
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G55.73
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G55.73
whole body, embryo E17.5.CNhs10513.490-9F97.72
whole body, embryo E17.CNhs10517.475-3I58.74
whole body, embryo E18.CNhs10516.493-3B37.25
whole body, neonate N00.CNhs10525.657-19C27.74
whole body, neonate N01.CNhs10576.659-23C64.97
whole body, neonate N06.CNhs10515.692-21D17.06
whole body, neonate N10.CNhs10518.761-6B47.65





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

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