FFCP PHASE1:Mm9::chr2:37631801..37631817,+: Difference between revisions
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{{FFCP|EntrezGene=241324|HGNC=|MCL_coexpression_id=310|UniProt=Q80YA8|association_with_transcript=32bp_to_ENSMUST00000050372,NM_001163566,uc008jnf.2_5end|description=CAGE_peak_2_at_Crb2_5end|id=chr2:37631801..37631817,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002453,1.45e-12,8;CL:0002319,3.17e-11,43;CL:0000221,7.36e-11,44;CL:0000133,7.36e-11,44;CL:0002609,6.26e-10,6;CL:0000333,9.04e-10,10;CL:0000095,9.04e-10,10;CL:0000243,9.04e-10,10;CL:0000123,9.04e-10,10;CL:0000125,9.04e-10,10;CL:0000030,9.04e-10,10;CL:0000339,9.04e-10,10;CL:0000128,3.40e-09,6;CL:0000126,3.40e-09,6;CL:0000127,3.40e-09,6;CL:0000117,2.09e-08,23;CL:0000337,2.09e-08,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003056!7.26e-11!49;UBERON:0000033!6.72e-10!63;UBERON:0002346!3.23e-09!71;UBERON:0003075!3.23e-09!71;UBERON:0007284!3.23e-09!71;UBERON:0000970!3.49e-08!9;UBERON:0000019!3.49e-08!9;UBERON:0000047!3.49e-08!9;UBERON:0004088!3.49e-08!9;UBERON:0002104!3.49e-08!9;UBERON:0001456!3.49e-08!9;UBERON:0003072!3.49e-08!9;UBERON:0003071!3.49e-08!9;UBERON:0004128!3.49e-08!9;UBERON:0004121!7.07e-07!102;UBERON:0000924!7.07e-07!102;UBERON:0006601!7.07e-07!102;UBERON:0001049!9.56e-07!52;UBERON:0005068!9.56e-07!52;UBERON:0006241!9.56e-07!52;UBERON:0007135!9.56e-07!52|ontology_enrichment_uberon_v019_2=UBERON:0003056,2.39e-24,49;UBERON:0002346,1.47e-18,64;UBERON:0003075,1.47e-18,64;UBERON:0007284,1.47e-18,64;UBERON:0004121,4.22e-18,95;UBERON:0000924,4.22e-18,95;UBERON:0006601,4.22e-18,95;UBERON:0000970,1.32e-17,9;UBERON:0000019,1.32e-17,9;UBERON:0000047,1.32e-17,9;UBERON:0010312,1.32e-17,9;UBERON:0004088,1.32e-17,9;UBERON:0002104,1.32e-17,9;UBERON:0001456,1.32e-17,9;UBERON:0003072,1.32e-17,9;UBERON:0004128,1.32e-17,9;UBERON:0003071,1.32e-17,9;UBERON:0010371,2.59e-15,73;UBERON:0001444,5.15e-14,11;UBERON:0000020,1.14e-12,12;UBERON:0001032,1.14e-12,12;UBERON:0004456,1.14e-12,12;UBERON:0002780,1.26e-12,39;UBERON:0001890,1.26e-12,39;UBERON:0006240,1.26e-12,39;UBERON:0010314,1.35e-12,92;UBERON:0003080,3.45e-12,40;UBERON:0001017,3.70e-12,73;UBERON:0001016,1.20e-11,75;UBERON:0000033,1.56e-11,13;UBERON:0005085,1.56e-11,13;UBERON:0002616,1.91e-11,46;UBERON:0000955,4.31e-11,47;UBERON:0006238,4.31e-11,47;UBERON:0000007,7.62e-11,8;UBERON:0003296,7.62e-11,8;UBERON:0010133,7.62e-11,8;UBERON:0000073,5.25e-10,54;UBERON:0001049,1.54e-09,52;UBERON:0005068,1.54e-09,52;UBERON:0006241,1.54e-09,52;UBERON:0007135,1.54e-09,52;UBERON:0001954,2.10e-09,7;UBERON:0003022,2.10e-09,7;UBERON:0002421,2.10e-09,7;UBERON:0000349,2.10e-09,7;UBERON:0002600,2.10e-09,7;UBERON:0001894,1.96e-08,10;UBERON:0006222,1.96e-08,10|phase1_expression=0.160148847104794,0.348975407639361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.3518867285335,13.4008571468028,14.5822424305713,6.01941612989059,8.62515386189829,0,0,0,0,0.286533439938757,1.54701627683233,3.23706337375356,0.528990979272033,1.26766280701236,1.69422266034566,0,0,0,0,2.39680088414724,9.22123932771731,2.38486108309499,1.62007125998029,1.68259969081106,0,0.220868540951614,1.95985278743926,1.43768206527355,2.75765635983006,1.10115880999389,0,0,2.76961204233407,2.37867873366265,2.6045668527838,0,0,0.15279824777681,0,0.569486723196412,0.559198337475902,0,0,0.289864488701678,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0.148442139064825,0.867426633830679,0,0,0,0.352766121407114,0,0.247194967734374,0,0,0,0,0,0,0.292780797011547,0.628340120440365,0,0,0,0,0.299581278809645,0.457500602818626,0.879580464790051,0,0,0.41557608911912,0,1.01839363850316,0,0,2.94618598241064,4.94457683258274,6.20735681970377,5.40186389416048,3.76762044589288,8.70867189136997,4.09963904911519,3.84177070694888,5.95017752699736,0.646703978798527,0,0,0,0,0,0,0.995171334092466,0,0,0,2.48550927042602,0.469052119962192,0.180062061461015,0.710234206755631,0.196764231747404,0.308534225774757,0.232533944750408,0.268273401399619,0.350296027101508,0.16455984991348,0.164167464079095,0,0.146199987425332,0.439100230582101,0,0.841159794256509,2.16099685996497,0,0,1.91959425481711,2.09013004674395,0.515469845288373,0.80673409849337,0.22237804384487,0.380451252225118,0,0,0.502670417600539,0,0,0,0,0,0.379335801906163,1.14248512609729,1.1270773567308,0.610953983535943,0.581857461502877,0.911765658574141,0.379419222745544,0.738050739898011,0.31399745568275,0.123397163921801,0,0.500535317148282,0.196558995113203,0,0.202860121388503,0,0.25462585178142,0,0,0,0,0,0,0,0.179397413521912,0,0.184753190166605,1.13694847062291,0.162964976442026,0.169745085775188,0.234690248288502,0,0.238043640886014,0.195133647857799,0.315270288212382,0,0,0,0,0.144649058581512,0,0,0,0,0.481651769963376,0.234423373184406,0,0,0,0,0,0,0,0,0,0,0,0,0.425820255624806,1.24645922567079,0.81443479676788,0,1.32745138339963,0.242780636154981,0.604647113929502,0.188605079755898,0.590603785761546,0,0.775284879504663,0,0.356497378384721,0.316036757935816,0,2.06271086496374,0.680879211507576,3.6012218806262,3.36332577835162,1.92903331528433,3.3694644392032,2.67553226403106,2.13913726782757,2.74018454203139,0.469343416127421,0,0.220528398054962,0,0.161464426695906,0,0,0,0.291480836629851,0.18542530201051,0,0.619160603889667,0.555583582109135,0,0,0,0,0,0,0,0.949007980743406,0.203319467126849,0.108005340821801,0.209088296014469,0.218362563746178,0.404593039154462,0.0826534557253359,0.523511883968059,0.259229946583586,0,0,1.19613236835183,1.15820943319968,0.583353565032143,0.258319646955462,0.168956125490778,0.117357238645754,0.2604087696879,0,0,0.288030006257865,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0.116876902181569,0,0,0.448569283047378,0,0.579568782096571,0,0.36630324853453,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0.415149390336707,0.798049746802062,1.02440163452481,0.243106717068294,0.209613162627982,0,0.44449345560323,0.206035057238894,0,0,0.50695859978048,0.377252682772152,0.187283014939765,0.128050304809739,0.114870937911227,0.476293691283074,0.115884325944855,0.38581844092741,0.412085900803307,0.441596760403192,0,0,0.238436189947321,0,0.470546902076653,0.25384382367503,0.548783918618318,0,0.135804113845862,0,0.355905054372522,0.197008964751127,0,0.154936841185966,0.385813221962283,0.999242311751784,0,0.644613162144895,0,0.220591419119515,0|short_description=p2@Crb2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:241324 | |||
|HGNC= | |||
|MCL_coexpression_id=310 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q80YA8 | |||
|association_with_transcript=32bp_to_ENSMUST00000050372,NM_001163566,uc008jnf.2_5end | |||
|cluster_id=chr2:37631801..37631817,+ | |||
|description=CAGE_peak_2_at_Crb2_5end | |||
|id=chr2:37631801..37631817,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002453,1.45e-12,8;CL:0002319,3.17e-11,43;CL:0000221,7.36e-11,44;CL:0000133,7.36e-11,44;CL:0002609,6.26e-10,6;CL:0000333,9.04e-10,10;CL:0000095,9.04e-10,10;CL:0000243,9.04e-10,10;CL:0000123,9.04e-10,10;CL:0000125,9.04e-10,10;CL:0000030,9.04e-10,10;CL:0000339,9.04e-10,10;CL:0000128,3.40e-09,6;CL:0000126,3.40e-09,6;CL:0000127,3.40e-09,6;CL:0000117,2.09e-08,23;CL:0000337,2.09e-08,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003056!7.26e-11!49;UBERON:0000033!6.72e-10!63;UBERON:0002346!3.23e-09!71;UBERON:0003075!3.23e-09!71;UBERON:0007284!3.23e-09!71;UBERON:0000970!3.49e-08!9;UBERON:0000019!3.49e-08!9;UBERON:0000047!3.49e-08!9;UBERON:0004088!3.49e-08!9;UBERON:0002104!3.49e-08!9;UBERON:0001456!3.49e-08!9;UBERON:0003072!3.49e-08!9;UBERON:0003071!3.49e-08!9;UBERON:0004128!3.49e-08!9;UBERON:0004121!7.07e-07!102;UBERON:0000924!7.07e-07!102;UBERON:0006601!7.07e-07!102;UBERON:0001049!9.56e-07!52;UBERON:0005068!9.56e-07!52;UBERON:0006241!9.56e-07!52;UBERON:0007135!9.56e-07!52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003056,2.39e-24,49;UBERON:0002346,1.47e-18,64;UBERON:0003075,1.47e-18,64;UBERON:0007284,1.47e-18,64;UBERON:0004121,4.22e-18,95;UBERON:0000924,4.22e-18,95;UBERON:0006601,4.22e-18,95;UBERON:0000970,1.32e-17,9;UBERON:0000019,1.32e-17,9;UBERON:0000047,1.32e-17,9;UBERON:0010312,1.32e-17,9;UBERON:0004088,1.32e-17,9;UBERON:0002104,1.32e-17,9;UBERON:0001456,1.32e-17,9;UBERON:0003072,1.32e-17,9;UBERON:0004128,1.32e-17,9;UBERON:0003071,1.32e-17,9;UBERON:0010371,2.59e-15,73;UBERON:0001444,5.15e-14,11;UBERON:0000020,1.14e-12,12;UBERON:0001032,1.14e-12,12;UBERON:0004456,1.14e-12,12;UBERON:0002780,1.26e-12,39;UBERON:0001890,1.26e-12,39;UBERON:0006240,1.26e-12,39;UBERON:0010314,1.35e-12,92;UBERON:0003080,3.45e-12,40;UBERON:0001017,3.70e-12,73;UBERON:0001016,1.20e-11,75;UBERON:0000033,1.56e-11,13;UBERON:0005085,1.56e-11,13;UBERON:0002616,1.91e-11,46;UBERON:0000955,4.31e-11,47;UBERON:0006238,4.31e-11,47;UBERON:0000007,7.62e-11,8;UBERON:0003296,7.62e-11,8;UBERON:0010133,7.62e-11,8;UBERON:0000073,5.25e-10,54;UBERON:0001049,1.54e-09,52;UBERON:0005068,1.54e-09,52;UBERON:0006241,1.54e-09,52;UBERON:0007135,1.54e-09,52;UBERON:0001954,2.10e-09,7;UBERON:0003022,2.10e-09,7;UBERON:0002421,2.10e-09,7;UBERON:0000349,2.10e-09,7;UBERON:0002600,2.10e-09,7;UBERON:0001894,1.96e-08,10;UBERON:0006222,1.96e-08,10 | |||
|phase1_expression=0.160148847104794,0.348975407639361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.3518867285335,13.4008571468028,14.5822424305713,6.01941612989059,8.62515386189829,0,0,0,0,0.286533439938757,1.54701627683233,3.23706337375356,0.528990979272033,1.26766280701236,1.69422266034566,0,0,0,0,2.39680088414724,9.22123932771731,2.38486108309499,1.62007125998029,1.68259969081106,0,0.220868540951614,1.95985278743926,1.43768206527355,2.75765635983006,1.10115880999389,0,0,2.76961204233407,2.37867873366265,2.6045668527838,0,0,0.15279824777681,0,0.569486723196412,0.559198337475902,0,0,0.289864488701678,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0.148442139064825,0.867426633830679,0,0,0,0.352766121407114,0,0.247194967734374,0,0,0,0,0,0,0.292780797011547,0.628340120440365,0,0,0,0,0.299581278809645,0.457500602818626,0.879580464790051,0,0,0.41557608911912,0,1.01839363850316,0,0,2.94618598241064,4.94457683258274,6.20735681970377,5.40186389416048,3.76762044589288,8.70867189136997,4.09963904911519,3.84177070694888,5.95017752699736,0.646703978798527,0,0,0,0,0,0,0.995171334092466,0,0,0,2.48550927042602,0.469052119962192,0.180062061461015,0.710234206755631,0.196764231747404,0.308534225774757,0.232533944750408,0.268273401399619,0.350296027101508,0.16455984991348,0.164167464079095,0,0.146199987425332,0.439100230582101,0,0.841159794256509,2.16099685996497,0,0,1.91959425481711,2.09013004674395,0.515469845288373,0.80673409849337,0.22237804384487,0.380451252225118,0,0,0.502670417600539,0,0,0,0,0,0.379335801906163,1.14248512609729,1.1270773567308,0.610953983535943,0.581857461502877,0.911765658574141,0.379419222745544,0.738050739898011,0.31399745568275,0.123397163921801,0,0.500535317148282,0.196558995113203,0,0.202860121388503,0,0.25462585178142,0,0,0,0,0,0,0,0.179397413521912,0,0.184753190166605,1.13694847062291,0.162964976442026,0.169745085775188,0.234690248288502,0,0.238043640886014,0.195133647857799,0.315270288212382,0,0,0,0,0.144649058581512,0,0,0,0,0.481651769963376,0.234423373184406,0,0,0,0,0,0,0,0,0,0,0,0,0.425820255624806,1.24645922567079,0.81443479676788,0,1.32745138339963,0.242780636154981,0.604647113929502,0.188605079755898,0.590603785761546,0,0.775284879504663,0,0.356497378384721,0.316036757935816,0,2.06271086496374,0.680879211507576,3.6012218806262,3.36332577835162,1.92903331528433,3.3694644392032,2.67553226403106,2.13913726782757,2.74018454203139,0.469343416127421,0,0.220528398054962,0,0.161464426695906,0,0,0,0.291480836629851,0.18542530201051,0,0.619160603889667,0.555583582109135,0,0,0,0,0,0,0,0.949007980743406,0.203319467126849,0.108005340821801,0.209088296014469,0.218362563746178,0.404593039154462,0.0826534557253359,0.523511883968059,0.259229946583586,0,0,1.19613236835183,1.15820943319968,0.583353565032143,0.258319646955462,0.168956125490778,0.117357238645754,0.2604087696879,0,0,0.288030006257865,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0.116876902181569,0,0,0.448569283047378,0,0.579568782096571,0,0.36630324853453,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0.415149390336707,0.798049746802062,1.02440163452481,0.243106717068294,0.209613162627982,0,0.44449345560323,0.206035057238894,0,0,0.50695859978048,0.377252682772152,0.187283014939765,0.128050304809739,0.114870937911227,0.476293691283074,0.115884325944855,0.38581844092741,0.412085900803307,0.441596760403192,0,0,0.238436189947321,0,0.470546902076653,0.25384382367503,0.548783918618318,0,0.135804113845862,0,0.355905054372522,0.197008964751127,0,0.154936841185966,0.385813221962283,0.999242311751784,0,0.644613162144895,0,0.220591419119515,0 | |||
|short_description=p2@Crb2 | |||
}} |
Revision as of 03:44, 5 August 2015
Short description: | p2@Crb2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Crb2_5end |
Coexpression cluster: | MCL_coexpression_mm9:310 |
Association with transcript: | 32bp_to_ENSMUST00000050372, NM_001163566, uc008jnf.2_5end |
EntrezGene: | 241324 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte precursor cell | 1.45e-12 | 8 |
neural cell | 3.17e-11 | 43 |
ectodermal cell | 7.36e-11 | 44 |
neurectodermal cell | 7.36e-11 | 44 |
neuron of cerebral cortex | 6.26e-10 | 6 |
migratory neural crest cell | 9.04e-10 | 10 |
neuron associated cell | 9.04e-10 | 10 |
glial cell (sensu Vertebrata) | 9.04e-10 | 10 |
neuron associated cell (sensu Vertebrata) | 9.04e-10 | 10 |
glial cell | 9.04e-10 | 10 |
glioblast | 9.04e-10 | 10 |
glioblast (sensu Vertebrata) | 9.04e-10 | 10 |
oligodendrocyte | 3.40e-09 | 6 |
macroglial cell | 3.40e-09 | 6 |
astrocyte | 3.40e-09 | 6 |
CNS neuron (sensu Vertebrata) | 2.09e-08 | 23 |
neuroblast (sensu Vertebrata) | 2.09e-08 | 23 |