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FFCP PHASE1:Mm9::chr4:154460687..154460719,+: Difference between revisions

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{{FFCP|EntrezGene=76866|HGNC=|MCL_coexpression_id=1286|UniProt=B1AUE8,B1AUE7,E9Q2M8|association_with_transcript=0bp_to_ENSMUST00000127457,ENSMUST00000155775,ENSMUST00000172149_5end|description=CAGE_peak_1_at_Morn1_5end|id=chr4:154460687..154460719,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!3.07e-18!63;UBERON:0002346!1.77e-15!71;UBERON:0003075!1.77e-15!71;UBERON:0007284!1.77e-15!71;UBERON:0003056!6.01e-15!49;UBERON:0001049!9.13e-15!52;UBERON:0005068!9.13e-15!52;UBERON:0006241!9.13e-15!52;UBERON:0007135!9.13e-15!52;UBERON:0002616!1.03e-14!49;UBERON:0000955!1.16e-14!50;UBERON:0006238!1.16e-14!50;UBERON:0004121!6.37e-14!102;UBERON:0000924!6.37e-14!102;UBERON:0006601!6.37e-14!102;UBERON:0001017!6.14e-13!73;UBERON:0005743!6.14e-13!73;UBERON:0003080!2.20e-12!40;UBERON:0002780!5.16e-12!39;UBERON:0001890!5.16e-12!39;UBERON:0006240!5.16e-12!39;UBERON:0000073!8.98e-12!75;UBERON:0001016!8.98e-12!75;UBERON:0002020!9.66e-08!34;UBERON:0002791!2.72e-07!29;UBERON:0003528!2.72e-07!29;UBERON:0001893!2.72e-07!29;UBERON:0007811!3.30e-07!86;UBERON:0002619!6.40e-07!17;UBERON:0000153!8.64e-07!94|ontology_enrichment_uberon_v019_2=UBERON:0010371,2.08e-16,73;UBERON:0002346,5.25e-16,64;UBERON:0003075,5.25e-16,64;UBERON:0007284,5.25e-16,64;UBERON:0000073,3.48e-15,54;UBERON:0003056,5.95e-15,49;UBERON:0001049,9.04e-15,52;UBERON:0005068,9.04e-15,52;UBERON:0006241,9.04e-15,52;UBERON:0007135,9.04e-15,52;UBERON:0002616,2.76e-14,46;UBERON:0000955,3.14e-14,47;UBERON:0006238,3.14e-14,47;UBERON:0004121,5.40e-14,95;UBERON:0000924,5.40e-14,95;UBERON:0006601,5.40e-14,95;UBERON:0001017,6.09e-13,73;UBERON:0003080,2.18e-12,40;UBERON:0002780,5.12e-12,39;UBERON:0001890,5.12e-12,39;UBERON:0006240,5.12e-12,39;UBERON:0001016,8.91e-12,75;UBERON:0010314,3.41e-10,92;UBERON:0002020,9.61e-08,34;UBERON:0003528,2.70e-07,29;UBERON:0002791,2.70e-07,29;UBERON:0001893,2.70e-07,29;UBERON:0002619,6.38e-07,17|phase1_expression=16.4953312517938,2.44282785347553,3.63999391511629,1.20985684522732,1.50268718983904,2.68606835059024,3.97141489012394,0.903863264091034,0.422366166455,0,0.34243593645101,1.19658238493005,0.513602189793617,0.611942816932982,3.66420737997229,4.45445588257617,2.79824751251259,0.946386496074713,1.91960207048034,2.54633791078818,17.1787446105161,1.68794617041505,1.82839852397255,4.7997726838022,5.04700418347774,2.8711598205751,0,2.37018355954478,2.47030445293286,1.00812051903972,1.10865255327652,15.2407361630311,11.6862309641068,15.8481681015439,4.91047753577167,3.98963148860382,4.69589519403449,0,0,0.523523743973798,0,0,0,0.629484089877886,1.72340783073175,0.734187008646726,5.47673941043627,7.63088047331563,8.34807494390993,7.77719596297134,5.31948402176378,11.5002051491977,1.34226084846189,0.725362142011344,0.672187598284928,1.28629718017973,2.57880095944881,0.515672092277442,5.26022798234954,6.34789175126439,3.80298842103708,1.0165335962074,0.889294796111139,4.94944844504769,2.96659908770092,4.2628806896766,8.38880309451533,28.432154593795,4.25127410464758,3.10513658162888,2.10324961351382,5.42736870367227,7.73039893330647,4.28717797252339,4.12135525378416,6.43453150627015,6.60695285996332,7.78892762319645,4.91540906419979,5.27545150920775,6.31264740856627,5.2091337055676,6.70039197603314,9.56696437053856,9.77908785771585,5.00868595305235,5.83723891276322,6.15118171223492,1.74170244666323,1.96486056277642,11.3047150593654,3.44169550792555,2.03991400112325,7.55584468292944,3.89865850468601,4.48026887097336,4.49422144421606,1.1930122580464,1.29893002301434,3.18005617059306,11.2674735821344,6.41632387071589,2.54805239706646,7.11066703153331,2.38140145112336,3.54703811665138,1.01104889002957,6.05174562511018,1.03575153458869,7.42210695324124,4.51061849591953,3.95805121805784,2.30615497256059,4.82312449768392,6.70255630673517,5.78066320116507,2.96633961281249,4.19338135067744,1.76922110389975,3.88240439873782,4.19598885074748,3.39412677194655,0,10.8328894894272,10.6817820474862,1.78819938646014,1.31796636956512,1.79970819298022,1.39777249780371,8.08869452786043,6.40500843946077,7.16229807043327,10.9509321721134,10.7400492078739,7.89594569326328,10.3834408363365,6.21220119486929,5.97153458928446,8.33985102831127,10.9429765060966,5.59517904739626,4.13823787980251,4.86167750474443,7.23383125611432,9.59314638033723,11.2740073850668,10.6819965998091,15.2634988736019,2.58681591519411,4.16033376369202,5.63043597324636,2.84954452155847,7.22922847986555,5.2237824978325,8.0255033199098,7.56330213910274,0.702213187313235,0.772043721344145,0.568326998791185,3.93538967817454,3.04883877975425,3.6012412292203,2.3674473558521,3.73852040320067,3.08534225774756,3.95307706075693,4.82892122519315,3.38619492864792,2.63295759861569,2.95501435342371,3.64809642956351,3.65499968563331,2.41505126820156,3.48936688776967,11.1453672738987,7.20332286654991,1.65209391491899,2.11560453330835,4.69234151177515,6.0381534683714,3.47942145569652,4.84040459096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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:76866
|HGNC=
|MCL_coexpression_id=1286
|TSSclassifier=NA
|UniProt=uniprot:B1AUE8,uniprot:B1AUE7,uniprot:E9Q2M8
|association_with_transcript=0bp_to_ENSMUST00000127457,ENSMUST00000155775,ENSMUST00000172149_5end
|cluster_id=chr4:154460687..154460719,+
|description=CAGE_peak_1_at_Morn1_5end
|id=chr4:154460687..154460719,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000033!3.07e-18!63;UBERON:0002346!1.77e-15!71;UBERON:0003075!1.77e-15!71;UBERON:0007284!1.77e-15!71;UBERON:0003056!6.01e-15!49;UBERON:0001049!9.13e-15!52;UBERON:0005068!9.13e-15!52;UBERON:0006241!9.13e-15!52;UBERON:0007135!9.13e-15!52;UBERON:0002616!1.03e-14!49;UBERON:0000955!1.16e-14!50;UBERON:0006238!1.16e-14!50;UBERON:0004121!6.37e-14!102;UBERON:0000924!6.37e-14!102;UBERON:0006601!6.37e-14!102;UBERON:0001017!6.14e-13!73;UBERON:0005743!6.14e-13!73;UBERON:0003080!2.20e-12!40;UBERON:0002780!5.16e-12!39;UBERON:0001890!5.16e-12!39;UBERON:0006240!5.16e-12!39;UBERON:0000073!8.98e-12!75;UBERON:0001016!8.98e-12!75;UBERON:0002020!9.66e-08!34;UBERON:0002791!2.72e-07!29;UBERON:0003528!2.72e-07!29;UBERON:0001893!2.72e-07!29;UBERON:0007811!3.30e-07!86;UBERON:0002619!6.40e-07!17;UBERON:0000153!8.64e-07!94
|ontology_enrichment_uberon_v019_2=UBERON:0010371,2.08e-16,73;UBERON:0002346,5.25e-16,64;UBERON:0003075,5.25e-16,64;UBERON:0007284,5.25e-16,64;UBERON:0000073,3.48e-15,54;UBERON:0003056,5.95e-15,49;UBERON:0001049,9.04e-15,52;UBERON:0005068,9.04e-15,52;UBERON:0006241,9.04e-15,52;UBERON:0007135,9.04e-15,52;UBERON:0002616,2.76e-14,46;UBERON:0000955,3.14e-14,47;UBERON:0006238,3.14e-14,47;UBERON:0004121,5.40e-14,95;UBERON:0000924,5.40e-14,95;UBERON:0006601,5.40e-14,95;UBERON:0001017,6.09e-13,73;UBERON:0003080,2.18e-12,40;UBERON:0002780,5.12e-12,39;UBERON:0001890,5.12e-12,39;UBERON:0006240,5.12e-12,39;UBERON:0001016,8.91e-12,75;UBERON:0010314,3.41e-10,92;UBERON:0002020,9.61e-08,34;UBERON:0003528,2.70e-07,29;UBERON:0002791,2.70e-07,29;UBERON:0001893,2.70e-07,29;UBERON:0002619,6.38e-07,17
|phase1_expression=16.4953312517938,2.44282785347553,3.63999391511629,1.20985684522732,1.50268718983904,2.68606835059024,3.97141489012394,0.903863264091034,0.422366166455,0,0.34243593645101,1.19658238493005,0.513602189793617,0.611942816932982,3.66420737997229,4.45445588257617,2.79824751251259,0.946386496074713,1.91960207048034,2.54633791078818,17.1787446105161,1.68794617041505,1.82839852397255,4.7997726838022,5.04700418347774,2.8711598205751,0,2.37018355954478,2.47030445293286,1.00812051903972,1.10865255327652,15.2407361630311,11.6862309641068,15.8481681015439,4.91047753577167,3.98963148860382,4.69589519403449,0,0,0.523523743973798,0,0,0,0.629484089877886,1.72340783073175,0.734187008646726,5.47673941043627,7.63088047331563,8.34807494390993,7.77719596297134,5.31948402176378,11.5002051491977,1.34226084846189,0.725362142011344,0.672187598284928,1.28629718017973,2.57880095944881,0.515672092277442,5.26022798234954,6.34789175126439,3.80298842103708,1.0165335962074,0.889294796111139,4.94944844504769,2.96659908770092,4.2628806896766,8.38880309451533,28.432154593795,4.25127410464758,3.10513658162888,2.10324961351382,5.42736870367227,7.73039893330647,4.28717797252339,4.12135525378416,6.43453150627015,6.60695285996332,7.78892762319645,4.91540906419979,5.27545150920775,6.31264740856627,5.2091337055676,6.70039197603314,9.56696437053856,9.77908785771585,5.00868595305235,5.83723891276322,6.15118171223492,1.74170244666323,1.96486056277642,11.3047150593654,3.44169550792555,2.03991400112325,7.55584468292944,3.89865850468601,4.48026887097336,4.49422144421606,1.1930122580464,1.29893002301434,3.18005617059306,11.2674735821344,6.41632387071589,2.54805239706646,7.11066703153331,2.38140145112336,3.54703811665138,1.01104889002957,6.05174562511018,1.03575153458869,7.42210695324124,4.51061849591953,3.95805121805784,2.30615497256059,4.82312449768392,6.70255630673517,5.78066320116507,2.96633961281249,4.19338135067744,1.76922110389975,3.88240439873782,4.19598885074748,3.39412677194655,0,10.8328894894272,10.6817820474862,1.78819938646014,1.31796636956512,1.79970819298022,1.39777249780371,8.08869452786043,6.40500843946077,7.16229807043327,10.9509321721134,10.7400492078739,7.89594569326328,10.3834408363365,6.21220119486929,5.97153458928446,8.33985102831127,10.9429765060966,5.59517904739626,4.13823787980251,4.86167750474443,7.23383125611432,9.59314638033723,11.2740073850668,10.6819965998091,15.2634988736019,2.58681591519411,4.16033376369202,5.63043597324636,2.84954452155847,7.22922847986555,5.2237824978325,8.0255033199098,7.56330213910274,0.702213187313235,0.772043721344145,0.568326998791185,3.93538967817454,3.04883877975425,3.6012412292203,2.3674473558521,3.73852040320067,3.08534225774756,3.95307706075693,4.82892122519315,3.38619492864792,2.63295759861569,2.95501435342371,3.64809642956351,3.65499968563331,2.41505126820156,3.48936688776967,11.1453672738987,7.20332286654991,1.65209391491899,2.11560453330835,4.69234151177515,6.0381534683714,3.47942145569652,4.84040459096022,4.22518283305254,3.23383564391351,3.32170343081158,3.78807595865225,3.77002813200404,5.37182474511107,4.48417400373976,4.49409704327111,2.59365659849633,4.18196673834171,3.41402221715547,5.25543158004753,4.50830942692322,6.92414514674068,4.65485969202302,7.78507600782536,8.72664212314751,8.11855813887812,5.80895293013087,6.91024117962083,5.92905254174298,1.83529616287703,1.37591296579242,1.57403478669398,2.84004169943904,0.72353147925725,4.07401362850272,3.74004978686054,5.5125977103512,3.29473695825698,0,3.34926852901653,4.36852742360385,2.77836765741823,2.51156378930677,1.4473305640901,8.86815312799702,4.35830247072115,3.7481944581666,5.94107800213158,6.80601720036656,6.53274404023081,8.33152743101048,6.82967767502296,8.19702749352193,8.41565820665345,6.85655505227195,10.1595255123758,6.56202931090403,8.96824163205372,3.01582567878545,3.80733978673097,4.42587845717133,6.89841865761831,8.18808008937739,6.21221938938677,1.47541450839008,5.04941854408746,3.15508219416257,4.29482618726302,2.15423397732799,2.62865677747807,3.7875774594007,1.98153571552183,2.02405350837447,3.79932615284705,2.37172666767914,5.14114106274891,8.23252494207958,5.1639025063504,8.63300884573953,12.2077890999676,3.98235415019888,5.09839335925461,5.13950046840077,3.96070667487386,3.54362271456927,6.14870295887855,8.78656196771952,6.5436071305951,7.84294232446387,5.37262488490887,4.21674434299995,8.25084345985495,11.234506989875,7.92268813737765,8.92574918101006,9.00215547132688,9.75371285032505,12.3074484145429,15.4676079365994,15.8321773539592,1.64270195644597,4.2366414172764,3.74898276693435,4.28704257647848,5.00539722757307,4.28221766989907,3.9392873521035,4.92422699235184,3.78925087618806,5.7481843623258,2.22132145037209,3.50857675537478,3.33350149265481,3.01389531207506,2.05041341581538,2.0590035588587,1.5298058699447,1.95932033253121,2.9021994498929,0.954670618015114,5.852215881251,4.47302827679067,5.07625101862466,7.10900206449194,7.20596460362386,5.12484516262319,5.2898211664215,4.4498510137285,4.66613903850454,3.10669656543463,27.6209539955253,3.88743019714345,4.96375471371293,4.4723773319131,4.64975364519832,6.75824501963113,5.98521917093345,7.94246747548096,8.17902886520545,27.7821738949907,32.8354207133967,1.26404448251271,2.22997736819181,4.31386020092274,2.98817892848929,2.8644271306797,2.58285761215644,2.40390899039938,1.32920574457119,2.1202954489111,2.209997392995,2.62148081355785,1.8516997340553,1.53938946624527,3.74006086981021,6.34845074122592,1.10992976687032,2.06341870201794,3.02192309455341,4.44336066274038,3.00291960721891,6.41030684935428,3.00115730710692,6.52043735245972,7.34177395402186,12.4287813856938,11.4579102687879,11.3423100346834,9.59115527678899,12.8416962556249,8.10027000278167,8.55610286126019,10.4222754066367,10.3552062350364,1.14166082342594,4.38927360741134,4.78054096111576,4.86213434136588,2.30574478890781,3.30918315210025,5.778414922842,6.59312183164461,5.77654577265267,4.54854981174835,8.36481689637791,7.35642731405697,7.02311306024118,7.68301828858431,5.80098236451694,5.71552429539688,6.14186927507734,5.59436739344745,7.00546031365621,7.21274708658547,9.94320831917705,6.92155644021416,5.00715998889374,6.24989591519013,5.27012530325851,6.00763716030903,6.0366231048015,4.73525480588117,7.4692262615224,3.36685362994643,4.62676570684279,5.02372860115374,4.91077251803627,4.95797891795091,7.13754460630223,7.24450676020043,6.31615342802603,6.23126056740065,2.67803664896381,3.08827986767322,2.55054619182464
|short_description=p1@Morn1
}}

Revision as of 06:57, 5 August 2015

Short description:p1@Morn1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Morn1_5end
Coexpression cluster:MCL_coexpression_mm9:1286
Association with transcript: 0bp_to_ENSMUST00000127457, ENSMUST00000155775, ENSMUST00000172149_5end
EntrezGene:76866
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Morn1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G716.50
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I52.44
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I63.64
CD326+ enterocyte, pool1.CNhs13542.11848-124I31.21
CD326+ enterocyte, pool2.CNhs13197.11849-124I41.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I72.69
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I83.97
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.90
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.42
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.34
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F11.20
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.51
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.61
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A13.66
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A34.45
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A52.80
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.95
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A41.92
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A62.55
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A317.18
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H21.69
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I91.83
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D14.80
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D25.05
GP2+ M cell, pool1.CNhs13228.11845-124H92.87
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I22.37
Ileum epithelium, pool1.CNhs13199.10252-104B92.47
Ileum epithelium, pool2.CNhs13232.10253-104C11.01
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C81.11
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I315.24
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G611.69
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F54.91
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F63.99
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F74.70
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.63
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.72
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.73
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B75.48
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C27.63
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B88.35
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C37.78
Mouse Astrocytes, donor2.CNhs12078.11552-120C45.32
Mouse Astrocytes, donor3.CNhs12107.11633-122C411.50
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A21.34
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.73
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.67
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.29
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E12.58
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C35.26
Mouse Granule cells, donor2.CNhs12357.11731-123E36.35
Mouse Granule cells, donor3.CNhs12108.11636-122C73.80
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.02
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C74.95
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E72.97
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D24.26
Mouse Microglia, donor1.CNhs12629.11718-123C88.39
Mouse Microglia, donor2.CNhs12634.11736-123E828.43
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D54.25
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F53.11
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.10
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F15.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D57.73
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D24.29
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F24.12
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D66.43
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D36.61
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F37.79
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D74.92
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D45.28
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F46.31
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D85.21
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E46.70
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E59.57
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I69.78
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D65.01
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F65.84
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E16.15
Mouse Schwann, donor1.CNhs12507.11728-123D91.74
Mouse Schwann, donor2.CNhs12573.11746-123F91.96
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G311.30
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F73.44
Mouse hepatocyte, donor1.CNhs13078.11714-123C42.04
Mouse hepatocyte, donor3.CNhs12615.11637-122C87.56
Mouse hepatocyte, donor6.CNhs13090.11822-124F43.90
Mouse hepatocyte, donor8.CNhs13091.11824-124F64.48
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A74.49
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.19
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.30
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I83.18
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G611.27
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H16.42
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G12.38
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G23.55
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.01
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B66.05
accessory axillary lymph node, adult.CNhs10475.1063-29H91.04
adrenal gland, adult.CNhs10508.49-24D77.42
adrenal gland, embryo E14.CNhs11038.406-44C54.51
adrenal gland, embryo E16.CNhs11004.1254-43D63.96
adrenal gland, embryo E17.CNhs11043.1263-45I12.31
adrenal gland, embryo E18.CNhs11026.1262-18F54.82
adrenal gland, neonate N00.CNhs11191.1311-23C16.70
adrenal gland, neonate N25.CNhs11223.1377-27I35.78
amnion, adult pregnant day17.5.CNhs10488.583-22A82.97
aorta, adult.CNhs10498.46-23H14.19
bone (os femoris), adult.CNhs10483.56-12G21.77
bone (os femoris), neonate N02.CNhs11227.1985-43F53.88
bone (os femoris), neonate N16.CNhs11225.1525-43A64.20
bone (os femoris), neonate N20.CNhs11195.1350-25C33.39
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B210.83
cerebellum, neonate N30.CNhs11135.1395-42I210.68
colon, adult.CNhs10468.36-18H71.79
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C71.32
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.80
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.40
corpora quadrigemina, adult.CNhs10501.16-22A48.09
corpus striatum, adult.CNhs10487.19-21D86.41
corpus striatum, neonate N00.CNhs11226.630-43F17.16
cortex, adult.CNhs10473.12-14D510.95
cortex, neonate N30.CNhs11107.1392-42F210.74
diencephalon, adult.CNhs10482.20-12F27.90
diencephalon, neonate N30.CNhs11201.1388-42B210.38
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B16.21
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A25.97
epididymis, adult.CNhs10490.58-23B28.34
eyeball, adult.CNhs10484.31-12G410.94
eyeball, embryo E12.CNhs11016.345-16C65.60
eyeball, embryo E14.CNhs10521.399-16E24.14
eyeball, embryo E15.CNhs10593.426-16C94.86
eyeball, embryo E17.CNhs11023.1261-18D47.23
eyeball, neonate N00.CNhs11207.633-15C69.59
eyeball, neonate N01.CNhs11140.1532-43E711.27
eyeball, neonate N02.CNhs11205.1551-44G810.68
eyeball, neonate N16.CNhs11188.777-19A215.26
forelimb, embryo E11.CNhs10596.335-25E22.59
forelimb, embryo E12.CNhs10600.359-14H24.16
forelimb, embryo E13.CNhs10589.384-1E25.63
forelimb, embryo E14.CNhs10577.413-26A82.85
forelimb, embryo E15.CNhs11007.437-20E77.23
forelimb, embryo E17.CNhs10598.1517-43C45.22
forelimb, embryo E18.CNhs11008.1520-43B58.03
gonad, embryo E13.CNhs11044.1564-45I67.56
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.77
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.57
heart, embryo E11.CNhs10586.331-24E93.94
heart, embryo E12.CNhs11015.353-12F53.05
heart, embryo E13.CNhs11013.376-3I93.60
heart, embryo E14.CNhs10597.403-26D42.37
heart, embryo E15.CNhs11017.431-16C83.74
heart, embryo E16.CNhs11021.457-17C63.09
heart, embryo E17.CNhs11025.479-18E53.95
heart, embryo E18.CNhs11030.1283-20G34.83
heart, neonate N00.CNhs11213.639-21E33.39
heart, neonate N03.CNhs11221.1349-25I22.63
heart, neonate N10.CNhs11118.749-24G12.96
heart, neonate N16.CNhs11209.782-15G13.65
heart, neonate N20.CNhs11127.821-26I63.65
heart, neonate N25.CNhs11196.1351-25D32.42
heart, neonate N30.CNhs11202.1390-42D23.49
hippocampus, adult.CNhs10478.13-16E811.15
hippocampus, neonate N00.CNhs11228.627-43G17.20
intestinal mucosa, adult.CNhs10506.860-29I31.65
intestine, adult.CNhs10496.178-9A32.12
intestine, embryo E12.CNhs11019.1251-16I54.69
intestine, embryo E13.CNhs11010.381-16D56.04
intestine, embryo E15.CNhs10602.976-16D83.48
intestine, embryo E16.CNhs10585.463-22H44.84
intestine, embryo E17.CNhs10582.482-18D34.23
intestine, embryo E18.CNhs10526.1289-20F73.23
intestine, neonate N00.CNhs11126.644-26D13.32
intestine, neonate N01.CNhs11192.1322-23E93.79
intestine, neonate N06.CNhs11102.688-20B83.77
intestine, neonate N07.CNhs11095.720-20F25.37
intestine, neonate N10.CNhs11098.755-23A54.48
intestine, neonate N20.CNhs11187.827-18D14.49
intestine, neonate N25.CNhs11121.1352-25E32.59
intestine, neonate N30.CNhs11131.1384-42G14.18
kidney, embryo E14.CNhs10606.411-4I93.41
kidney, embryo E15.CNhs10997.434-16F85.26
kidney, embryo E16.CNhs10584.464-22A54.51
kidney, embryo E17.CNhs11028.483-18I26.92
kidney, embryo E18.CNhs11001.1288-20C74.65
kidney, neonate N00.CNhs11214.646-21G77.79
kidney, neonate N10.CNhs11206.758-6D58.73
kidney, neonate N20.CNhs11113.832-19I18.12
kidney, neonate N25.CNhs11122.1353-25F35.81
kidney, neonate N30.CNhs11203.1385-42H16.91
liver, adult pregnant day01.CNhs10466.508-5B25.93
liver, embryo E12.CNhs10601.355-15F81.84
liver, embryo E13.CNhs10524.378-3H61.38
liver, embryo E14.CNhs10594.409-16E11.57
liver, embryo E15.CNhs10520.433-16D72.84
liver, embryo E16.CNhs10523.462-17F50.72
liver, embryo E17.CNhs10510.481-18A34.07
liver, embryo E18.CNhs10579.499-43G43.74
liver, neonate N00.CNhs11117.641-24F45.51
liver, neonate N03.CNhs11123.1345-25G23.29
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H23.35
liver, neonate N10.CNhs11115.751-24B94.37
liver, neonate N20.CNhs11220.823-25A32.78
liver, neonate N25.CNhs11198.1368-26H12.51
liver, neonate N30.CNhs11106.1382-42D11.45
lung, adult.CNhs10474.28-22B18.87
lung, embryo E12.CNhs10522.354-16G24.36
lung, embryo E14.CNhs10604.404-26F83.75
lung, embryo E15.CNhs11020.432-17C55.94
lung, embryo E16.CNhs10998.458-17B66.81
lung, embryo E17.CNhs10605.480-44A66.53
lung, embryo E18.CNhs10583.1287-20I68.33
lung, neonate N00.CNhs11224.640-42C66.83
lung, neonate N06.CNhs11212.683-20E58.20
lung, neonate N07.CNhs11111.715-19A38.42
lung, neonate N10.CNhs11219.750-23E66.86
lung, neonate N20.CNhs11109.822-18A410.16
lung, neonate N25.CNhs11119.1359-25C76.56
lung, neonate N30.CNhs11133.1394-42H28.97
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A13.02
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A13.81
mammary gland, adult lactating day02.CNhs10480.595-22B64.43
mammary gland, adult pregnant day19.CNhs10476.588-5H26.90
medulla oblongata, adult.CNhs10477.17-12C28.19
medulla oblongata, neonate N30.CNhs11200.1396-42A36.21
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C71.48
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C25.05
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E13.16
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E24.29
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E32.15
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D72.63
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D83.79
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.98
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.02
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D53.80
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D62.37
olfactory brain, adult.CNhs10489.18-22I95.14
ovary, adult.CNhs10507.91-2I78.23
ovary, embryo E18.CNhs11040.505-44H75.16
ovary, neonate N00.CNhs11217.1299-22I48.63
oviduct, adult pregnant day01.CNhs10500.988-6G612.21
pancreas, adult.CNhs10486.34-16E43.98
pancreas, embryo E14.CNhs11012.405-44F45.10
pancreas, embryo E15.CNhs11042.1556-45F25.14
pancreas, embryo E16.CNhs11003.460-26E53.96
pancreas, embryo E17.CNhs10599.1558-45G33.54
pancreas, embryo E18.CNhs10580.1535-43I76.15
pancreas, neonate N00.CNhs11105.645-26G98.79
pancreas, neonate N01.CNhs11138.1531-43D76.54
pancreas, neonate N02.CNhs11139.1539-43D87.84
pancreas, neonate N16.CNhs11136.787-43B65.37
pancreas, neonate N25.CNhs11094.1555-45E24.22
pancreas, neonate N30.CNhs11182.1548-44H58.25
pituitary gland, adult.CNhs10493.21-1G811.23
pituitary gland, embryo E12.CNhs11018.346-16E67.92
pituitary gland, embryo E13.CNhs11009.370-44C78.93
pituitary gland, embryo E14.CNhs11037.398-44A59.00
pituitary gland, embryo E15.CNhs10592.427-16B99.75
pituitary gland, embryo E16.CNhs11036.449-43F612.31
pituitary gland, embryo E17.CNhs11039.1265-44F515.47
pituitary gland, neonate N00.CNhs11190.1308-22E915.83
placenta, adult pregnant day10.CNhs10472.539-13I71.64
placenta, adult pregnant day17.CNhs10464.577-18G34.24
prostate, adult.CNhs10470.859-1F83.75
skin, adult.CNhs10492.30-1C34.29
skin, neonate N00.CNhs11124.650-25G45.01
skin, neonate N03.CNhs11215.662-22H34.28
skin, neonate N06.CNhs11097.693-20I53.94
skin, neonate N10.CNhs11108.762-6C44.92
small intestine, neonate N16.CNhs11114.790-21I13.79
spinal cord, adult.CNhs10505.24-13C95.75
spleen, adult.CNhs10465.25-2G22.22
spleen, embryo E16.CNhs11035.461-43C13.51
spleen, embryo E18.CNhs11011.1271-21F23.33
spleen, neonate N10.CNhs11116.752-24D13.01
spleen, neonate N20.CNhs11112.824-19H12.05
spleen, neonate N25.CNhs11099.1354-25G32.06
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.53
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.96
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D32.90
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E35.85
stomach, embryo E15.CNhs10603.1252-16G84.47
stomach, embryo E16.CNhs11022.459-17D45.08
stomach, embryo E17.CNhs11006.1035-18D57.11
stomach, embryo E18.CNhs10999.1286-20C67.21
stomach, neonate N03.CNhs11193.1340-24B85.12
stomach, neonate N07.CNhs11210.718-18A95.29
stomach, neonate N25.CNhs11104.1355-25E44.45
stomach, neonate N30.CNhs11134.1386-42I14.67
submandibular gland, adult.CNhs10469.59-29C13.11
testis, adult.CNhs10504.57-7G527.62
testis, embryo E13.CNhs11031.389-23F53.89
testis, embryo E15.CNhs11034.443-27C54.96
testis, embryo E16.CNhs11033.470-26G54.47
testis, embryo E17.CNhs11029.486-18I54.65
testis, embryo E18.CNhs11027.503-18G56.76
testis, neonate N00.CNhs11189.1300-22B75.99
testis, neonate N07.CNhs11222.726-26I47.94
testis, neonate N10.CNhs11204.763-44D98.18
testis, neonate N20.CNhs11110.839-18H327.78
testis, neonate N30.CNhs11130.1391-42E232.84
thymus, adult.CNhs10471.38-12B51.26
thymus, embryo E14.CNhs11041.402-44I42.23
thymus, embryo E15.CNhs11005.430-45I24.31
thymus, embryo E16.CNhs11002.456-26C52.99
thymus, embryo E17.CNhs10581.478-18C12.86
thymus, embryo E18.CNhs10595.1273-19G42.58
thymus, neonate N02.CNhs11181.1541-43F82.40
thymus, neonate N03.CNhs11137.2104-43C71.33
thymus, neonate N06.CNhs11197.681-26C42.12
thymus, neonate N07.CNhs11211.713-19D32.21
thymus, neonate N10.CNhs11194.748-24E42.62
thymus, neonate N20.CNhs11186.820-7A21.85
thymus, neonate N25.CNhs11125.1362-25G71.54
thymus, neonate N30.CNhs11132.1393-42G23.74
tongue, adult.CNhs10499.32-1B46.35
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H31.11
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F72.06
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G53.02
urinary bladder, adult.CNhs10481.879-12E44.44
uterus, adult pregnant day19.CNhs10497.590-15F53.00
uterus, adult.CNhs10509.92-27E56.41
vagina, adult.CNhs10502.89-27D53.00
vesicular gland, adult.CNhs10491.51-27F86.52
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A17.34
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A212.43
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A311.46
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D711.34
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A49.59
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A512.84
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A68.10
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A78.56
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A810.42
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A910.36
whole body, embryo E11.CNhs11014.324-5I81.14
whole body, embryo E12.CNhs10587.857-27C94.39
whole body, embryo E13.CNhs10512.372-23H24.78
whole body, embryo E14.5.CNhs10578.420-27D24.86
whole body, embryo E14.CNhs10519.395-14B12.31
whole body, embryo E16.CNhs10514.453-14F23.31
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G55.78
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G56.59
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G55.78
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G54.55
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G58.36
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G57.36
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G57.02
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G57.68
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G55.80
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G55.72
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G56.14
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G55.59
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G57.01
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G57.21
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G59.94
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G56.92
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G55.01
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G56.25
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G55.27
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G56.01
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G56.04
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G54.74
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G57.47
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G53.37
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G54.63
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G55.02
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G54.91
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G54.96
whole body, embryo E17.5.CNhs10513.490-9F97.14
whole body, embryo E17.CNhs10517.475-3I57.24
whole body, embryo E18.CNhs10516.493-3B36.32
whole body, neonate N00.CNhs10525.657-19C26.23
whole body, neonate N01.CNhs10576.659-23C62.68
whole body, neonate N06.CNhs10515.692-21D13.09
whole body, neonate N10.CNhs10518.761-6B42.55





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
ecto-epithelium2.08e-1673
neurectoderm5.25e-1664
neural plate5.25e-1664
presumptive neural plate5.25e-1664
regional part of nervous system3.48e-1554
pre-chordal neural plate5.95e-1549
neural tube9.04e-1552
neural rod9.04e-1552
future spinal cord9.04e-1552
neural keel9.04e-1552
regional part of brain2.76e-1446
brain3.14e-1447
future brain3.14e-1447
ectoderm-derived structure5.40e-1495
ectoderm5.40e-1495
presumptive ectoderm5.40e-1495
central nervous system6.09e-1373
anterior neural tube2.18e-1240
regional part of forebrain5.12e-1239
forebrain5.12e-1239
future forebrain5.12e-1239
nervous system8.91e-1275
structure with developmental contribution from neural crest3.41e-1092
gray matter9.61e-0834
brain grey matter2.70e-0729
regional part of telencephalon2.70e-0729
telencephalon2.70e-0729
regional part of cerebral cortex6.38e-0717
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