FFCP PHASE1:Mm9::chr15:62082108..62082111,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr15:62082108..62082111,+ to FFCP PHASE1:Mm9::chr15:62082108..62082111,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=815 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr15:62082108..62082111,+ | |||
|description=CAGE_peak_at_chr15:62082108..62082111,+ | |||
|id=chr15:62082108..62082111,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000192,6.51e-12,3;CL:0000359,6.51e-12,3;CL:0002539,6.51e-12,3;CL:0000514,6.51e-12,3;CL:0000723,3.73e-11,91;CL:0000048,3.73e-11,91;CL:0000034,3.22e-10,97;CL:0000680,4.08e-10,6;CL:0000187,4.08e-10,6;CL:0000056,4.08e-10,6;CL:0000791,6.95e-09,9;CL:0000789,6.95e-09,9;CL:0002420,6.95e-09,9;CL:0002419,6.95e-09,9;CL:0000790,6.95e-09,9;CL:0000222,1.14e-08,7;CL:0000084,3.19e-07,11;CL:0000827,3.19e-07,11;CL:0000624,7.96e-07,8;CL:0002320,9.64e-07,46;CL:0000134,9.64e-07,46;CL:0000355,9.74e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001135,6.51e-12,3;UBERON:0004237,6.51e-12,3;UBERON:0004695,6.51e-12,3;UBERON:0002111,6.51e-12,3;UBERON:0004178,6.51e-12,3;UBERON:0000947,4.96e-09,4;UBERON:0001637,4.96e-09,4;UBERON:0004573,4.96e-09,4;UBERON:0003509,4.96e-09,4;UBERON:0004571,4.96e-09,4;UBERON:0010191,4.96e-09,4;UBERON:0004572,4.96e-09,4;UBERON:0000055,2.71e-07,5;UBERON:0007500,2.71e-07,5;UBERON:0001981,2.71e-07,5;UBERON:0002049,2.71e-07,5;UBERON:0007798,2.71e-07,5;UBERON:0004537,2.71e-07,5;UBERON:0006965,2.71e-07,5;UBERON:0002384,9.64e-07,46;UBERON:0001134,9.74e-07,9;UBERON:0002036,9.74e-07,9;UBERON:0002385,9.74e-07,9;UBERON:0000486,9.74e-07,9;UBERON:0007503,9.74e-07,9;UBERON:0001015,9.74e-07,9;UBERON:0002329,9.74e-07,9;UBERON:0003082,9.74e-07,9;UBERON:0003059,9.74e-07,9;UBERON:0007282,9.74e-07,9;UBERON:0004290,9.74e-07,9;UBERON:0009618,9.74e-07,9 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,1.03298658753261,0.703943610758334,0.936258105287974,1.02730780935303,2.55270908785077,0.171200729931206,2.97229368224591,0.999329285446988,0.607425802169478,0,0.315462165358238,0.548457734422955,0.42438965179803,0.425216450755349,0.198581902401771,0.261199789138935,0,0.22940928106717,0,0,0,0.190023419456374,0,0,0,0.61506478758457,0,0.288851619751275,0.166234645358492,0,0,0,0,0,0,0,8.05739635043695,6.69087746048796,6.60768307782054,0,0.218025156380447,0.219686182734472,0.777719596297134,0.419959264876088,0,0.167782606057736,0.725362142011344,1.00828139742739,0.514518872071894,0.85960031981627,2.57836046138721,0.202316460859598,0.528990979272033,0,0,0,0,1.97773272513395,0,0,0,0,0,0,0.285650984403804,0.441737081903227,0.244981598429908,0,0,0,0.127687338085188,0.153606533256243,0,0,0.52091337055676,0.279182999001381,0.56276261003168,0.30559649555362,1.17851434189467,0.569486723196412,0,0.454357159999104,0.453429360640713,0,0,1.3599426674155,0,0,0,0.140444420131752,1.36344258062446,1.81850203222008,2.12003744706204,0.14084341977668,5.13305909657271,0,0,1.5154372870785,1.01343946190039,0.505524445014783,0.22836775943812,0,0.445326417194474,0.520455980298408,0.304465478312141,0,0.452167921657868,0.352766121407114,0.125666591329675,0.494389935468748,0.144599356919912,0,0.161766849947409,0,0,0,0,0,0.255457055208591,0,0.599902730993408,0,0,0,0.376963056338593,0.347648640384553,0.511430914660661,0.20778804455956,0.324482526135515,0.203678727700633,0,0,0.420883711772948,0,0,0,0.30140963567143,0.136072998302656,0.12811372028485,0,0.258703370739016,0,0,0.351902248327898,0.219195732427575,0.834141747676794,0.348252166522167,0,0,0,0,0.284163499395593,0.207125772535502,0,0.180062061461015,0,0,0.462801338662135,0.232533944750408,0.536546802799238,0,0.16455984991348,1.14917224855367,0.0810688095458557,0.146199987425332,0.658650345873152,0.134206418760372,0.420579897128254,0.205809224758569,0,0,0.213288250535234,0.232236671860439,0.128867461322093,0,0.22237804384487,0,0,0.164698954724011,0,0.596869416123452,0.38992817423824,0,0,0,0,0.456994050438915,0,0.610953983535943,0.387904974335251,0.140271639780637,0.0632365371242573,0,0.156998727841375,0.123397163921801,0,0.166845105716094,0.196558995113203,0.224862112384854,0.202860121388503,0,0.50925170356284,0.287696137450811,1.13494658742525,0.274561413188081,0,0,0.312037673114561,0,0,0.482443521363367,0.184753190166605,0.37898282354097,0.162964976442026,0.848725428875941,0.234690248288502,0,0,0.195133647857799,0.157635144106191,0,0,0.327726629431476,0.172684981865896,0,1.50791283939272,0,0,0.275936746304732,0,0.468846746368813,0.983609672260053,0.252470927204373,0.94652465824877,0.780877488593277,2.15423397732799,0.716906393857656,2.00518806674155,1.13230612315533,0,2.92255857911312,0.395287777946524,0,0.141940085208269,0.178065603667255,0.488660878060728,0.329940245945071,0,0.242780636154981,0.302323556964751,0.377210159511796,0,0.307435147943927,0.258428293168221,0.727067458955011,0.712994756769443,0,0,1.03135543248187,0.340439605753788,0.36012218806262,0,0,0,0,0.329098041204242,0,0,0.42366414172764,0.661585194164886,0,0.161464426695906,0,0.119372344003136,0.328281799490123,0,0.370850604021019,0.512612642393558,0,0.740778109478847,0.188368457004691,0,0,0.169978429993855,0,0,0,0.158167996790568,0.203319467126849,0.108005340821801,0,0.218362563746178,0.134864346384821,0.165306911450672,0,0,0,0.56369293868419,0,0,0.388902376688095,0,0,0,0.13020438484395,0.209718688851422,0,0,0,0,0,0.25984164595559,0,0,0.120195449519969,0,0,0,0.201652370273681,0.0974578807397524,0.288635524920988,0,0.226730383615211,0.443971906748129,0.897138566094757,0.671538465456314,0.579568782096571,0.375364950902364,0.183151624267265,0,0,0,0.460325236507177,0,1.03111909406213,0,0.755393897389701,0.675022500231806,0.900642406448441,0.906284817968409,0,0.103787347584177,0,0,0.243106717068294,0.209613162627982,0,0.222246727801615,0.412070114477788,0.320919209591815,0,0,0.188626341386076,0.187283014939765,0.0640251524048693,0.114870937911227,0,0,0,0,0.147198920134397,0.685738504770831,0.177475806159338,0.476872379894642,0.145346416632329,0.0941093804153306,0.169229215783353,0.182927972872773,0,0,0.561142271657738,0.118635018124174,0.0985044823755635,0.409231043169689,0.154936841185966,0.192906610981141,0,0,0.429742108096597,0,0,0 | |phase1_expression=0.160148847104794,0,0,0,0,0,0,1.03298658753261,0.703943610758334,0.936258105287974,1.02730780935303,2.55270908785077,0.171200729931206,2.97229368224591,0.999329285446988,0.607425802169478,0,0.315462165358238,0.548457734422955,0.42438965179803,0.425216450755349,0.198581902401771,0.261199789138935,0,0.22940928106717,0,0,0,0.190023419456374,0,0,0,0.61506478758457,0,0.288851619751275,0.166234645358492,0,0,0,0,0,0,0,8.05739635043695,6.69087746048796,6.60768307782054,0,0.218025156380447,0.219686182734472,0.777719596297134,0.419959264876088,0,0.167782606057736,0.725362142011344,1.00828139742739,0.514518872071894,0.85960031981627,2.57836046138721,0.202316460859598,0.528990979272033,0,0,0,0,1.97773272513395,0,0,0,0,0,0,0.285650984403804,0.441737081903227,0.244981598429908,0,0,0,0.127687338085188,0.153606533256243,0,0,0.52091337055676,0.279182999001381,0.56276261003168,0.30559649555362,1.17851434189467,0.569486723196412,0,0.454357159999104,0.453429360640713,0,0,1.3599426674155,0,0,0,0.140444420131752,1.36344258062446,1.81850203222008,2.12003744706204,0.14084341977668,5.13305909657271,0,0,1.5154372870785,1.01343946190039,0.505524445014783,0.22836775943812,0,0.445326417194474,0.520455980298408,0.304465478312141,0,0.452167921657868,0.352766121407114,0.125666591329675,0.494389935468748,0.144599356919912,0,0.161766849947409,0,0,0,0,0,0.255457055208591,0,0.599902730993408,0,0,0,0.376963056338593,0.347648640384553,0.511430914660661,0.20778804455956,0.324482526135515,0.203678727700633,0,0,0.420883711772948,0,0,0,0.30140963567143,0.136072998302656,0.12811372028485,0,0.258703370739016,0,0,0.351902248327898,0.219195732427575,0.834141747676794,0.348252166522167,0,0,0,0,0.284163499395593,0.207125772535502,0,0.180062061461015,0,0,0.462801338662135,0.232533944750408,0.536546802799238,0,0.16455984991348,1.14917224855367,0.0810688095458557,0.146199987425332,0.658650345873152,0.134206418760372,0.420579897128254,0.205809224758569,0,0,0.213288250535234,0.232236671860439,0.128867461322093,0,0.22237804384487,0,0,0.164698954724011,0,0.596869416123452,0.38992817423824,0,0,0,0,0.456994050438915,0,0.610953983535943,0.387904974335251,0.140271639780637,0.0632365371242573,0,0.156998727841375,0.123397163921801,0,0.166845105716094,0.196558995113203,0.224862112384854,0.202860121388503,0,0.50925170356284,0.287696137450811,1.13494658742525,0.274561413188081,0,0,0.312037673114561,0,0,0.482443521363367,0.184753190166605,0.37898282354097,0.162964976442026,0.848725428875941,0.234690248288502,0,0,0.195133647857799,0.157635144106191,0,0,0.327726629431476,0.172684981865896,0,1.50791283939272,0,0,0.275936746304732,0,0.468846746368813,0.983609672260053,0.252470927204373,0.94652465824877,0.780877488593277,2.15423397732799,0.716906393857656,2.00518806674155,1.13230612315533,0,2.92255857911312,0.395287777946524,0,0.141940085208269,0.178065603667255,0.488660878060728,0.329940245945071,0,0.242780636154981,0.302323556964751,0.377210159511796,0,0.307435147943927,0.258428293168221,0.727067458955011,0.712994756769443,0,0,1.03135543248187,0.340439605753788,0.36012218806262,0,0,0,0,0.329098041204242,0,0,0.42366414172764,0.661585194164886,0,0.161464426695906,0,0.119372344003136,0.328281799490123,0,0.370850604021019,0.512612642393558,0,0.740778109478847,0.188368457004691,0,0,0.169978429993855,0,0,0,0.158167996790568,0.203319467126849,0.108005340821801,0,0.218362563746178,0.134864346384821,0.165306911450672,0,0,0,0.56369293868419,0,0,0.388902376688095,0,0,0,0.13020438484395,0.209718688851422,0,0,0,0,0,0.25984164595559,0,0,0.120195449519969,0,0,0,0.201652370273681,0.0974578807397524,0.288635524920988,0,0.226730383615211,0.443971906748129,0.897138566094757,0.671538465456314,0.579568782096571,0.375364950902364,0.183151624267265,0,0,0,0.460325236507177,0,1.03111909406213,0,0.755393897389701,0.675022500231806,0.900642406448441,0.906284817968409,0,0.103787347584177,0,0,0.243106717068294,0.209613162627982,0,0.222246727801615,0.412070114477788,0.320919209591815,0,0,0.188626341386076,0.187283014939765,0.0640251524048693,0.114870937911227,0,0,0,0,0.147198920134397,0.685738504770831,0.177475806159338,0.476872379894642,0.145346416632329,0.0941093804153306,0.169229215783353,0.182927972872773,0,0,0.561142271657738,0.118635018124174,0.0985044823755635,0.409231043169689,0.154936841185966,0.192906610981141,0,0,0.429742108096597,0,0,0 | ||
|short_description=p@chr15:62082108..62082111,+ | |||
}} | }} |
Latest revision as of 08:44, 5 August 2015
Short description: | p@chr15:62082108..62082111, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr15:62082108..62082111, + |
Coexpression cluster: | MCL_coexpression_mm9:815 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 6.51e-12 | 3 |
vascular associated smooth muscle cell | 6.51e-12 | 3 |
aortic smooth muscle cell | 6.51e-12 | 3 |
smooth muscle myoblast | 6.51e-12 | 3 |
somatic stem cell | 3.73e-11 | 91 |
multi fate stem cell | 3.73e-11 | 91 |
stem cell | 3.22e-10 | 97 |
muscle precursor cell | 4.08e-10 | 6 |
muscle cell | 4.08e-10 | 6 |
myoblast | 4.08e-10 | 6 |
mature alpha-beta T cell | 6.95e-09 | 9 |
alpha-beta T cell | 6.95e-09 | 9 |
immature T cell | 6.95e-09 | 9 |
mature T cell | 6.95e-09 | 9 |
immature alpha-beta T cell | 6.95e-09 | 9 |
mesodermal cell | 1.14e-08 | 7 |
T cell | 3.19e-07 | 11 |
pro-T cell | 3.19e-07 | 11 |
CD4-positive, alpha-beta T cell | 7.96e-07 | 8 |
connective tissue cell | 9.64e-07 | 46 |
mesenchymal cell | 9.64e-07 | 46 |
multi-potent skeletal muscle stem cell | 9.74e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
smooth muscle tissue | 6.51e-12 | 3 |
blood vessel smooth muscle | 6.51e-12 | 3 |
arterial system smooth muscle | 6.51e-12 | 3 |
artery smooth muscle tissue | 6.51e-12 | 3 |
aorta smooth muscle tissue | 6.51e-12 | 3 |
aorta | 4.96e-09 | 4 |
artery | 4.96e-09 | 4 |
systemic artery | 4.96e-09 | 4 |
arterial blood vessel | 4.96e-09 | 4 |
systemic arterial system | 4.96e-09 | 4 |
aortic system | 4.96e-09 | 4 |
arterial system | 4.96e-09 | 4 |
vessel | 2.71e-07 | 5 |
epithelial tube open at both ends | 2.71e-07 | 5 |
blood vessel | 2.71e-07 | 5 |
vasculature | 2.71e-07 | 5 |
vascular system | 2.71e-07 | 5 |
blood vasculature | 2.71e-07 | 5 |
vascular cord | 2.71e-07 | 5 |
connective tissue | 9.64e-07 | 46 |
skeletal muscle tissue | 9.74e-07 | 9 |
striated muscle tissue | 9.74e-07 | 9 |
muscle tissue | 9.74e-07 | 9 |
multilaminar epithelium | 9.74e-07 | 9 |
epithelial vesicle | 9.74e-07 | 9 |
musculature | 9.74e-07 | 9 |
somite | 9.74e-07 | 9 |
myotome | 9.74e-07 | 9 |
presomitic mesoderm | 9.74e-07 | 9 |
presumptive segmental plate | 9.74e-07 | 9 |
dermomyotome | 9.74e-07 | 9 |
trunk paraxial mesoderm | 9.74e-07 | 9 |