FFCP PHASE1:Mm9::chr6:23201158..23201162,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1824 | |MCL_coexpression_id=1824 | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:23201158..23201162,+ | |||
|description=CAGE_peak_at_chr6:23201158..23201162,+ | |description=CAGE_peak_at_chr6:23201158..23201162,+ | ||
|id=chr6:23201158..23201162,+ | |id=chr6:23201158..23201162,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0002613,9.88e-16,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003056!1.50e-12!49;UBERON:0001894!4.80e-11!10;UBERON:0006222!4.80e-11!10;UBERON:0000007!9.29e-10!8;UBERON:0003296!9.29e-10!8;UBERON:0010133!9.29e-10!8;UBERON:0000033!1.89e-08!63;UBERON:0003080!1.66e-07!40;UBERON:0000970!1.84e-07!9;UBERON:0000019!1.84e-07!9;UBERON:0000047!1.84e-07!9;UBERON:0004088!1.84e-07!9;UBERON:0002104!1.84e-07!9;UBERON:0001456!1.84e-07!9;UBERON:0003072!1.84e-07!9;UBERON:0003071!1.84e-07!9;UBERON:0004128!1.84e-07!9;UBERON:0002780!4.05e-07!39;UBERON:0001890!4.05e-07!39;UBERON:0006240!4.05e-07!39 | |ontology_enrichment_uberon=UBERON:0003056!1.50e-12!49;UBERON:0001894!4.80e-11!10;UBERON:0006222!4.80e-11!10;UBERON:0000007!9.29e-10!8;UBERON:0003296!9.29e-10!8;UBERON:0010133!9.29e-10!8;UBERON:0000033!1.89e-08!63;UBERON:0003080!1.66e-07!40;UBERON:0000970!1.84e-07!9;UBERON:0000019!1.84e-07!9;UBERON:0000047!1.84e-07!9;UBERON:0004088!1.84e-07!9;UBERON:0002104!1.84e-07!9;UBERON:0001456!1.84e-07!9;UBERON:0003072!1.84e-07!9;UBERON:0003071!1.84e-07!9;UBERON:0004128!1.84e-07!9;UBERON:0002780!4.05e-07!39;UBERON:0001890!4.05e-07!39;UBERON:0006240!4.05e-07!39 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000007,6.86e-15,8;UBERON:0003296,6.86e-15,8;UBERON:0010133,6.86e-15,8;UBERON:0003056,3.38e-12,49;UBERON:0001894,6.93e-12,10;UBERON:0006222,6.93e-12,10;UBERON:0002780,7.38e-11,39;UBERON:0001890,7.38e-11,39;UBERON:0006240,7.38e-11,39;UBERON:0003080,1.50e-10,40;UBERON:0002420,6.40e-10,8;UBERON:0007245,6.40e-10,8;UBERON:0010009,6.40e-10,8;UBERON:0010011,6.40e-10,8;UBERON:0000454,6.40e-10,8;UBERON:0000369,1.22e-09,5;UBERON:0002435,1.22e-09,5;UBERON:0000204,1.22e-09,5;UBERON:0010082,1.22e-09,5;UBERON:0002616,5.60e-09,46;UBERON:0002346,6.82e-09,64;UBERON:0003075,6.82e-09,64;UBERON:0007284,6.82e-09,64;UBERON:0000955,9.36e-09,47;UBERON:0006238,9.36e-09,47;UBERON:0001049,9.08e-08,52;UBERON:0005068,9.08e-08,52;UBERON:0006241,9.08e-08,52;UBERON:0007135,9.08e-08,52;UBERON:0010371,1.47e-07,73;UBERON:0000073,2.00e-07,54 | |||
|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,0.17008658030214,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.94429899074283,0,1.43752564364972,0,0,0,0,0.286533439938757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.61245399607477,0.191690942036473,0,0,0,0,5.80299666012853,7.593474419,13.022834263919,0,1.12552522006336,0.15279824777681,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0.259786004602869,0,0.14084341977668,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0,0,0.220841518460394,0,0,0,0,0,0,0,0,0.149790639404823,0,0.376963056338593,0.173824320192276,0.255715457330331,0.62336413367868,0.162241263067758,0,0,0,0.631325567659422,0.910843100738926,0,0.540186389416048,1.35634336052144,0.136072998302656,0.896796041993948,0.468508622798644,2.84573707812917,0,0,0,0,0,0,0,0,0,0,0,0,0.234526059981096,0,0,0,0,0.232533944750408,0,0.116765342367169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159454768657487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238968797952552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.363533729477506,0,0,0,0,0.680879211507576,3.78128297465751,7.76152102696527,6.64444808597936,0.532020700926821,1.60531935841864,1.31639216481697,0.304464949114599,0,0,0,0,0,0,0.119372344003136,0,0,0,0,0,0,0,0,0,0,0,0,1.90934123603023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15241361331,0.100826185136841,0.194915761479505,0,0.233753804363138,0,0,0.179427713218951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.80225838477277,1.99512436700516,2.21953687480374,0.729320151204882,1.25767897576789,0.183843508450014,0.666740183404846,0.824140228955577,0.320919209591815,0.252697211763798,0.25347929989024,0.377252682772152,0.187283014939765,0.320125762024346,0.689225627467359,0,0.231768651889711,0.192909220463705,1.23625770240992,0.294397840268795,0.685738504770831,0.532427418478012,0.476872379894642,0.872078499793971,0.564656282491984,0.592302255241736,0.73171189149109,0.526139422875686,0.543216455383447,0,0.593175090620871,0.197008964751127,0,0.619747364743864,0.771626443924566,0.249810577937946,0.233931608445408,0.429742108096597,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,0.17008658030214,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.94429899074283,0,1.43752564364972,0,0,0,0,0.286533439938757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.61245399607477,0.191690942036473,0,0,0,0,5.80299666012853,7.593474419,13.022834263919,0,1.12552522006336,0.15279824777681,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0.259786004602869,0,0.14084341977668,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0,0,0.220841518460394,0,0,0,0,0,0,0,0,0.149790639404823,0,0.376963056338593,0.173824320192276,0.255715457330331,0.62336413367868,0.162241263067758,0,0,0,0.631325567659422,0.910843100738926,0,0.540186389416048,1.35634336052144,0.136072998302656,0.896796041993948,0.468508622798644,2.84573707812917,0,0,0,0,0,0,0,0,0,0,0,0,0.234526059981096,0,0,0,0,0.232533944750408,0,0.116765342367169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159454768657487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238968797952552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.363533729477506,0,0,0,0,0.680879211507576,3.78128297465751,7.76152102696527,6.64444808597936,0.532020700926821,1.60531935841864,1.31639216481697,0.304464949114599,0,0,0,0,0,0,0.119372344003136,0,0,0,0,0,0,0,0,0,0,0,0,1.90934123603023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15241361331,0.100826185136841,0.194915761479505,0,0.233753804363138,0,0,0.179427713218951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.80225838477277,1.99512436700516,2.21953687480374,0.729320151204882,1.25767897576789,0.183843508450014,0.666740183404846,0.824140228955577,0.320919209591815,0.252697211763798,0.25347929989024,0.377252682772152,0.187283014939765,0.320125762024346,0.689225627467359,0,0.231768651889711,0.192909220463705,1.23625770240992,0.294397840268795,0.685738504770831,0.532427418478012,0.476872379894642,0.872078499793971,0.564656282491984,0.592302255241736,0.73171189149109,0.526139422875686,0.543216455383447,0,0.593175090620871,0.197008964751127,0,0.619747364743864,0.771626443924566,0.249810577937946,0.233931608445408,0.429742108096597,0,0,0 | ||
|short_description=p@chr6:23201158..23201162,+ | |short_description=p@chr6:23201158..23201162,+ | ||
}} | }} |
Latest revision as of 12:06, 5 August 2015
Short description: | p@chr6:23201158..23201162, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:23201158..23201162, + |
Coexpression cluster: | MCL_coexpression_mm9:1824 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
striatum neuron | 9.88e-16 | 3 |
Ontology term | p-value | n |
---|---|---|
pituitary gland | 6.86e-15 | 8 |
gland of diencephalon | 6.86e-15 | 8 |
neuroendocrine gland | 6.86e-15 | 8 |
pre-chordal neural plate | 3.38e-12 | 49 |
diencephalon | 6.93e-12 | 10 |
future diencephalon | 6.93e-12 | 10 |
regional part of forebrain | 7.38e-11 | 39 |
forebrain | 7.38e-11 | 39 |
future forebrain | 7.38e-11 | 39 |
anterior neural tube | 1.50e-10 | 40 |
basal ganglion | 6.40e-10 | 8 |
nuclear complex of neuraxis | 6.40e-10 | 8 |
aggregate regional part of brain | 6.40e-10 | 8 |
collection of basal ganglia | 6.40e-10 | 8 |
cerebral subcortex | 6.40e-10 | 8 |
corpus striatum | 1.22e-09 | 5 |
striatum | 1.22e-09 | 5 |
ventral part of telencephalon | 1.22e-09 | 5 |
future corpus striatum | 1.22e-09 | 5 |
regional part of brain | 5.60e-09 | 46 |
neurectoderm | 6.82e-09 | 64 |
neural plate | 6.82e-09 | 64 |
presumptive neural plate | 6.82e-09 | 64 |
brain | 9.36e-09 | 47 |
future brain | 9.36e-09 | 47 |
neural tube | 9.08e-08 | 52 |
neural rod | 9.08e-08 | 52 |
future spinal cord | 9.08e-08 | 52 |
neural keel | 9.08e-08 | 52 |
ecto-epithelium | 1.47e-07 | 73 |
regional part of nervous system | 2.00e-07 | 54 |