FFCP PHASE1:Mm9::chr7:75420850..75420852,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene= | |EntrezGene= | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=3635 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-28bp_to_ENSMUST00000153805_5end | |association_with_transcript=-28bp_to_ENSMUST00000153805_5end | ||
|cluster_id=chr7:75420850..75420852,+ | |||
|description=CAGE_peak_3_at_ENSMUST00000153805_5end | |description=CAGE_peak_3_at_ENSMUST00000153805_5end | ||
|id=chr7:75420850..75420852,+ | |id=chr7:75420850..75420852,+ | ||
|ontology_enrichment_celltype=CL:0000791!2.76e-14!9;CL:0000789!2.76e-14!9;CL:0002420!2.76e-14!9;CL:0002419!2.76e-14!9;CL:0000790!2.76e-14!9;CL:0000838!9.67e-13!12;CL:0000624!1.51e-12!8;CL:0000542!1.43e-11!13;CL:0000051!1.43e-11!13;CL:0000084!2.65e-11!11;CL:0000827!2.65e-11!11;CL:0000893!1.94e-09!6;CL:0002489!1.94e-09!6;CL:0000898!1.94e-09!6;CL:0000809!1.94e-09!6;CL:0000810!1.94e-09!6;CL:0000895!1.94e-09!6;CL:0000808!1.94e-09!6;CL:0000894!1.94e-09!6;CL:0000806!1.94e-09!6;CL:0000807!1.94e-09!6;CL:0000805!1.94e-09!6;CL:0002425!1.94e-09!6;CL:0002436!1.94e-09!6;CL:0002427!1.94e-09!6;CL:0002428!1.94e-09!6;CL:0002429!1.94e-09!6;CL:0002433!1.94e-09!6;CL:0002431!1.94e-09!6;CL:0002432!1.94e-09!6;CL:0000738!2.78e-08!17;CL:0002087!2.78e-08!17;CL:0002031!3.19e-07!25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,1.98e-11,12;CL:0000542,1.52e-10,13;CL:0000051,1.52e-10,13;CL:0000791,3.28e-10,9;CL:0000789,3.28e-10,9;CL:0002420,3.28e-10,9;CL:0002419,3.28e-10,9;CL:0000790,3.28e-10,9;CL:0000084,2.19e-08,11;CL:0000827,2.19e-08,11;CL:0000738,4.90e-08,17;CL:0002087,4.90e-08,17;CL:0000625,2.75e-07,1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005057!3.06e-28!51;UBERON:0002370!2.70e-26!23;UBERON:0000974!2.70e-26!23;UBERON:0004807!2.70e-26!23;UBERON:0005058!2.70e-26!23;UBERON:0003351!2.70e-26!23;UBERON:0009113!2.70e-26!23;UBERON:0003295!2.70e-26!23;UBERON:0009722!2.70e-26!23;UBERON:0005562!2.70e-26!23;UBERON:0007690!2.70e-26!23;UBERON:0004177!4.93e-26!29;UBERON:0003929!1.63e-25!55;UBERON:0006562!6.05e-25!24;UBERON:0003408!6.05e-25!24;UBERON:0001557!6.05e-25!24;UBERON:0001042!6.05e-25!24;UBERON:0008814!6.05e-25!24;UBERON:0009145!6.05e-25!24;UBERON:0002405!4.79e-24!70;UBERON:0000072!1.69e-21!27;UBERON:0000490!4.12e-21!66;UBERON:0005911!1.00e-19!69;UBERON:0002193!3.84e-19!48;UBERON:0002368!3.56e-18!60;UBERON:0002390!1.80e-17!45;UBERON:0003061!1.80e-17!45;UBERON:0002530!4.04e-16!65;UBERON:0000063!3.16e-15!35;UBERON:0000949!9.80e-14!72;UBERON:0000065!1.90e-13!41;UBERON:0001004!5.50e-13!42;UBERON:0001041!1.89e-12!92;UBERON:0000077!2.43e-11!97;UBERON:0001007!1.21e-10!128;UBERON:0001555!1.21e-10!128;UBERON:0007026!1.21e-10!128;UBERON:0004119!2.54e-10!130;UBERON:0000925!2.54e-10!130;UBERON:0006595!2.54e-10!130;UBERON:0004921!3.13e-10!126;UBERON:0004185!3.13e-10!126;UBERON:0000064!4.11e-08!99;UBERON:0003104!6.52e-08!131;UBERON:0009142!6.52e-08!131;UBERON:0003081!7.29e-08!88;UBERON:0001048!8.36e-07!147 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,8.19e-15,23;UBERON:0000974,8.19e-15,23;UBERON:0004807,8.19e-15,23;UBERON:0005058,8.19e-15,23;UBERON:0003351,8.19e-15,23;UBERON:0009113,8.19e-15,23;UBERON:0003295,8.19e-15,23;UBERON:0009722,8.19e-15,23;UBERON:0005562,8.19e-15,23;UBERON:0007690,8.19e-15,23;UBERON:0006562,3.68e-14,24;UBERON:0003408,3.68e-14,24;UBERON:0001557,3.68e-14,24;UBERON:0001042,3.68e-14,24;UBERON:0008814,3.68e-14,24;UBERON:0009145,3.68e-14,24;UBERON:0000072,1.71e-12,27;UBERON:0004177,1.43e-11,29;UBERON:0005057,1.43e-11,29;UBERON:0003929,8.16e-11,55;UBERON:0002368,8.64e-10,60;UBERON:0000077,1.96e-09,35;UBERON:0007811,3.79e-09,36;UBERON:0002530,6.38e-09,65;UBERON:0000490,9.18e-09,66;UBERON:0002193,1.80e-08,48;UBERON:0002405,1.80e-08,48;UBERON:0005911,2.57e-08,69;UBERON:0000065,6.40e-08,41;UBERON:0000949,6.60e-08,72;UBERON:0001004,1.04e-07,42;UBERON:0000153,1.65e-07,43;UBERON:0000029,3.14e-07,1;UBERON:0001097,3.14e-07,1;UBERON:0003968,3.14e-07,1;UBERON:0001467,3.14e-07,1;UBERON:0002390,3.92e-07,45;UBERON:0003061,3.92e-07,45;UBERON:0001041,5.81e-07,80 | |||
|phase1_expression=0,0.348975407639361,0,0.30246421130683,0,0,0,1.16210991097419,0.703943610758334,0.70219357896598,0.34243593645101,0.319088635981346,1.54080656938085,0.34968160967599,0,0,0,0,0.685572168028694,0.42438965179803,0,0,0,0.159992422793407,0,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0.204169356262369,0,0,0,0,0.683045484958446,0,0,0,0,0,0,0,0,0,0,1.00669563634642,1.45072428402269,2.35265659399725,0,0.286533439938757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29955283489534,1.34408066129201,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0.11418387971906,1.8125651855302,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130120442962704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196764231747404,0,0,0,0,0,0,0,0,0,0,0,0,0.660837565967596,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0632365371242573,0,0.156998727841375,0,0,0,0,0,0,0,0,0.575392274901621,0.162135226775035,0.274561413188081,1.43768206527355,0,0.624075346229121,0.505157755894224,0.538192240565737,0.482443521363367,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.119372344003136,0,0,0,0.170870880797853,0,0,0,0.546776910884101,0.228778173206523,0.169978429993855,0,0.138199973804424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.948033361884535,0.608175645870493,1.23253148597793,1.42912905275575,0.895133478337407,1.78813219303138,1.56254084375959,1.47689527174577,0.807731599585181,0.685861259894999,0.907435666231565,0.682205165178267,1.53938946624527,1.63627663054197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192906610981141,0,0,0,0,0,0 | |phase1_expression=0,0.348975407639361,0,0.30246421130683,0,0,0,1.16210991097419,0.703943610758334,0.70219357896598,0.34243593645101,0.319088635981346,1.54080656938085,0.34968160967599,0,0,0,0,0.685572168028694,0.42438965179803,0,0,0,0.159992422793407,0,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0.204169356262369,0,0,0,0,0.683045484958446,0,0,0,0,0,0,0,0,0,0,1.00669563634642,1.45072428402269,2.35265659399725,0,0.286533439938757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29955283489534,1.34408066129201,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0.11418387971906,1.8125651855302,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130120442962704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196764231747404,0,0,0,0,0,0,0,0,0,0,0,0,0.660837565967596,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0632365371242573,0,0.156998727841375,0,0,0,0,0,0,0,0,0.575392274901621,0.162135226775035,0.274561413188081,1.43768206527355,0,0.624075346229121,0.505157755894224,0.538192240565737,0.482443521363367,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.119372344003136,0,0,0,0.170870880797853,0,0,0,0.546776910884101,0.228778173206523,0.169978429993855,0,0.138199973804424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.948033361884535,0.608175645870493,1.23253148597793,1.42912905275575,0.895133478337407,1.78813219303138,1.56254084375959,1.47689527174577,0.807731599585181,0.685861259894999,0.907435666231565,0.682205165178267,1.53938946624527,1.63627663054197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192906610981141,0,0,0,0,0,0 | ||
|short_description=p3@ENSMUST00000153805 | |short_description=p3@ENSMUST00000153805 | ||
}} | }} |
Latest revision as of 13:04, 5 August 2015
Short description: | p3@ENSMUST00000153805 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_ENSMUST00000153805_5end |
Coexpression cluster: | MCL_coexpression_mm9:3635 |
Association with transcript: | -28bp_to_ENSMUST00000153805_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 1.98e-11 | 12 |
lymphocyte | 1.52e-10 | 13 |
common lymphoid progenitor | 1.52e-10 | 13 |
mature alpha-beta T cell | 3.28e-10 | 9 |
alpha-beta T cell | 3.28e-10 | 9 |
immature T cell | 3.28e-10 | 9 |
mature T cell | 3.28e-10 | 9 |
immature alpha-beta T cell | 3.28e-10 | 9 |
T cell | 2.19e-08 | 11 |
pro-T cell | 2.19e-08 | 11 |
leukocyte | 4.90e-08 | 17 |
nongranular leukocyte | 4.90e-08 | 17 |
CD8-positive, alpha-beta T cell | 2.75e-07 | 1 |