FFCP PHASE1:Mm9::chr18:40701051..40701062,+: Difference between revisions
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|id=chr18:40701051..40701062,+
|short_description=p@chr18:40701051..40701062,+
|description=CAGE_peak_at_chr18:40701051..40701062,+
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr18:40701051..40701062,+ | |||
|description=CAGE_peak_at_chr18:40701051..40701062,+ | |||
|id=chr18:40701051..40701062,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002021!2.92e-22!10;UBERON:0000411!2.92e-22!10;UBERON:0001950!2.92e-22!10;UBERON:0002020!2.26e-19!34;UBERON:0001049!1.16e-18!52;UBERON:0005068!1.16e-18!52;UBERON:0006241!1.16e-18!52;UBERON:0007135!1.16e-18!52;UBERON:0002619!3.58e-17!17;UBERON:0000955!2.22e-16!50;UBERON:0006238!2.22e-16!50;UBERON:0000073!2.87e-16!75;UBERON:0001016!2.87e-16!75;UBERON:0000956!8.61e-16!21;UBERON:0001869!8.61e-16!21;UBERON:0000203!8.61e-16!21;UBERON:0002346!1.12e-15!71;UBERON:0003075!1.12e-15!71;UBERON:0007284!1.12e-15!71;UBERON:0001017!1.45e-15!73;UBERON:0005743!1.45e-15!73;UBERON:0002616!3.76e-15!49;UBERON:0002791!2.45e-14!29;UBERON:0003528!2.45e-14!29;UBERON:0001893!2.45e-14!29;UBERON:0000033!2.61e-14!63;UBERON:0003080!5.43e-14!40;UBERON:0003056!3.44e-13!49;UBERON:0004121!5.12e-13!102;UBERON:0000924!5.12e-13!102;UBERON:0006601!5.12e-13!102;UBERON:0002780!9.55e-13!39;UBERON:0001890!9.55e-13!39;UBERON:0006240!9.55e-13!39;UBERON:0000025!6.96e-09!114;UBERON:0007811!7.17e-09!86;UBERON:0002240!2.35e-08!6;UBERON:0005174!2.35e-08!6;UBERON:0001137!2.35e-08!6;UBERON:0004111!7.54e-08!122;UBERON:0000153!1.27e-07!94;UBERON:0001948!7.91e-07!5;UBERON:0002315!7.91e-07!5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,4.68e-56,10;UBERON:0000411,4.68e-56,10;UBERON:0001950,4.68e-56,10;UBERON:0002619,6.20e-33,17;UBERON:0000956,1.26e-26,21;UBERON:0001869,1.26e-26,21;UBERON:0000203,1.26e-26,21;UBERON:0003528,3.26e-19,29;UBERON:0002791,3.26e-19,29;UBERON:0001893,3.26e-19,29;UBERON:0002020,2.41e-16,34;UBERON:0002780,3.32e-14,39;UBERON:0001890,3.32e-14,39;UBERON:0006240,3.32e-14,39;UBERON:0003080,7.68e-14,40;UBERON:0000073,8.48e-13,54;UBERON:0002616,5.50e-12,46;UBERON:0000955,1.01e-11,47;UBERON:0006238,1.01e-11,47;UBERON:0003056,3.16e-11,49;UBERON:0001049,1.48e-10,52;UBERON:0005068,1.48e-10,52;UBERON:0006241,1.48e-10,52;UBERON:0007135,1.48e-10,52;UBERON:0001851,8.42e-10,1;UBERON:0005889,8.42e-10,1;UBERON:0001017,2.47e-09,73;UBERON:0001016,4.53e-09,75;UBERON:0002346,1.73e-08,64;UBERON:0003075,1.73e-08,64;UBERON:0007284,1.73e-08,64;UBERON:0010371,2.22e-07,73;UBERON:0004121,4.92e-07,95;UBERON:0000924,4.92e-07,95;UBERON:0006601,4.92e-07,95 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0.220868540951614,0,0,0,0,1.0214987046815,0.614426133024974,0,0,0,0,0,0.61119299110724,0.589257170947335,0.427115042397309,0,0,0.151143120213571,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449371918214468,0.457500602818626,0,0.695297280769106,1.02286182932132,0.20778804455956,0.811206315338788,0,0,0,0,0.130120442962704,0,0,0,0.136072998302656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.180062061461015,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0.841159794256509,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221464689648775,0.159454768657487,0,0,0.144649058581512,0,0,0,0,0,0.234423373184406,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168956125490778,0,0.2604087696879,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.25900737046827,0.460325236507177,2.86447756719698,3.95262319390481,2.74033007908257,2.2661816921691,3.37511250115903,0.45032120322422,2.26571204492102,3.10656187051092,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0,0.412085900803307,0,0,0,0.238436189947321,0,0,0,0,0,0,0,0,0.0985044823755635,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0.220868540951614,0,0,0,0,1.0214987046815,0.614426133024974,0,0,0,0,0,0.61119299110724,0.589257170947335,0.427115042397309,0,0,0.151143120213571,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449371918214468,0.457500602818626,0,0.695297280769106,1.02286182932132,0.20778804455956,0.811206315338788,0,0,0,0,0.130120442962704,0,0,0,0.136072998302656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.180062061461015,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0.841159794256509,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221464689648775,0.159454768657487,0,0,0.144649058581512,0,0,0,0,0,0.234423373184406,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168956125490778,0,0.2604087696879,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.25900737046827,0.460325236507177,2.86447756719698,3.95262319390481,2.74033007908257,2.2661816921691,3.37511250115903,0.45032120322422,2.26571204492102,3.10656187051092,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0,0.412085900803307,0,0,0,0.238436189947321,0,0,0,0,0,0,0,0,0.0985044823755635,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr18:40701051..40701062,+ | |||
}} | }} |
Latest revision as of 19:07, 5 August 2015
Short description: | p@chr18:40701051..40701062, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr18:40701051..40701062, + |
Coexpression cluster: | MCL_coexpression_mm9:2 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
occipital lobe | 4.68e-56 | 10 |
visual cortex | 4.68e-56 | 10 |
neocortex | 4.68e-56 | 10 |
regional part of cerebral cortex | 6.20e-33 | 17 |
cerebral cortex | 1.26e-26 | 21 |
cerebral hemisphere | 1.26e-26 | 21 |
pallium | 1.26e-26 | 21 |
brain grey matter | 3.26e-19 | 29 |
regional part of telencephalon | 3.26e-19 | 29 |
telencephalon | 3.26e-19 | 29 |
gray matter | 2.41e-16 | 34 |
regional part of forebrain | 3.32e-14 | 39 |
forebrain | 3.32e-14 | 39 |
future forebrain | 3.32e-14 | 39 |
anterior neural tube | 7.68e-14 | 40 |
regional part of nervous system | 8.48e-13 | 54 |
regional part of brain | 5.50e-12 | 46 |
brain | 1.01e-11 | 47 |
future brain | 1.01e-11 | 47 |
pre-chordal neural plate | 3.16e-11 | 49 |
neural tube | 1.48e-10 | 52 |
neural rod | 1.48e-10 | 52 |
future spinal cord | 1.48e-10 | 52 |
neural keel | 1.48e-10 | 52 |
cortex | 8.42e-10 | 1 |
zygote cortex | 8.42e-10 | 1 |
central nervous system | 2.47e-09 | 73 |
nervous system | 4.53e-09 | 75 |
neurectoderm | 1.73e-08 | 64 |
neural plate | 1.73e-08 | 64 |
presumptive neural plate | 1.73e-08 | 64 |
ecto-epithelium | 2.22e-07 | 73 |
ectoderm-derived structure | 4.92e-07 | 95 |
ectoderm | 4.92e-07 | 95 |
presumptive ectoderm | 4.92e-07 | 95 |