FFCP PHASE1:Mm9::chr6:80124074..80124083,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=135 | |MCL_coexpression_id=135 | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:80124074..80124083,+ | |||
|description=CAGE_peak_at_chr6:80124074..80124083,+ | |description=CAGE_peak_at_chr6:80124074..80124083,+ | ||
|id=chr6:80124074..80124083,+ | |id=chr6:80124074..80124083,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002021!1.98e-38!10;UBERON:0000411!1.98e-38!10;UBERON:0001950!1.98e-38!10;UBERON:0002619!2.28e-26!17;UBERON:0000956!7.84e-25!21;UBERON:0001869!7.84e-25!21;UBERON:0000203!7.84e-25!21;UBERON:0000955!7.67e-22!50;UBERON:0006238!7.67e-22!50;UBERON:0002791!1.61e-20!29;UBERON:0003528!1.61e-20!29;UBERON:0001893!1.61e-20!29;UBERON:0002020!7.21e-20!34;UBERON:0002616!8.95e-20!49;UBERON:0002780!1.10e-19!39;UBERON:0001890!1.10e-19!39;UBERON:0006240!1.10e-19!39;UBERON:0003080!4.03e-19!40;UBERON:0001049!2.71e-18!52;UBERON:0005068!2.71e-18!52;UBERON:0006241!2.71e-18!52;UBERON:0007135!2.71e-18!52;UBERON:0000033!1.18e-16!63;UBERON:0001017!1.17e-15!73;UBERON:0005743!1.17e-15!73;UBERON:0000073!3.78e-15!75;UBERON:0001016!3.78e-15!75;UBERON:0003056!4.33e-15!49;UBERON:0007811!9.65e-13!86;UBERON:0002346!1.50e-12!71;UBERON:0003075!1.50e-12!71;UBERON:0007284!1.50e-12!71;UBERON:0000153!2.33e-11!94;UBERON:0004121!3.27e-10!102;UBERON:0000924!3.27e-10!102;UBERON:0006601!3.27e-10!102;UBERON:0000064!5.53e-07!99 | |ontology_enrichment_uberon=UBERON:0002021!1.98e-38!10;UBERON:0000411!1.98e-38!10;UBERON:0001950!1.98e-38!10;UBERON:0002619!2.28e-26!17;UBERON:0000956!7.84e-25!21;UBERON:0001869!7.84e-25!21;UBERON:0000203!7.84e-25!21;UBERON:0000955!7.67e-22!50;UBERON:0006238!7.67e-22!50;UBERON:0002791!1.61e-20!29;UBERON:0003528!1.61e-20!29;UBERON:0001893!1.61e-20!29;UBERON:0002020!7.21e-20!34;UBERON:0002616!8.95e-20!49;UBERON:0002780!1.10e-19!39;UBERON:0001890!1.10e-19!39;UBERON:0006240!1.10e-19!39;UBERON:0003080!4.03e-19!40;UBERON:0001049!2.71e-18!52;UBERON:0005068!2.71e-18!52;UBERON:0006241!2.71e-18!52;UBERON:0007135!2.71e-18!52;UBERON:0000033!1.18e-16!63;UBERON:0001017!1.17e-15!73;UBERON:0005743!1.17e-15!73;UBERON:0000073!3.78e-15!75;UBERON:0001016!3.78e-15!75;UBERON:0003056!4.33e-15!49;UBERON:0007811!9.65e-13!86;UBERON:0002346!1.50e-12!71;UBERON:0003075!1.50e-12!71;UBERON:0007284!1.50e-12!71;UBERON:0000153!2.33e-11!94;UBERON:0004121!3.27e-10!102;UBERON:0000924!3.27e-10!102;UBERON:0006601!3.27e-10!102;UBERON:0000064!5.53e-07!99 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,1.74e-53,10;UBERON:0000411,1.74e-53,10;UBERON:0001950,1.74e-53,10;UBERON:0002619,1.40e-31,17;UBERON:0000956,1.33e-25,21;UBERON:0001869,1.33e-25,21;UBERON:0000203,1.33e-25,21;UBERON:0003528,1.41e-18,29;UBERON:0002791,1.41e-18,29;UBERON:0001893,1.41e-18,29;UBERON:0002020,7.40e-16,34;UBERON:0002780,7.88e-14,39;UBERON:0001890,7.88e-14,39;UBERON:0006240,7.88e-14,39;UBERON:0003080,1.75e-13,40;UBERON:0000073,5.97e-13,54;UBERON:0002616,1.00e-11,46;UBERON:0000955,1.78e-11,47;UBERON:0006238,1.78e-11,47;UBERON:0003056,5.25e-11,49;UBERON:0001049,2.28e-10,52;UBERON:0005068,2.28e-10,52;UBERON:0006241,2.28e-10,52;UBERON:0007135,2.28e-10,52;UBERON:0001017,1.46e-09,73;UBERON:0001016,2.65e-09,75;UBERON:0002346,2.08e-08,64;UBERON:0003075,2.08e-08,64;UBERON:0007284,2.08e-08,64;UBERON:0010371,2.35e-07,73;UBERON:0004121,2.60e-07,95;UBERON:0000924,2.60e-07,95;UBERON:0006601,2.60e-07,95 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10115880999389,0,0,0,0,0,0,0.56276261003168,0,0,0.142371680799103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209446706813455,0,0,0,0,0,0,0,0.173824320192276,0.255715457330331,0.41557608911912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177340233642274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12950368523413,1.84130094602871,1.14579102687879,4.1244763762485,0.685082519770642,1.5107877947794,2.02506750069542,1.35096360967266,0.453142408984205,0.51776031175182,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0,0,0,0,0,0,0,0,0,0.145346416632329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10115880999389,0,0,0,0,0,0,0.56276261003168,0,0,0.142371680799103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209446706813455,0,0,0,0,0,0,0,0.173824320192276,0.255715457330331,0.41557608911912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177340233642274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12950368523413,1.84130094602871,1.14579102687879,4.1244763762485,0.685082519770642,1.5107877947794,2.02506750069542,1.35096360967266,0.453142408984205,0.51776031175182,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0,0,0,0,0,0,0,0,0,0.145346416632329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr6:80124074..80124083,+ | |short_description=p@chr6:80124074..80124083,+ | ||
}} | }} |
Latest revision as of 03:46, 6 August 2015
Short description: | p@chr6:80124074..80124083, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:80124074..80124083, + |
Coexpression cluster: | MCL_coexpression_mm9:135 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
occipital lobe | 1.74e-53 | 10 |
visual cortex | 1.74e-53 | 10 |
neocortex | 1.74e-53 | 10 |
regional part of cerebral cortex | 1.40e-31 | 17 |
cerebral cortex | 1.33e-25 | 21 |
cerebral hemisphere | 1.33e-25 | 21 |
pallium | 1.33e-25 | 21 |
brain grey matter | 1.41e-18 | 29 |
regional part of telencephalon | 1.41e-18 | 29 |
telencephalon | 1.41e-18 | 29 |
gray matter | 7.40e-16 | 34 |
regional part of forebrain | 7.88e-14 | 39 |
forebrain | 7.88e-14 | 39 |
future forebrain | 7.88e-14 | 39 |
anterior neural tube | 1.75e-13 | 40 |
regional part of nervous system | 5.97e-13 | 54 |
regional part of brain | 1.00e-11 | 46 |
brain | 1.78e-11 | 47 |
future brain | 1.78e-11 | 47 |
pre-chordal neural plate | 5.25e-11 | 49 |
neural tube | 2.28e-10 | 52 |
neural rod | 2.28e-10 | 52 |
future spinal cord | 2.28e-10 | 52 |
neural keel | 2.28e-10 | 52 |
central nervous system | 1.46e-09 | 73 |
nervous system | 2.65e-09 | 75 |
neurectoderm | 2.08e-08 | 64 |
neural plate | 2.08e-08 | 64 |
presumptive neural plate | 2.08e-08 | 64 |
ecto-epithelium | 2.35e-07 | 73 |
ectoderm-derived structure | 2.60e-07 | 95 |
ectoderm | 2.60e-07 | 95 |
presumptive ectoderm | 2.60e-07 | 95 |