FFCP PHASE1:Mm9::chr3:158224703..158224762,-: Difference between revisions
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{{FFCP|EntrezGene=242274|HGNC=|MCL_coexpression_id=1|UniProt=B9EHV0|association_with_transcript=335bp_to_ENSMUST00000168054_5end|description=CAGE_peak_1_at_Lrrc7_5end|id=chr3:158224703..158224762,-|ontology_enrichment_celltype=CL:0000117!5.62e-13!23;CL:0000337!5.62e-13!23;CL:0000540!5.74e-12!33;CL:0000047!5.74e-12!33;CL:0000031!5.74e-12!33;CL:0000404!5.74e-12!33;CL:0000393!7.88e-09!39;CL:0000211!7.88e-09!39;CL:0000221!2.50e-08!44;CL:0000133!2.50e-08!44;CL:0002319!3.07e-08!43|ontology_enrichment_celltype_v019_2=CL:0000117,8.51e-15,23;CL:0000337,8.51e-15,23;CL:0000540,1.72e-12,33;CL:0000047,1.72e-12,33;CL:0000031,1.72e-12,33;CL:0000404,1.72e-12,33;CL:0000393,9.85e-09,39;CL:0000211,9.85e-09,39;CL:0000221,1.40e-08,44;CL:0000133,1.40e-08,44;CL:0002319,1.79e-08,43|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.54e-24!73;UBERON:0005743!1.54e-24!73;UBERON:0000073!3.32e-23!75;UBERON:0001016!3.32e-23!75;UBERON:0001049!4.42e-21!52;UBERON:0005068!4.42e-21!52;UBERON:0006241!4.42e-21!52;UBERON:0007135!4.42e-21!52;UBERON:0000955!1.06e-20!50;UBERON:0006238!1.06e-20!50;UBERON:0000033!3.23e-20!63;UBERON:0002616!6.08e-20!49;UBERON:0003056!1.18e-19!49;UBERON:0002346!5.30e-19!71;UBERON:0003075!5.30e-19!71;UBERON:0007284!5.30e-19!71;UBERON:0003080!1.56e-18!40;UBERON:0004121!3.80e-18!102;UBERON:0000924!3.80e-18!102;UBERON:0006601!3.80e-18!102;UBERON:0002780!5.31e-18!39;UBERON:0001890!5.31e-18!39;UBERON:0006240!5.31e-18!39;UBERON:0002020!7.24e-18!34;UBERON:0002791!2.79e-15!29;UBERON:0003528!2.79e-15!29;UBERON:0001893!2.79e-15!29;UBERON:0000956!5.67e-11!21;UBERON:0001869!5.67e-11!21;UBERON:0000203!5.67e-11!21;UBERON:0002619!5.56e-09!17;UBERON:0002021!2.40e-08!10;UBERON:0000411!2.40e-08!10;UBERON:0001950!2.40e-08!10;UBERON:0007811!1.28e-07!86;UBERON:0000153!1.42e-07!94;UBERON:0000468!1.81e-07!333;UBERON:0001264!1.95e-07!12;UBERON:0003922!1.95e-07!12;UBERON:0002114!1.95e-07!12;UBERON:0003923!1.95e-07!12;UBERON:0003924!1.95e-07!12;UBERON:0003921!1.95e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0001017,5.84e-27,73;UBERON:0000073,8.97e-26,54;UBERON:0001016,1.81e-25,75;UBERON:0002346,2.84e-24,64;UBERON:0003075,2.84e-24,64;UBERON:0007284,2.84e-24,64;UBERON:0001049,6.63e-24,52;UBERON:0005068,6.63e-24,52;UBERON:0006241,6.63e-24,52;UBERON:0007135,6.63e-24,52;UBERON:0003056,6.97e-22,49;UBERON:0003080,3.55e-21,40;UBERON:0000955,3.78e-21,47;UBERON:0006238,3.78e-21,47;UBERON:0004121,4.28e-21,95;UBERON:0000924,4.28e-21,95;UBERON:0006601,4.28e-21,95;UBERON:0002780,1.47e-20,39;UBERON:0001890,1.47e-20,39;UBERON:0006240,1.47e-20,39;UBERON:0002020,2.13e-20,34;UBERON:0002616,2.71e-20,46;UBERON:0010371,1.77e-19,73;UBERON:0003528,2.12e-17,29;UBERON:0002791,2.12e-17,29;UBERON:0001893,2.12e-17,29;UBERON:0000956,2.10e-12,21;UBERON:0001869,2.10e-12,21;UBERON:0000203,2.10e-12,21;UBERON:0010314,1.89e-11,92;UBERON:0002619,4.24e-10,17;UBERON:0002021,1.98e-09,10;UBERON:0000411,1.98e-09,10;UBERON:0001950,1.98e-09,10;UBERON:0001264,2.24e-08,12|phase1_expression=1.12104192973356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0.699561878128147,0,0,0,11.4808441703944,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0,0.194429899074283,0,1.43752564364972,0,0,0,0.257259436035947,0.286533439938757,0.515672092277442,30.5497855897993,28.5655128806898,33.5930643858275,0,0.889294796111139,0,0,0,2.99600110518405,3.84218305321555,27.6851264863635,23.6260392080459,24.1873705554089,20.8525218614777,18.5529574399355,41.1569085362246,32.5874601462004,45.960939330501,69.3730050296149,81.592209036435,68.3549072990283,39.9615451822487,24.793151416253,38.0266760506435,14.7966989470732,21.3849791812038,30.8652460509156,52.7385167997865,28.9014512022179,34.11109858603,0,0.151143120213571,0.579728977403356,0,0,0,0.649776417447669,0,1.12355536105401,0,0,0,3.09855523508697,0,0,0,0,0,0,1.02765491747154,0,0.148442139064825,0.346970653532272,0.608930956624282,0,0.150722640552623,0.352766121407114,0,0,0.144599356919912,0,0.161766849947409,0.220841518460394,0,0,1.46390398505774,4.81727425670947,0.510914110417183,0,0,0,30.8568717173935,176.137732085171,59.9371259578363,78.7424170471012,81.5732308883754,77.2971525761563,104.321132152568,2.13862664085664,0,0.505445516867349,0.631325567659422,9.62891277924007,5.9774547152703,6.66229880279792,5.57607825992146,5.64702942956021,5.38077625196369,5.05989312622536,5.69147415625834,0,3.78212160335639,5.80638709741031,3.72632745126877,5.83899223373756,1.74126083261083,0.823128545631774,2.58744546864041,0,0,0,0.828503090142008,1.40715635988658,0.180062061461015,0.710234206755631,0,0.154267112887378,0.930135779001631,1.07309360559848,0.700592054203017,0,0.164167464079095,0,0,0,0,77.8072809687271,21.8157778244083,2.64335026387038,0.793351699990633,7.89166526980366,11.6118335930219,6.31450560478257,6.25218926332362,3.55804870151792,2.66315876557583,0.474529061544512,2.63518327558417,3.51869292320377,3.18330355265841,3.70431765526328,1.79763881730844,0,0.995706366271836,0.5690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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:242274 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:B9EHV0 | |||
|association_with_transcript=335bp_to_ENSMUST00000168054_5end | |||
|cluster_id=chr3:158224703..158224762,- | |||
|description=CAGE_peak_1_at_Lrrc7_5end | |||
|id=chr3:158224703..158224762,- | |||
|ontology_enrichment_celltype=CL:0000117!5.62e-13!23;CL:0000337!5.62e-13!23;CL:0000540!5.74e-12!33;CL:0000047!5.74e-12!33;CL:0000031!5.74e-12!33;CL:0000404!5.74e-12!33;CL:0000393!7.88e-09!39;CL:0000211!7.88e-09!39;CL:0000221!2.50e-08!44;CL:0000133!2.50e-08!44;CL:0002319!3.07e-08!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,8.51e-15,23;CL:0000337,8.51e-15,23;CL:0000540,1.72e-12,33;CL:0000047,1.72e-12,33;CL:0000031,1.72e-12,33;CL:0000404,1.72e-12,33;CL:0000393,9.85e-09,39;CL:0000211,9.85e-09,39;CL:0000221,1.40e-08,44;CL:0000133,1.40e-08,44;CL:0002319,1.79e-08,43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.54e-24!73;UBERON:0005743!1.54e-24!73;UBERON:0000073!3.32e-23!75;UBERON:0001016!3.32e-23!75;UBERON:0001049!4.42e-21!52;UBERON:0005068!4.42e-21!52;UBERON:0006241!4.42e-21!52;UBERON:0007135!4.42e-21!52;UBERON:0000955!1.06e-20!50;UBERON:0006238!1.06e-20!50;UBERON:0000033!3.23e-20!63;UBERON:0002616!6.08e-20!49;UBERON:0003056!1.18e-19!49;UBERON:0002346!5.30e-19!71;UBERON:0003075!5.30e-19!71;UBERON:0007284!5.30e-19!71;UBERON:0003080!1.56e-18!40;UBERON:0004121!3.80e-18!102;UBERON:0000924!3.80e-18!102;UBERON:0006601!3.80e-18!102;UBERON:0002780!5.31e-18!39;UBERON:0001890!5.31e-18!39;UBERON:0006240!5.31e-18!39;UBERON:0002020!7.24e-18!34;UBERON:0002791!2.79e-15!29;UBERON:0003528!2.79e-15!29;UBERON:0001893!2.79e-15!29;UBERON:0000956!5.67e-11!21;UBERON:0001869!5.67e-11!21;UBERON:0000203!5.67e-11!21;UBERON:0002619!5.56e-09!17;UBERON:0002021!2.40e-08!10;UBERON:0000411!2.40e-08!10;UBERON:0001950!2.40e-08!10;UBERON:0007811!1.28e-07!86;UBERON:0000153!1.42e-07!94;UBERON:0000468!1.81e-07!333;UBERON:0001264!1.95e-07!12;UBERON:0003922!1.95e-07!12;UBERON:0002114!1.95e-07!12;UBERON:0003923!1.95e-07!12;UBERON:0003924!1.95e-07!12;UBERON:0003921!1.95e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,5.84e-27,73;UBERON:0000073,8.97e-26,54;UBERON:0001016,1.81e-25,75;UBERON:0002346,2.84e-24,64;UBERON:0003075,2.84e-24,64;UBERON:0007284,2.84e-24,64;UBERON:0001049,6.63e-24,52;UBERON:0005068,6.63e-24,52;UBERON:0006241,6.63e-24,52;UBERON:0007135,6.63e-24,52;UBERON:0003056,6.97e-22,49;UBERON:0003080,3.55e-21,40;UBERON:0000955,3.78e-21,47;UBERON:0006238,3.78e-21,47;UBERON:0004121,4.28e-21,95;UBERON:0000924,4.28e-21,95;UBERON:0006601,4.28e-21,95;UBERON:0002780,1.47e-20,39;UBERON:0001890,1.47e-20,39;UBERON:0006240,1.47e-20,39;UBERON:0002020,2.13e-20,34;UBERON:0002616,2.71e-20,46;UBERON:0010371,1.77e-19,73;UBERON:0003528,2.12e-17,29;UBERON:0002791,2.12e-17,29;UBERON:0001893,2.12e-17,29;UBERON:0000956,2.10e-12,21;UBERON:0001869,2.10e-12,21;UBERON:0000203,2.10e-12,21;UBERON:0010314,1.89e-11,92;UBERON:0002619,4.24e-10,17;UBERON:0002021,1.98e-09,10;UBERON:0000411,1.98e-09,10;UBERON:0001950,1.98e-09,10;UBERON:0001264,2.24e-08,12 | |||
|phase1_expression=1.12104192973356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0.699561878128147,0,0,0,11.4808441703944,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0,0.194429899074283,0,1.43752564364972,0,0,0,0.257259436035947,0.286533439938757,0.515672092277442,30.5497855897993,28.5655128806898,33.5930643858275,0,0.889294796111139,0,0,0,2.99600110518405,3.84218305321555,27.6851264863635,23.6260392080459,24.1873705554089,20.8525218614777,18.5529574399355,41.1569085362246,32.5874601462004,45.960939330501,69.3730050296149,81.592209036435,68.3549072990283,39.9615451822487,24.793151416253,38.0266760506435,14.7966989470732,21.3849791812038,30.8652460509156,52.7385167997865,28.9014512022179,34.11109858603,0,0.151143120213571,0.579728977403356,0,0,0,0.649776417447669,0,1.12355536105401,0,0,0,3.09855523508697,0,0,0,0,0,0,1.02765491747154,0,0.148442139064825,0.346970653532272,0.608930956624282,0,0.150722640552623,0.352766121407114,0,0,0.144599356919912,0,0.161766849947409,0.220841518460394,0,0,1.46390398505774,4.81727425670947,0.510914110417183,0,0,0,30.8568717173935,176.137732085171,59.9371259578363,78.7424170471012,81.5732308883754,77.2971525761563,104.321132152568,2.13862664085664,0,0.505445516867349,0.631325567659422,9.62891277924007,5.9774547152703,6.66229880279792,5.57607825992146,5.64702942956021,5.38077625196369,5.05989312622536,5.69147415625834,0,3.78212160335639,5.80638709741031,3.72632745126877,5.83899223373756,1.74126083261083,0.823128545631774,2.58744546864041,0,0,0,0.828503090142008,1.40715635988658,0.180062061461015,0.710234206755631,0,0.154267112887378,0.930135779001631,1.07309360559848,0.700592054203017,0,0.164167464079095,0,0,0,0,77.8072809687271,21.8157778244083,2.64335026387038,0.793351699990633,7.89166526980366,11.6118335930219,6.31450560478257,6.25218926332362,3.55804870151792,2.66315876557583,0.474529061544512,2.63518327558417,3.51869292320377,3.18330355265841,3.70431765526328,1.79763881730844,0,0.995706366271836,0.569003702859245,0.571242563048644,1.1270773567308,0.610953983535943,0.387904974335251,1.19230893813542,0.126473074248515,0.147610147979602,0,0,0,0.500535317148282,0.196558995113203,0.449724224769707,0.202860121388503,0.241177159752417,0.25462585178142,0.287696137450811,0.324270453550071,0,0,1.11642284300551,0,0,0.179397413521912,0,0,2.27389694124582,0.325929952884052,1.01847051465113,0,0.167506257441816,0,0.585400943573396,0,0.221464689648775,0,0,0,0,0,0,0,0,13.3256989689867,14.417037450841,0,0,0.631016438832513,3.51394869866975,2.58508077279359,0.955875191810208,2.67358408898873,1.98153571552183,4.04810701674894,2.33804686329049,2.76701444562566,127.885883935879,1.70328102249922,0.534196811001766,1.79175655288934,0.494910368917606,54.4255067193848,9.71122544619926,19.9533547596736,44.510798822392,31.8926044311235,51.034234558692,32.8203932323641,23.9932261455154,32.7977588113944,42.6649623213352,36.8965130012496,46.4109944616841,16.000661470428,5.04171063287669,1.4229455216103,5.5727629108214,12.0591358876746,8.38333442729732,8.22745103010605,4.56697423671899,0,0,0,0.98931751764888,0.484393280087717,0.844380948994182,0.238744688006273,0.164140899745061,1.45740418314925,12.2380699326936,0.170870880797853,2.88941615148511,0.555583582109135,0.188368457004691,0,0,0,0,0,0,12.4952717464548,13.8257237646257,4.96824567780286,3.13632444021703,2.62035076495413,2.42755823492677,1.48776220305605,0.26175594198403,0.388844919875379,0,0,0.448549638131936,0.165458490457098,0,0,0.337912250981556,0.117357238645754,0.39061315453185,0.104859344425711,0,0,0,0,0.308132871494482,0,0,0.198681354781265,0,0,0,0,0,0,0,0,0,0,0,0,8.69353173144857,2.43987218086537,0.36630324853453,0.428736758158132,1.50471631210609,126.504412746223,115.541634363301,112.287520634122,92.1133057362165,112.353533242385,115.575266300624,92.4780825317574,98.1700223028801,94.7067634776988,104.069822662116,0.726511433089237,7.98049746802062,9.56108192223151,11.4260157022098,4.61148957781561,5.69914876195044,8.22312892865976,10.9198580336614,11.5530915453053,9.8551912587881,8.87177549615839,10.3744487762342,6.46126401542189,9.85987347034987,7.58148190214095,13.3362233559261,9.50251472747815,10.9958255664312,7.41754621445952,8.83193520806384,7.88599280486455,5.14679837862079,8.10683045820891,7.84870649814574,7.43464105281112,9.22299226019274,6.40247905054704,5.26139422875686,6.92600980613895,11.2228454331548,10.5585166130515,8.66839444904958,4.50154147486658,8.83139994760006,7.9091710502268,12.2407183189594,7.95367468714389,5.37177635120746,2.48674831689496,0.220591419119515,0.927471342481686 | |||
|short_description=p1@Lrrc7 | |||
}} |
Revision as of 07:03, 6 August 2015
Short description: | p1@Lrrc7 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Lrrc7_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 335bp_to_ENSMUST00000168054_5end |
EntrezGene: | 242274 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 8.51e-15 | 23 |
neuroblast (sensu Vertebrata) | 8.51e-15 | 23 |
neuron | 1.72e-12 | 33 |
neuronal stem cell | 1.72e-12 | 33 |
neuroblast | 1.72e-12 | 33 |
electrically signaling cell | 1.72e-12 | 33 |
electrically responsive cell | 9.85e-09 | 39 |
electrically active cell | 9.85e-09 | 39 |
ectodermal cell | 1.40e-08 | 44 |
neurectodermal cell | 1.40e-08 | 44 |
neural cell | 1.79e-08 | 43 |