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FFCP PHASE1:Mm9::chr3:25435716..25435717,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=NA
|EntrezGene=NA
|HGNC=
|HGNC=
|MCL_coexpression_id=199
|MCL_coexpression_id=199
|TSSclassifier=NA
|UniProt=NA
|UniProt=NA
|association_with_transcript=NA
|association_with_transcript=NA
|cluster_id=chr3:25435716..25435717,-
|description=CAGE_peak_at_chr3:25435716..25435717,-
|description=CAGE_peak_at_chr3:25435716..25435717,-
|id=chr3:25435716..25435717,-
|id=chr3:25435716..25435717,-
|ontology_enrichment_celltype=CL:0000117!1.46e-08!23;CL:0000337!1.46e-08!23;CL:0000540!1.70e-07!33;CL:0000047!1.70e-07!33;CL:0000031!1.70e-07!33;CL:0000404!1.70e-07!33
|ontology_enrichment_celltype=CL:0000117!1.46e-08!23;CL:0000337!1.46e-08!23;CL:0000540!1.70e-07!33;CL:0000047!1.70e-07!33;CL:0000031!1.70e-07!33;CL:0000404!1.70e-07!33
|ontology_enrichment_celltype_v019_2=CL:0000117,6.50e-07,23;CL:0000337,6.50e-07,23
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002346!4.29e-20!71;UBERON:0003075!4.29e-20!71;UBERON:0007284!4.29e-20!71;UBERON:0000033!4.29e-20!63;UBERON:0003056!1.60e-18!49;UBERON:0001049!1.67e-16!52;UBERON:0005068!1.67e-16!52;UBERON:0006241!1.67e-16!52;UBERON:0007135!1.67e-16!52;UBERON:0001017!3.63e-16!73;UBERON:0005743!3.63e-16!73;UBERON:0000955!4.97e-16!50;UBERON:0006238!4.97e-16!50;UBERON:0002616!2.05e-15!49;UBERON:0000073!2.38e-15!75;UBERON:0001016!2.38e-15!75;UBERON:0004121!2.40e-15!102;UBERON:0000924!2.40e-15!102;UBERON:0006601!2.40e-15!102;UBERON:0007811!1.26e-14!86;UBERON:0000153!1.30e-14!94;UBERON:0002020!2.21e-13!34;UBERON:0003080!3.19e-13!40;UBERON:0002780!1.27e-12!39;UBERON:0001890!1.27e-12!39;UBERON:0006240!1.27e-12!39;UBERON:0002791!1.34e-11!29;UBERON:0003528!1.34e-11!29;UBERON:0001893!1.34e-11!29;UBERON:0000956!3.10e-09!21;UBERON:0001869!3.10e-09!21;UBERON:0000203!3.10e-09!21;UBERON:0002021!1.68e-08!10;UBERON:0000411!1.68e-08!10;UBERON:0001950!1.68e-08!10;UBERON:0002619!3.26e-07!17;UBERON:0000468!4.87e-07!333
|ontology_enrichment_uberon=UBERON:0002346!4.29e-20!71;UBERON:0003075!4.29e-20!71;UBERON:0007284!4.29e-20!71;UBERON:0000033!4.29e-20!63;UBERON:0003056!1.60e-18!49;UBERON:0001049!1.67e-16!52;UBERON:0005068!1.67e-16!52;UBERON:0006241!1.67e-16!52;UBERON:0007135!1.67e-16!52;UBERON:0001017!3.63e-16!73;UBERON:0005743!3.63e-16!73;UBERON:0000955!4.97e-16!50;UBERON:0006238!4.97e-16!50;UBERON:0002616!2.05e-15!49;UBERON:0000073!2.38e-15!75;UBERON:0001016!2.38e-15!75;UBERON:0004121!2.40e-15!102;UBERON:0000924!2.40e-15!102;UBERON:0006601!2.40e-15!102;UBERON:0007811!1.26e-14!86;UBERON:0000153!1.30e-14!94;UBERON:0002020!2.21e-13!34;UBERON:0003080!3.19e-13!40;UBERON:0002780!1.27e-12!39;UBERON:0001890!1.27e-12!39;UBERON:0006240!1.27e-12!39;UBERON:0002791!1.34e-11!29;UBERON:0003528!1.34e-11!29;UBERON:0001893!1.34e-11!29;UBERON:0000956!3.10e-09!21;UBERON:0001869!3.10e-09!21;UBERON:0000203!3.10e-09!21;UBERON:0002021!1.68e-08!10;UBERON:0000411!1.68e-08!10;UBERON:0001950!1.68e-08!10;UBERON:0002619!3.26e-07!17;UBERON:0000468!4.87e-07!333
|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.05e-22,64;UBERON:0003075,1.05e-22,64;UBERON:0007284,1.05e-22,64;UBERON:0010371,3.43e-18,73;UBERON:0004121,3.93e-18,95;UBERON:0000924,3.93e-18,95;UBERON:0006601,3.93e-18,95;UBERON:0000073,2.05e-17,54;UBERON:0003056,3.11e-17,49;UBERON:0001017,8.25e-17,73;UBERON:0001049,3.38e-16,52;UBERON:0005068,3.38e-16,52;UBERON:0006241,3.38e-16,52;UBERON:0007135,3.38e-16,52;UBERON:0001016,5.20e-16,75;UBERON:0002020,4.27e-15,34;UBERON:0000955,7.02e-14,47;UBERON:0006238,7.02e-14,47;UBERON:0002021,4.19e-13,10;UBERON:0000411,4.19e-13,10;UBERON:0001950,4.19e-13,10;UBERON:0010314,4.49e-13,92;UBERON:0002616,4.72e-13,46;UBERON:0003528,9.63e-13,29;UBERON:0002791,9.63e-13,29;UBERON:0001893,9.63e-13,29;UBERON:0000956,1.58e-12,21;UBERON:0001869,1.58e-12,21;UBERON:0000203,1.58e-12,21;UBERON:0003080,7.84e-11,40;UBERON:0002780,4.74e-10,39;UBERON:0001890,4.74e-10,39;UBERON:0006240,4.74e-10,39;UBERON:0002619,2.80e-09,17;UBERON:0000970,1.66e-08,9;UBERON:0000019,1.66e-08,9;UBERON:0000047,1.66e-08,9;UBERON:0010312,1.66e-08,9;UBERON:0004088,1.66e-08,9;UBERON:0002104,1.66e-08,9;UBERON:0001456,1.66e-08,9;UBERON:0003072,1.66e-08,9;UBERON:0004128,1.66e-08,9;UBERON:0003071,1.66e-08,9
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,0.850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257259436035947,0,1.03134418455488,0.809265843438391,1.5869729378161,2.53532561402472,0,0,0,0,0,0,0,1.65903379693564,1.62007125998029,2.3135745748652,0.285650984403804,1.54607978666129,0.61245399607477,0.383381884072945,0.919218786610021,1.10115880999389,2.29837208553338,3.22573719838111,0.923204014111357,0.823388792421687,1.04182674111352,0.558365998002762,5.06486349028512,7.02871939773326,7.07108605136802,4.9830088279686,1.1183966749518,0.075726193333184,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0,0,0.346970653532272,0,0.230615497256059,0.150722640552623,1.05829836422134,0,0,0,0,0.323533699894818,0.220841518460394,0.969750506270444,0,7.31951992528868,4.60782754989601,0,0,0,0,6.29120685500255,4.57500602818627,0.502617408451458,12.8629996942285,6.64860189058859,3.74018480207208,6.32740925964255,0.916554274652847,0.497627882440372,0,0.841767423545896,3.12289063110489,5.0578462975364,3.06105620669094,8.89158425230719,15.7164313039567,24.2134931338366,15.3670828277955,2.84573707812917,0.215567992932842,0,0.175951124163949,0.43839146485515,1.94633074457919,1.0447564995665,1.02891068203972,0.995171334092466,0,0,0,0,0.234526059981096,0.180062061461015,0,0.393528463494808,0.462801338662135,0,0.268273401399619,0.233530684734339,0.16455984991348,0,0,0.146199987425332,0,0,8.83217783969334,1.44066457330998,0,0,0.639864751605702,1.39342003116263,0.644337306610467,0.201683524623343,0,0.570676878337677,0,0.164698954724011,0.502670417600539,0.198956472041151,0.779856348476481,0.898819408654221,0,0.398282546508734,0,0.456994050438915,0,1.22190796707189,0.581857461502877,0.420814919341911,0.379419222745544,0.147610147979602,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0.469380496577004,0.167506257441816,0.952174563544055,0.390267295715598,0.472905432318573,0.8858587585951,0.318909537314974,0.163863314715738,0.172684981865896,0,0,0,0,0.275936746304732,4.33486592967038,4.10240903072711,0,0,0.94652465824877,1.56175497718655,0.215423397732799,0,0.222798674082394,0,1.21443210502468,1.75353514746787,0,5.46246237917072,0.425820255624806,0.712262414669021,0.488660878060728,0.824850614862677,0,0,0,0,0,0.307435147943927,0.516856586336442,0.363533729477506,1.06949213515416,0.316036757935816,0,0,0.680879211507576,0.720244376125241,0.129358683782755,0.214337035031592,0.709360934569094,0.713475270408282,0.822745103010605,0.304464949114599,0,0,0,0,0.645857706783622,0.0603129249281559,0,0,0,3.8939313422207,0,0,0.185194527369712,0,0,0,0,0,0,0,0.158167996790568,0,0.756037385752609,0.627264888043406,0,0.539457385539283,0.330613822901344,0,0,0,0,0,0,0,0.387479470433193,1.18269287843545,3.52071715937262,1.3020438484395,0.524296722128554,0,0.288030006257865,0.316011120628178,0,1.1298205288131,0.909445760844565,0.716106782669926,0.596044064343795,0.600977247599844,0.738447635872886,0.201932899896295,0.533447646584999,0.100826185136841,0.292373642219257,0.481059208201647,0.233753804363138,0.226730383615211,0,0,0,0.386379188064381,0.375364950902364,0.915758121336325,0,0.501572104035363,16.3778034358949,10.1271552031579,11.4579102687879,15.2949332285882,8.22099023724771,7.55393897389701,10.8003600037089,6.30449684513909,17.672553950384,7.24864436452548,0.103787347584177,1.19707462020309,3.75613932659095,1.45864030240976,0.209613162627982,0.551530525350042,1.11123363900808,1.23621034343337,1.60459604795908,1.26348605881899,0.760437899670719,1.13175804831646,1.12369808963859,0.704276676453562,1.20614484806788,0.952587382566147,1.50649623728312,1.73618298417335,2.47251540481984,1.03039244094078,3.08582327146874,1.24233064311536,0.953744759789284,1.0174249164263,1.41164070622996,1.4384483341585,2.37806364734604,2.89376682581627,2.03706170768793,1.12228454331548,1.06771516311757,1.37906275325789,0.409231043169689,0.929621047115796,1.92906610981141,0.999242311751784,0.935726433781634,0.644613162144895,1.3390183244819,0.441182838239031,0
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,0.850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257259436035947,0,1.03134418455488,0.809265843438391,1.5869729378161,2.53532561402472,0,0,0,0,0,0,0,1.65903379693564,1.62007125998029,2.3135745748652,0.285650984403804,1.54607978666129,0.61245399607477,0.383381884072945,0.919218786610021,1.10115880999389,2.29837208553338,3.22573719838111,0.923204014111357,0.823388792421687,1.04182674111352,0.558365998002762,5.06486349028512,7.02871939773326,7.07108605136802,4.9830088279686,1.1183966749518,0.075726193333184,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0,0,0.346970653532272,0,0.230615497256059,0.150722640552623,1.05829836422134,0,0,0,0,0.323533699894818,0.220841518460394,0.969750506270444,0,7.31951992528868,4.60782754989601,0,0,0,0,6.29120685500255,4.57500602818627,0.502617408451458,12.8629996942285,6.64860189058859,3.74018480207208,6.32740925964255,0.916554274652847,0.497627882440372,0,0.841767423545896,3.12289063110489,5.0578462975364,3.06105620669094,8.89158425230719,15.7164313039567,24.2134931338366,15.3670828277955,2.84573707812917,0.215567992932842,0,0.175951124163949,0.43839146485515,1.94633074457919,1.0447564995665,1.02891068203972,0.995171334092466,0,0,0,0,0.234526059981096,0.180062061461015,0,0.393528463494808,0.462801338662135,0,0.268273401399619,0.233530684734339,0.16455984991348,0,0,0.146199987425332,0,0,8.83217783969334,1.44066457330998,0,0,0.639864751605702,1.39342003116263,0.644337306610467,0.201683524623343,0,0.570676878337677,0,0.164698954724011,0.502670417600539,0.198956472041151,0.779856348476481,0.898819408654221,0,0.398282546508734,0,0.456994050438915,0,1.22190796707189,0.581857461502877,0.420814919341911,0.379419222745544,0.147610147979602,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0.469380496577004,0.167506257441816,0.952174563544055,0.390267295715598,0.472905432318573,0.8858587585951,0.318909537314974,0.163863314715738,0.172684981865896,0,0,0,0,0.275936746304732,4.33486592967038,4.10240903072711,0,0,0.94652465824877,1.56175497718655,0.215423397732799,0,0.222798674082394,0,1.21443210502468,1.75353514746787,0,5.46246237917072,0.425820255624806,0.712262414669021,0.488660878060728,0.824850614862677,0,0,0,0,0,0.307435147943927,0.516856586336442,0.363533729477506,1.06949213515416,0.316036757935816,0,0,0.680879211507576,0.720244376125241,0.129358683782755,0.214337035031592,0.709360934569094,0.713475270408282,0.822745103010605,0.304464949114599,0,0,0,0,0.645857706783622,0.0603129249281559,0,0,0,3.8939313422207,0,0,0.185194527369712,0,0,0,0,0,0,0,0.158167996790568,0,0.756037385752609,0.627264888043406,0,0.539457385539283,0.330613822901344,0,0,0,0,0,0,0,0.387479470433193,1.18269287843545,3.52071715937262,1.3020438484395,0.524296722128554,0,0.288030006257865,0.316011120628178,0,1.1298205288131,0.909445760844565,0.716106782669926,0.596044064343795,0.600977247599844,0.738447635872886,0.201932899896295,0.533447646584999,0.100826185136841,0.292373642219257,0.481059208201647,0.233753804363138,0.226730383615211,0,0,0,0.386379188064381,0.375364950902364,0.915758121336325,0,0.501572104035363,16.3778034358949,10.1271552031579,11.4579102687879,15.2949332285882,8.22099023724771,7.55393897389701,10.8003600037089,6.30449684513909,17.672553950384,7.24864436452548,0.103787347584177,1.19707462020309,3.75613932659095,1.45864030240976,0.209613162627982,0.551530525350042,1.11123363900808,1.23621034343337,1.60459604795908,1.26348605881899,0.760437899670719,1.13175804831646,1.12369808963859,0.704276676453562,1.20614484806788,0.952587382566147,1.50649623728312,1.73618298417335,2.47251540481984,1.03039244094078,3.08582327146874,1.24233064311536,0.953744759789284,1.0174249164263,1.41164070622996,1.4384483341585,2.37806364734604,2.89376682581627,2.03706170768793,1.12228454331548,1.06771516311757,1.37906275325789,0.409231043169689,0.929621047115796,1.92906610981141,0.999242311751784,0.935726433781634,0.644613162144895,1.3390183244819,0.441182838239031,0
|short_description=p@chr3:25435716..25435717,-
|short_description=p@chr3:25435716..25435717,-
}}
}}

Latest revision as of 07:57, 6 August 2015

Short description:p@chr3:25435716..25435717, -
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_at_chr3:25435716..25435717, -
Coexpression cluster:MCL_coexpression_mm9:199
Association with transcript: NA
EntrezGene:NA
Link to Zenbu:ZENBU


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Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p@chr3:25435716..25435717-

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.32
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.85
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.03
Mouse Granule cells, donor1.CNhs12131.11713-123C30.81
Mouse Granule cells, donor2.CNhs12357.11731-123E31.59
Mouse Granule cells, donor3.CNhs12108.11636-122C72.54
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.66
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.62
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.31
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.55
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.61
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.38
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.30
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D73.23
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.92
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.82
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.04
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.56
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E55.06
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I67.03
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D67.07
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F64.98
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.12
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C11.06
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.97
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B27.32
cerebellum, neonate N30.CNhs11135.1395-42I24.61
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A46.29
corpus striatum, adult.CNhs10487.19-21D84.58
corpus striatum, neonate N00.CNhs11226.630-43F10.50
cortex, adult.CNhs10473.12-14D512.86
cortex, neonate N30.CNhs11107.1392-42F26.65
diencephalon, adult.CNhs10482.20-12F23.74
diencephalon, neonate N30.CNhs11201.1388-42B26.33
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.92
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.50
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.84
eyeball, embryo E12.CNhs11016.345-16C63.12
eyeball, embryo E14.CNhs10521.399-16E25.06
eyeball, embryo E15.CNhs10593.426-16C93.06
eyeball, embryo E17.CNhs11023.1261-18D48.89
eyeball, neonate N00.CNhs11207.633-15C615.72
eyeball, neonate N01.CNhs11140.1532-43E724.21
eyeball, neonate N02.CNhs11205.1551-44G815.37
eyeball, neonate N16.CNhs11188.777-19A22.85
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E71.95
forelimb, embryo E17.CNhs10598.1517-43C41.04
forelimb, embryo E18.CNhs11008.1520-43B51.03
gonad, embryo E13.CNhs11044.1564-45I61.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C60.46
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.23
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E88.83
hippocampus, neonate N00.CNhs11228.627-43G11.44
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.64
intestine, embryo E13.CNhs11010.381-16D51.39
intestine, embryo E15.CNhs10602.976-16D80.64
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.57
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.78
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.40
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.46
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I21.22
kidney, embryo E18.CNhs11001.1288-20C70.58
kidney, neonate N00.CNhs11214.646-21G70.42
kidney, neonate N10.CNhs11206.758-6D50.38
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.95
lung, neonate N00.CNhs11224.640-42C60.39
lung, neonate N06.CNhs11212.683-20E50.47
lung, neonate N07.CNhs11111.715-19A30.89
lung, neonate N10.CNhs11219.750-23E60.32
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C24.33
medulla oblongata, neonate N30.CNhs11200.1396-42A34.10
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.95
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.56
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.21
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.75
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I95.46
ovary, adult.CNhs10507.91-2I70.43
ovary, embryo E18.CNhs11040.505-44H70.71
ovary, neonate N00.CNhs11217.1299-22I40.49
oviduct, adult pregnant day01.CNhs10500.988-6G60.82
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D81.07
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.68
pituitary gland, embryo E12.CNhs11018.346-16E60.72
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.71
pituitary gland, embryo E16.CNhs11036.449-43F60.71
pituitary gland, embryo E17.CNhs11039.1265-44F50.82
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.65
skin, neonate N03.CNhs11215.662-22H30.06
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C93.89
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.76
stomach, embryo E17.CNhs11006.1035-18D50.63
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.54
stomach, neonate N07.CNhs11210.718-18A90.33
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.39
testis, embryo E18.CNhs11027.503-18G51.18
testis, neonate N00.CNhs11189.1300-22B73.52
testis, neonate N07.CNhs11222.726-26I41.30
testis, neonate N10.CNhs11204.763-44D90.52
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I21.13
thymus, embryo E16.CNhs11002.456-26C50.91
thymus, embryo E17.CNhs10581.478-18C10.72
thymus, embryo E18.CNhs10595.1273-19G40.60
thymus, neonate N02.CNhs11181.1541-43F80.60
thymus, neonate N03.CNhs11137.2104-43C70.74
thymus, neonate N06.CNhs11197.681-26C40.20
thymus, neonate N07.CNhs11211.713-19D30.53
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.29
thymus, neonate N25.CNhs11125.1362-25G70.48
thymus, neonate N30.CNhs11132.1393-42G20.23
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F50.38
uterus, adult.CNhs10509.92-27E50.92
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A116.38
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A210.13
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A311.46
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D715.29
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A48.22
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A57.55
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A610.80
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A76.30
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A817.67
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A97.25
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C91.20
whole body, embryo E13.CNhs10512.372-23H23.76
whole body, embryo E14.5.CNhs10578.420-27D21.46
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.55
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.26
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.13
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.70
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.21
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.51
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.74
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.47
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G53.09
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.02
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.41
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.44
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.89
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.04
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.07
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.38
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.93
whole body, embryo E17.5.CNhs10513.490-9F91.93
whole body, embryo E17.CNhs10517.475-3I51.00
whole body, embryo E18.CNhs10516.493-3B30.94
whole body, neonate N00.CNhs10525.657-19C20.64
whole body, neonate N01.CNhs10576.659-23C61.34
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)6.50e-0723
neuroblast (sensu Vertebrata)6.50e-0723

Uber anatomy
Ontology termp-valuen
neurectoderm1.05e-2264
neural plate1.05e-2264
presumptive neural plate1.05e-2264
ecto-epithelium3.43e-1873
ectoderm-derived structure3.93e-1895
ectoderm3.93e-1895
presumptive ectoderm3.93e-1895
regional part of nervous system2.05e-1754
pre-chordal neural plate3.11e-1749
central nervous system8.25e-1773
neural tube3.38e-1652
neural rod3.38e-1652
future spinal cord3.38e-1652
neural keel3.38e-1652
nervous system5.20e-1675
gray matter4.27e-1534
brain7.02e-1447
future brain7.02e-1447
occipital lobe4.19e-1310
visual cortex4.19e-1310
neocortex4.19e-1310
structure with developmental contribution from neural crest4.49e-1392
regional part of brain4.72e-1346
brain grey matter9.63e-1329
regional part of telencephalon9.63e-1329
telencephalon9.63e-1329
cerebral cortex1.58e-1221
cerebral hemisphere1.58e-1221
pallium1.58e-1221
anterior neural tube7.84e-1140
regional part of forebrain4.74e-1039
forebrain4.74e-1039
future forebrain4.74e-1039
regional part of cerebral cortex2.80e-0917
eye1.66e-089
camera-type eye1.66e-089
simple eye1.66e-089
immature eye1.66e-089
ocular region1.66e-089
visual system1.66e-089
face1.66e-089
optic cup1.66e-089
optic vesicle1.66e-089
eye primordium1.66e-089
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