FFCP PHASE1:Mm9::chrX:7229928..7229937,-: Difference between revisions
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|id=chrX:7229928..7229937,-
|short_description=p@chrX:7229928..7229937,-
|description=CAGE_peak_at_chrX:7229928..7229937,-
|association_with_transcript=NA
|EntrezG...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=135 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chrX:7229928..7229937,- | |||
|description=CAGE_peak_at_chrX:7229928..7229937,- | |||
|id=chrX:7229928..7229937,- | |||
|ontology_enrichment_celltype=CL:0000117!7.09e-15!23;CL:0000337!7.09e-15!23;CL:0000540!2.98e-09!33;CL:0000047!2.98e-09!33;CL:0000031!2.98e-09!33;CL:0000404!2.98e-09!33;CL:0000221!3.34e-08!44;CL:0000133!3.34e-08!44;CL:0002319!1.95e-07!43;CL:0000393!2.72e-07!39;CL:0000211!2.72e-07!39 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!2.10e-25!34;UBERON:0001017!4.30e-25!73;UBERON:0005743!4.30e-25!73;UBERON:0002346!9.61e-25!71;UBERON:0003075!9.61e-25!71;UBERON:0007284!9.61e-25!71;UBERON:0001049!1.22e-24!52;UBERON:0005068!1.22e-24!52;UBERON:0006241!1.22e-24!52;UBERON:0007135!1.22e-24!52;UBERON:0000955!2.75e-24!50;UBERON:0006238!2.75e-24!50;UBERON:0004121!3.21e-24!102;UBERON:0000924!3.21e-24!102;UBERON:0006601!3.21e-24!102;UBERON:0000073!3.50e-24!75;UBERON:0001016!3.50e-24!75;UBERON:0000033!6.93e-24!63;UBERON:0002616!8.13e-23!49;UBERON:0002791!1.51e-20!29;UBERON:0003528!1.51e-20!29;UBERON:0001893!1.51e-20!29;UBERON:0002021!1.89e-20!10;UBERON:0000411!1.89e-20!10;UBERON:0001950!1.89e-20!10;UBERON:0003056!1.08e-18!49;UBERON:0000956!1.08e-18!21;UBERON:0001869!1.08e-18!21;UBERON:0000203!1.08e-18!21;UBERON:0003080!1.09e-18!40;UBERON:0002780!2.55e-17!39;UBERON:0001890!2.55e-17!39;UBERON:0006240!2.55e-17!39;UBERON:0007811!2.06e-16!86;UBERON:0002619!1.17e-15!17;UBERON:0000153!2.66e-14!94;UBERON:0002298!7.06e-08!6;UBERON:0002240!1.18e-07!6;UBERON:0005174!1.18e-07!6;UBERON:0001137!1.18e-07!6;UBERON:0000025!3.34e-07!114;UBERON:0004111!6.46e-07!122 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,7.05e-47,10;UBERON:0000411,7.05e-47,10;UBERON:0001950,7.05e-47,10;UBERON:0002619,2.03e-27,17;UBERON:0000956,4.15e-22,21;UBERON:0001869,4.15e-22,21;UBERON:0000203,4.15e-22,21;UBERON:0003528,4.82e-20,29;UBERON:0002791,4.82e-20,29;UBERON:0001893,4.82e-20,29;UBERON:0002020,5.35e-17,34;UBERON:0002780,9.94e-15,39;UBERON:0001890,9.94e-15,39;UBERON:0006240,9.94e-15,39;UBERON:0003080,2.42e-14,40;UBERON:0001017,1.35e-13,73;UBERON:0001016,3.30e-13,75;UBERON:0000073,6.89e-13,54;UBERON:0002616,2.24e-12,46;UBERON:0000955,4.27e-12,47;UBERON:0006238,4.27e-12,47;UBERON:0003056,1.43e-11,49;UBERON:0001049,7.38e-11,52;UBERON:0005068,7.38e-11,52;UBERON:0006241,7.38e-11,52;UBERON:0007135,7.38e-11,52;UBERON:0004121,3.22e-10,95;UBERON:0000924,3.22e-10,95;UBERON:0006601,3.22e-10,95;UBERON:0002346,1.14e-08,64;UBERON:0003075,1.14e-08,64;UBERON:0007284,1.14e-08,64;UBERON:0010371,1.71e-07,73 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43752564364972,0,0,0,0,0,0,0,1.05798195854407,0,0,0,0,0,0,0,0,0,0.135005938331691,0.210324961351382,0.285650984403804,0.883474163806454,0.244981598429908,0,0,1.10115880999389,0.638436690425939,0.307213066512487,0.131886287730194,0.182975287204819,0,0.558365998002762,0,1.68078072554491,0.294628585473668,0,0.186399445825301,0,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0,0.304465478312141,0,0.150722640552623,0,0.125666591329675,0,0,0,0,0,0,0,0,0,0,0,0,0,0.748953197024114,0,0,0.347648640384553,0,0.20778804455956,0,0,0,0,0,0,0,0,0,0.0680364991513279,0,0.0937017245597288,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420579897128254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321101179975584,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0.963963949265421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214337035031592,0,0,0,0,0,0.21183207086382,0,0,0,0,0,0,0,0.556275906031529,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0,2.25900737046827,1.84130094602871,0.572895513439397,3.95262319390481,2.05524755931193,1.5107877947794,4.72515750162264,1.80128481289688,0.906284817968409,1.03552062350364,0,0,0.170733605754134,0,0,0,0.44449345560323,0,0,0,0,0,0,0,0.0574354689556133,0,0,0.192909220463705,0,0,0,0.177475806159338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43752564364972,0,0,0,0,0,0,0,1.05798195854407,0,0,0,0,0,0,0,0,0,0.135005938331691,0.210324961351382,0.285650984403804,0.883474163806454,0.244981598429908,0,0,1.10115880999389,0.638436690425939,0.307213066512487,0.131886287730194,0.182975287204819,0,0.558365998002762,0,1.68078072554491,0.294628585473668,0,0.186399445825301,0,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0,0.304465478312141,0,0.150722640552623,0,0.125666591329675,0,0,0,0,0,0,0,0,0,0,0,0,0,0.748953197024114,0,0,0.347648640384553,0,0.20778804455956,0,0,0,0,0,0,0,0,0,0.0680364991513279,0,0.0937017245597288,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420579897128254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321101179975584,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0.963963949265421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214337035031592,0,0,0,0,0,0.21183207086382,0,0,0,0,0,0,0,0.556275906031529,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0,2.25900737046827,1.84130094602871,0.572895513439397,3.95262319390481,2.05524755931193,1.5107877947794,4.72515750162264,1.80128481289688,0.906284817968409,1.03552062350364,0,0,0.170733605754134,0,0,0,0.44449345560323,0,0,0,0,0,0,0,0.0574354689556133,0,0,0.192909220463705,0,0,0,0.177475806159338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chrX:7229928..7229937,- | |||
}} | }} |
Latest revision as of 10:37, 6 August 2015
Short description: | p@chrX:7229928..7229937, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chrX:7229928..7229937, - |
Coexpression cluster: | MCL_coexpression_mm9:135 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
occipital lobe | 7.05e-47 | 10 |
visual cortex | 7.05e-47 | 10 |
neocortex | 7.05e-47 | 10 |
regional part of cerebral cortex | 2.03e-27 | 17 |
cerebral cortex | 4.15e-22 | 21 |
cerebral hemisphere | 4.15e-22 | 21 |
pallium | 4.15e-22 | 21 |
brain grey matter | 4.82e-20 | 29 |
regional part of telencephalon | 4.82e-20 | 29 |
telencephalon | 4.82e-20 | 29 |
gray matter | 5.35e-17 | 34 |
regional part of forebrain | 9.94e-15 | 39 |
forebrain | 9.94e-15 | 39 |
future forebrain | 9.94e-15 | 39 |
anterior neural tube | 2.42e-14 | 40 |
central nervous system | 1.35e-13 | 73 |
nervous system | 3.30e-13 | 75 |
regional part of nervous system | 6.89e-13 | 54 |
regional part of brain | 2.24e-12 | 46 |
brain | 4.27e-12 | 47 |
future brain | 4.27e-12 | 47 |
pre-chordal neural plate | 1.43e-11 | 49 |
neural tube | 7.38e-11 | 52 |
neural rod | 7.38e-11 | 52 |
future spinal cord | 7.38e-11 | 52 |
neural keel | 7.38e-11 | 52 |
ectoderm-derived structure | 3.22e-10 | 95 |
ectoderm | 3.22e-10 | 95 |
presumptive ectoderm | 3.22e-10 | 95 |
neurectoderm | 1.14e-08 | 64 |
neural plate | 1.14e-08 | 64 |
presumptive neural plate | 1.14e-08 | 64 |
ecto-epithelium | 1.71e-07 | 73 |