FFCP PHASE1:Hg19::chr3:147114396..147114403,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=84107 | |EntrezGene=84107 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=20393 | |HGNC=20393 | ||
|TSSclassifier=strong | |||
|UniProt=Q8N9L1 | |UniProt=Q8N9L1 | ||
|association_with_transcript=-111bp_to_AK094286_5end | |||
|cluster_id=chr3:147114396..147114403,- | |||
|coexpression_cluster_id=C11 | |||
|description=CAGE_peak_23_at_ZIC4_5end | |||
|id=chr3:147114396..147114403,- | |||
|ontology_enrichment_celltype=CL:0000708!3.88e-29!3;CL:0002603!6.52e-14!3;CL:0000064!1.16e-13!3;CL:0005012!1.16e-13!3;CL:0000067!1.16e-13!3;CL:0002304!1.16e-13!3;CL:0000342!8.22e-11!1;CL:0002565!8.22e-11!1 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;2.79e-195;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002037!1.09e-40!6;UBERON:0006215!1.09e-40!6;UBERON:0003210!3.88e-29!3;UBERON:0004733!1.25e-28!12;UBERON:0002028!1.25e-28!12;UBERON:0007277!1.25e-28!12;UBERON:0002680!3.86e-27!9;UBERON:0001895!3.86e-27!9;UBERON:0010092!3.86e-27!9;UBERON:0004732!2.10e-26!13;UBERON:0003076!7.68e-23!15;UBERON:0003057!7.68e-23!15;UBERON:0000488!6.17e-22!4;UBERON:0002616!6.23e-21!59;UBERON:0003075!4.01e-19!86;UBERON:0007284!4.01e-19!86;UBERON:0002346!3.48e-18!90;UBERON:0001049!4.09e-18!57;UBERON:0005068!4.09e-18!57;UBERON:0006241!4.09e-18!57;UBERON:0007135!4.09e-18!57;UBERON:0000955!2.11e-17!69;UBERON:0006238!2.11e-17!69;UBERON:0002203!7.75e-15!6;UBERON:0001768!7.75e-15!6;UBERON:0000033!1.03e-14!123;UBERON:0001017!2.02e-14!82;UBERON:0002200!3.77e-14!11;UBERON:0006876!3.77e-14!11;UBERON:0000153!6.29e-14!129;UBERON:0007811!6.29e-14!129;UBERON:0005743!1.12e-13!86;UBERON:0001778!1.16e-13!3;UBERON:0001775!1.16e-13!3;UBERON:0000073!3.10e-12!94;UBERON:0001016!3.10e-12!94;UBERON:0002506!8.22e-11!1;UBERON:0001769!8.22e-11!1;UBERON:0002038!9.97e-11!1;UBERON:0009661!9.97e-11!1;UBERON:0002336!1.46e-10!1;UBERON:0001018!1.46e-10!1;UBERON:0002473!1.46e-10!1;UBERON:0005340!1.46e-10!1;UBERON:0002316!1.46e-10!1;UBERON:0003544!1.46e-10!1;UBERON:0001020!1.46e-10!1;UBERON:0005970!1.46e-10!1;UBERON:0002437!1.46e-10!1;UBERON:0004121!5.03e-10!169;UBERON:0000924!9.67e-10!173;UBERON:0006601!9.67e-10!173;UBERON:0003056!1.08e-08!61;UBERON:0007625!2.45e-08!11;UBERON:0000119!4.81e-07!312;UBERON:0000063!8.63e-07!97 | |||
|ontology_enrichment_uberon_v019=UBERON:0002037;1.83e-98;6!UBERON:0002680;3.75e-66;9!UBERON:0001895;3.75e-66;9!UBERON:0004733;5.59e-50;12!UBERON:0002028;5.59e-50;12!UBERON:0004732;3.04e-46;13!UBERON:0000073;8.13e-09;53!UBERON:0002616;8.13e-09;53!UBERON:0001016;9.28e-08;83!UBERON:0000955;1.62e-07;68!UBERON:0001017;8.55e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,1.83e-98,6;UBERON:0006215,1.83e-98,6;UBERON:0002680,3.75e-66,9;UBERON:0001895,3.75e-66,9;UBERON:0010092,3.75e-66,9;UBERON:0004733,5.59e-50,12;UBERON:0002028,5.59e-50,12;UBERON:0007277,5.59e-50,12;UBERON:0004732,3.04e-46,13;UBERON:0003076,2.90e-40,15;UBERON:0003057,2.90e-40,15;UBERON:0000073,4.68e-12,53;UBERON:0002616,4.68e-12,53;UBERON:0001049,1.77e-11,56;UBERON:0005068,1.77e-11,56;UBERON:0006241,1.77e-11,56;UBERON:0007135,1.77e-11,56;UBERON:0000955,1.53e-09,68;UBERON:0006238,1.53e-09,68;UBERON:0001017,3.31e-08,81;UBERON:0003075,3.31e-08,82;UBERON:0007284,3.31e-08,82;UBERON:0002346,7.10e-08,86;UBERON:0001016,1.68e-07,89 | |||
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|short_description=p23@ZIC4 | |||
}} | }} |
Latest revision as of 18:25, 15 September 2015
Short description: | p23@ZIC4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_23_at_ZIC4_5end |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | -111bp_to_AK094286_5end |
EntrezGene: | ZIC4 |
HGNC: | 20393 |
UniProt: | Q8N9L1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cerebellum | 1.83e-98 | 6 |
rhombic lip | 1.83e-98 | 6 |
regional part of metencephalon | 3.75e-66 | 9 |
metencephalon | 3.75e-66 | 9 |
future metencephalon | 3.75e-66 | 9 |
segmental subdivision of hindbrain | 5.59e-50 | 12 |
hindbrain | 5.59e-50 | 12 |
presumptive hindbrain | 5.59e-50 | 12 |
segmental subdivision of nervous system | 3.04e-46 | 13 |
posterior neural tube | 2.90e-40 | 15 |
chordal neural plate | 2.90e-40 | 15 |
regional part of nervous system | 4.68e-12 | 53 |
regional part of brain | 4.68e-12 | 53 |
neural tube | 1.77e-11 | 56 |
neural rod | 1.77e-11 | 56 |
future spinal cord | 1.77e-11 | 56 |
neural keel | 1.77e-11 | 56 |
brain | 1.53e-09 | 68 |
future brain | 1.53e-09 | 68 |
central nervous system | 3.31e-08 | 81 |
neural plate | 3.31e-08 | 82 |
presumptive neural plate | 3.31e-08 | 82 |
neurectoderm | 7.10e-08 | 86 |
nervous system | 1.68e-07 | 89 |