FFCP PHASE1:Hg19::chr3:147139238..147139247,+: Difference between revisions
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|id=chr3:147139238..147139247,+
|short_description=p26@ZIC1
|description=CAGE_peak_26_at_ZIC1_5end
|association_with_transcript=124bp_to_ENST00000474034_5end
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7545 | |EntrezGene=7545 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12872 | |HGNC=12872 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=124bp_to_ENST00000474034_5end | |||
|cluster_id=chr3:147139238..147139247,+ | |||
|coexpression_cluster_id=C711 | |||
|description=CAGE_peak_26_at_ZIC1_5end | |||
|id=chr3:147139238..147139247,+ | |||
|ontology_enrichment_celltype=CL:0000064!1.42e-16!3;CL:0005012!1.42e-16!3;CL:0000067!1.42e-16!3;CL:0002304!1.42e-16!3;CL:0002590!2.78e-16!3;CL:0002603!5.41e-16!3;CL:0002575!1.24e-11!2;CL:0002549!2.20e-11!2;CL:0000708!5.93e-08!3;CL:0000128!4.09e-07!7;CL:0000126!4.09e-07!7;CL:0000127!4.09e-07!7;CL:0002453!4.09e-07!7;CL:0002561!9.81e-07!1 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;2.78e-195;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p26@ZIC1 | |||
}} | }} |
Latest revision as of 19:27, 15 September 2015
Short description: | p26@ZIC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_26_at_ZIC1_5end |
Coexpression cluster: | C711_cerebellum_Pericytes_Fibroblast_Meningeal_spinal_Astrocyte_Hair |
Association with transcript: | 124bp_to_ENST00000474034_5end |
EntrezGene: | ZIC1 |
HGNC: | 12872 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cerebellum | 1.83e-98 | 6 |
rhombic lip | 1.83e-98 | 6 |
regional part of metencephalon | 3.75e-66 | 9 |
metencephalon | 3.75e-66 | 9 |
future metencephalon | 3.75e-66 | 9 |
segmental subdivision of hindbrain | 5.59e-50 | 12 |
hindbrain | 5.59e-50 | 12 |
presumptive hindbrain | 5.59e-50 | 12 |
segmental subdivision of nervous system | 3.04e-46 | 13 |
posterior neural tube | 2.90e-40 | 15 |
chordal neural plate | 2.90e-40 | 15 |
regional part of nervous system | 4.68e-12 | 53 |
regional part of brain | 4.68e-12 | 53 |
neural tube | 1.77e-11 | 56 |
neural rod | 1.77e-11 | 56 |
future spinal cord | 1.77e-11 | 56 |
neural keel | 1.77e-11 | 56 |
brain | 1.53e-09 | 68 |
future brain | 1.53e-09 | 68 |
central nervous system | 3.31e-08 | 81 |
neural plate | 3.31e-08 | 82 |
presumptive neural plate | 3.31e-08 | 82 |
neurectoderm | 7.10e-08 | 86 |
nervous system | 1.68e-07 | 89 |