FFCP PHASE1:Hg19::chr12:102091400..102091487,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=56994 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17852 | |||
|TSSclassifier=strong | |||
|UniProt=Q8WUD6,F5GZZ1,F8W1B3 | |||
|association_with_transcript=0bp_to_ENST00000229266,ENST00000543999,ENST00000549128,ENST00000549872,ENST00000552351,NM_020244,uc001tin.2,uc001tio.2,uc001tip.1_5end | |||
|cluster_id=chr12:102091400..102091487,+ | |||
|description=CAGE_peak_1_at_CHPT1_5end | |||
|id=chr12:102091400..102091487,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.17e-35!115;UBERON:0001049!5.12e-13!57;UBERON:0005068!5.12e-13!57;UBERON:0006241!5.12e-13!57;UBERON:0007135!5.12e-13!57;UBERON:0002616!7.40e-11!59;UBERON:0003080!1.47e-10!42;UBERON:0002020!1.88e-10!34;UBERON:0003528!1.88e-10!34;UBERON:0005743!5.29e-10!86;UBERON:0002780!5.32e-10!41;UBERON:0001890!5.32e-10!41;UBERON:0006240!5.32e-10!41;UBERON:0001893!5.34e-10!34;UBERON:0001017!7.45e-10!82;UBERON:0002791!7.68e-10!33;UBERON:0001869!1.03e-09!32;UBERON:0000073!1.13e-08!94;UBERON:0001016!1.13e-08!94;UBERON:0003075!1.28e-08!86;UBERON:0007284!1.28e-08!86;UBERON:0000955!1.29e-08!69;UBERON:0006238!1.29e-08!69;UBERON:0000956!1.00e-07!25;UBERON:0000203!1.00e-07!25;UBERON:0002346!2.98e-07!90 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;3.06e-09;114!UBERON:0003528;4.57e-09;34!UBERON:0002020;4.57e-09;34!UBERON:0002791;4.59e-09;32!UBERON:0001869;6.53e-09;32!UBERON:0001893;1.51e-08;34!UBERON:0000956;1.01e-07;25!UBERON:0000203;1.01e-07;25!UBERON:0002780;1.56e-07;41!UBERON:0001890;1.56e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.48e-34,114;UBERON:0001049,1.84e-12,56;UBERON:0005068,1.84e-12,56;UBERON:0006241,1.84e-12,56;UBERON:0007135,1.84e-12,56;UBERON:0000073,2.75e-11,53;UBERON:0002616,2.75e-11,53;UBERON:0003528,1.88e-10,34;UBERON:0002020,1.88e-10,34;UBERON:0002780,5.32e-10,41;UBERON:0001890,5.32e-10,41;UBERON:0003080,5.32e-10,41;UBERON:0006240,5.32e-10,41;UBERON:0001893,5.34e-10,34;UBERON:0002791,8.83e-10,32;UBERON:0001869,1.03e-09,32;UBERON:0001017,2.06e-09,81;UBERON:0003075,1.75e-08,82;UBERON:0007284,1.75e-08,82;UBERON:0000955,3.53e-08,68;UBERON:0006238,3.53e-08,68;UBERON:0001016,4.23e-08,89;UBERON:0000956,1.00e-07,25;UBERON:0000203,1.00e-07,25;UBERON:0011216,3.61e-07,223;UBERON:0002346,4.25e-07,86 | |||
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| |||
|short_description=p1@CHPT1 | |||
}} |
Latest revision as of 19:30, 15 September 2015
Short description: | p1@CHPT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CHPT1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000229266, ENST00000543999, ENST00000549128, ENST00000549872, ENST00000552351, NM_020244, uc001tin.2, uc001tio.2, uc001tip.1_5end |
EntrezGene: | CHPT1 |
HGNC: | 17852 |
UniProt: | Q8WUD6F5GZZ1F8W1B3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 1.48e-34 | 114 |
neural tube | 1.84e-12 | 56 |
neural rod | 1.84e-12 | 56 |
future spinal cord | 1.84e-12 | 56 |
neural keel | 1.84e-12 | 56 |
regional part of nervous system | 2.75e-11 | 53 |
regional part of brain | 2.75e-11 | 53 |
brain grey matter | 1.88e-10 | 34 |
gray matter | 1.88e-10 | 34 |
regional part of forebrain | 5.32e-10 | 41 |
forebrain | 5.32e-10 | 41 |
anterior neural tube | 5.32e-10 | 41 |
future forebrain | 5.32e-10 | 41 |
telencephalon | 5.34e-10 | 34 |
regional part of telencephalon | 8.83e-10 | 32 |
cerebral hemisphere | 1.03e-09 | 32 |
central nervous system | 2.06e-09 | 81 |
neural plate | 1.75e-08 | 82 |
presumptive neural plate | 1.75e-08 | 82 |
brain | 3.53e-08 | 68 |
future brain | 3.53e-08 | 68 |
nervous system | 4.23e-08 | 89 |
cerebral cortex | 1.00e-07 | 25 |
pallium | 1.00e-07 | 25 |
organ system subdivision | 3.61e-07 | 223 |
neurectoderm | 4.25e-07 | 86 |