FFCP PHASE1:Hg19::chr16:2569209..2569233,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=527 | |EntrezGene=527 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=855 | |HGNC=855 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=1bp_to_uc002cqo.2_5end | |association_with_transcript=1bp_to_uc002cqo.2_5end | ||
|cluster_id=chr16:2569209..2569233,+ | |||
|coexpression_cluster_id=C1758 | |coexpression_cluster_id=C1758 | ||
|description=CAGE_peak_3_at_ATP6V0C_5end | |description=CAGE_peak_3_at_ATP6V0C_5end | ||
|id=chr16:2569209..2569233,+ | |id=chr16:2569209..2569233,+ | ||
|ontology_enrichment_celltype=CL:0002057!3.88e-16!42;CL:0000860!1.03e-15!45;CL:0002194!3.27e-15!63;CL:0000576!3.27e-15!63;CL:0000040!3.27e-15!63;CL:0000559!3.27e-15!63;CL:0002009!3.83e-15!65;CL:0000766!2.27e-13!76;CL:0000839!6.82e-13!70;CL:0000557!8.60e-13!71 | |ontology_enrichment_celltype=CL:0002057!3.88e-16!42;CL:0000860!1.03e-15!45;CL:0002194!3.27e-15!63;CL:0000576!3.27e-15!63;CL:0000040!3.27e-15!63;CL:0000559!3.27e-15!63;CL:0002009!3.83e-15!65;CL:0000766!2.27e-13!76;CL:0000839!6.82e-13!70;CL:0000557!8.60e-13!71 | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.02e-17;33!CL:0002057;3.02e-17;33!CL:0000473;7.45e-17;39!CL:0000234;7.45e-17;39!CL:0000576;1.05e-09;48!CL:0000766;2.27e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,5.66e-19,48;CL:0000234,5.66e-19,48;CL:0000860,3.33e-16,42;CL:0002057,3.33e-16,42;CL:0002194,4.57e-16,59;CL:0000576,4.57e-16,59;CL:0000040,4.57e-16,59;CL:0000559,4.57e-16,59;CL:0002009,5.77e-16,61;CL:0000766,5.24e-14,72;CL:0000839,1.60e-13,66;CL:0000557,1.70e-13,67 | |||
|ontology_enrichment_development_v019=CL:0002057;7.11e-12;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!8.87e-11!80;UBERON:0002390!1.96e-10!102;UBERON:0003061!1.96e-10!102;UBERON:0003081!9.68e-10!216;UBERON:0002193!1.60e-09!112;UBERON:0000468!2.28e-09!659;UBERON:0000922!3.43e-09!612;UBERON:0000923!7.80e-09!604;UBERON:0005291!7.80e-09!604;UBERON:0006598!7.80e-09!604;UBERON:0002532!7.80e-09!604;UBERON:0002050!1.00e-08!605;UBERON:0005423!1.00e-08!605;UBERON:0001474!1.80e-08!86;UBERON:0004765!2.26e-08!101;UBERON:0001434!2.26e-08!101;UBERON:0000467!4.09e-08!625;UBERON:0000480!6.72e-08!626;UBERON:0002204!8.71e-08!167 | |ontology_enrichment_uberon=UBERON:0002371!8.87e-11!80;UBERON:0002390!1.96e-10!102;UBERON:0003061!1.96e-10!102;UBERON:0003081!9.68e-10!216;UBERON:0002193!1.60e-09!112;UBERON:0000468!2.28e-09!659;UBERON:0000922!3.43e-09!612;UBERON:0000923!7.80e-09!604;UBERON:0005291!7.80e-09!604;UBERON:0006598!7.80e-09!604;UBERON:0002532!7.80e-09!604;UBERON:0002050!1.00e-08!605;UBERON:0005423!1.00e-08!605;UBERON:0001474!1.80e-08!86;UBERON:0004765!2.26e-08!101;UBERON:0001434!2.26e-08!101;UBERON:0000467!4.09e-08!625;UBERON:0000480!6.72e-08!626;UBERON:0002204!8.71e-08!167 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.24e-11,76;UBERON:0002390,5.61e-11,98;UBERON:0003061,5.61e-11,98;UBERON:0005423,3.26e-10,581;UBERON:0002050,3.26e-10,564;UBERON:0000922,4.97e-10,592;UBERON:0000923,5.02e-10,560;UBERON:0010316,5.02e-10,560;UBERON:0005291,5.02e-10,560;UBERON:0006598,5.02e-10,560;UBERON:0010317,5.02e-10,560;UBERON:0002532,5.02e-10,560;UBERON:0002193,6.25e-10,108;UBERON:0003081,1.96e-09,203;UBERON:0000926,3.52e-09,315;UBERON:0004120,3.52e-09,315;UBERON:0006603,3.52e-09,315;UBERON:0001434,6.33e-09,100;UBERON:0001474,6.37e-09,82;UBERON:0004765,6.89e-09,90;UBERON:0002204,5.39e-08,167;UBERON:0002405,9.42e-08,93;UBERON:0001049,8.93e-07,56;UBERON:0005068,8.93e-07,56;UBERON:0006241,8.93e-07,56;UBERON:0007135,8.93e-07,56 | |||
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| ||
|short_description=p3@ATP6V0C | |short_description=p3@ATP6V0C | ||
}} | }} |
Latest revision as of 20:11, 15 September 2015
Short description: | p3@ATP6V0C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ATP6V0C_5end |
Coexpression cluster: | C1758_Monocytederived_Neutrophils_medial_Whole_Smooth_leiomyoma_amygdala |
Association with transcript: | 1bp_to_uc002cqo.2_5end |
EntrezGene: | ATP6V0C |
HGNC: | 855 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 5.66e-19 | 48 |
phagocyte | 5.66e-19 | 48 |
classical monocyte | 3.33e-16 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.33e-16 | 42 |
monopoietic cell | 4.57e-16 | 59 |
monocyte | 4.57e-16 | 59 |
monoblast | 4.57e-16 | 59 |
promonocyte | 4.57e-16 | 59 |
macrophage dendritic cell progenitor | 5.77e-16 | 61 |
myeloid leukocyte | 5.24e-14 | 72 |
myeloid lineage restricted progenitor cell | 1.60e-13 | 66 |
granulocyte monocyte progenitor cell | 1.70e-13 | 67 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.24e-11 | 76 |
hematopoietic system | 5.61e-11 | 98 |
blood island | 5.61e-11 | 98 |
developing anatomical structure | 3.26e-10 | 581 |
embryonic structure | 3.26e-10 | 564 |
embryo | 4.97e-10 | 592 |
germ layer | 5.02e-10 | 560 |
germ layer / neural crest | 5.02e-10 | 560 |
embryonic tissue | 5.02e-10 | 560 |
presumptive structure | 5.02e-10 | 560 |
germ layer / neural crest derived structure | 5.02e-10 | 560 |
epiblast (generic) | 5.02e-10 | 560 |
hemolymphoid system | 6.25e-10 | 108 |
lateral plate mesoderm | 1.96e-09 | 203 |
mesoderm | 3.52e-09 | 315 |
mesoderm-derived structure | 3.52e-09 | 315 |
presumptive mesoderm | 3.52e-09 | 315 |
skeletal system | 6.33e-09 | 100 |
bone element | 6.37e-09 | 82 |
skeletal element | 6.89e-09 | 90 |
musculoskeletal system | 5.39e-08 | 167 |
immune system | 9.42e-08 | 93 |
neural tube | 8.93e-07 | 56 |
neural rod | 8.93e-07 | 56 |
future spinal cord | 8.93e-07 | 56 |
neural keel | 8.93e-07 | 56 |