FFCP PHASE1:Hg19::chr17:47287948..47287972,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2793 | |EntrezGene=2793 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4412 | |HGNC=4412 | ||
|TSSclassifier=strong | |||
|UniProt=O14610 | |UniProt=O14610 | ||
|association_with_transcript=-12bp_to_ENST00000507680,NM_001198754_5end | |association_with_transcript=-12bp_to_ENST00000507680,NM_001198754_5end | ||
|cluster_id=chr17:47287948..47287972,- | |||
|description=CAGE_peak_3_at_GNGT2_5end | |description=CAGE_peak_3_at_GNGT2_5end | ||
|id=chr17:47287948..47287972,- | |id=chr17:47287948..47287972,- | ||
|ontology_enrichment_celltype=CL:0002087!1.38e-44!119;CL:0000738!2.01e-42!140;CL:0002031!4.14e-38!124;CL:0000037!5.20e-36!172;CL:0000566!5.20e-36!172;CL:0002032!3.76e-34!165;CL:0000837!3.76e-34!165;CL:0000988!2.39e-32!182;CL:0000542!5.65e-24!53;CL:0000051!5.65e-24!53;CL:0000838!2.69e-23!52;CL:0002009!6.24e-19!65;CL:0002194!3.78e-18!63;CL:0000576!3.78e-18!63;CL:0000040!3.78e-18!63;CL:0000559!3.78e-18!63;CL:0000557!8.19e-16!71;CL:0000766!6.40e-15!76;CL:0002057!1.13e-14!42;CL:0000839!1.28e-14!70;CL:0000945!4.82e-13!24;CL:0000826!4.82e-13!24;CL:0000860!7.29e-13!45;CL:0000763!8.40e-13!112;CL:0000049!8.40e-13!112;CL:0000084!1.77e-09!25;CL:0000827!1.77e-09!25;CL:0000625!3.52e-09!11;CL:0000791!8.25e-09!18;CL:0000789!8.25e-09!18;CL:0002420!8.25e-09!18;CL:0002419!8.25e-09!18;CL:0000790!8.25e-09!18;CL:0002393!3.35e-07!9;CL:0002397!3.35e-07!9 | |ontology_enrichment_celltype=CL:0002087!1.38e-44!119;CL:0000738!2.01e-42!140;CL:0002031!4.14e-38!124;CL:0000037!5.20e-36!172;CL:0000566!5.20e-36!172;CL:0002032!3.76e-34!165;CL:0000837!3.76e-34!165;CL:0000988!2.39e-32!182;CL:0000542!5.65e-24!53;CL:0000051!5.65e-24!53;CL:0000838!2.69e-23!52;CL:0002009!6.24e-19!65;CL:0002194!3.78e-18!63;CL:0000576!3.78e-18!63;CL:0000040!3.78e-18!63;CL:0000559!3.78e-18!63;CL:0000557!8.19e-16!71;CL:0000766!6.40e-15!76;CL:0002057!1.13e-14!42;CL:0000839!1.28e-14!70;CL:0000945!4.82e-13!24;CL:0000826!4.82e-13!24;CL:0000860!7.29e-13!45;CL:0000763!8.40e-13!112;CL:0000049!8.40e-13!112;CL:0000084!1.77e-09!25;CL:0000827!1.77e-09!25;CL:0000625!3.52e-09!11;CL:0000791!8.25e-09!18;CL:0000789!8.25e-09!18;CL:0002420!8.25e-09!18;CL:0002419!8.25e-09!18;CL:0000790!8.25e-09!18;CL:0002393!3.35e-07!9;CL:0002397!3.35e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0000945;1.41e-20;24!CL:0000542;7.43e-20;53!CL:0002087;1.55e-16;104!CL:0000084;1.48e-13;25!CL:0000576;5.00e-12;48!CL:0000738;5.17e-12;136!CL:0000791;5.40e-12;18!CL:0000789;5.40e-12;18!CL:0002419;5.40e-12;18!CL:0000625;3.24e-11;11!CL:0000875;2.76e-08;3!CL:0002396;2.76e-08;3!CL:0000988;5.21e-08;177!CL:0000766;1.17e-07;69!CL:0002619;3.73e-07;3!CL:0000623;3.73e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002087,1.78e-58,115;CL:0002031,2.40e-49,120;CL:0000738,9.48e-49,136;CL:0000037,2.49e-40,168;CL:0002032,1.08e-39,161;CL:0000837,1.08e-39,161;CL:0000542,9.12e-39,53;CL:0000051,9.12e-39,53;CL:0000988,2.33e-37,177;CL:0000838,2.55e-37,52;CL:0000945,9.90e-21,24;CL:0000826,9.90e-21,24;CL:0002194,2.50e-18,59;CL:0000576,2.50e-18,59;CL:0000040,2.50e-18,59;CL:0000559,2.50e-18,59;CL:0002009,1.73e-17,61;CL:0000839,1.29e-15,66;CL:0000473,2.06e-15,48;CL:0000234,2.06e-15,48;CL:0000557,2.82e-15,67;CL:0000766,4.24e-15,72;CL:0000084,1.94e-13,25;CL:0000827,1.94e-13,25;CL:0000860,5.81e-13,42;CL:0002057,5.81e-13,42;CL:0002393,1.69e-12,9;CL:0002397,1.69e-12,9;CL:0000791,7.76e-12,18;CL:0000789,7.76e-12,18;CL:0002420,7.76e-12,18;CL:0002419,7.76e-12,18;CL:0000790,7.76e-12,18;CL:0000625,4.04e-11,11;CL:0000134,1.29e-10,354;CL:0002320,4.30e-10,361;CL:0000763,5.55e-10,108;CL:0000049,5.55e-10,108;CL:0000219,2.41e-09,386;CL:0000875,2.83e-08,3;CL:0002396,2.83e-08,3;CL:0000817,1.86e-07,3;CL:0002619,3.12e-07,3;CL:0000623,6.11e-07,3;CL:0000825,6.11e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000051;7.43e-20;53!CL:0000790;5.40e-12;18!CL:0002057;1.77e-09;42 | |||
|ontology_enrichment_disease=DOID:0060058!5.03e-08!10 | |ontology_enrichment_disease=DOID:0060058!5.03e-08!10 | ||
|ontology_enrichment_disease_v019=DOID:0060058;5.84e-14;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,4.80e-14,10;DOID:2531,4.51e-07,51;DOID:0060083,4.51e-07,51 | |||
|ontology_enrichment_uberon=UBERON:0002390!3.61e-21!102;UBERON:0003061!3.61e-21!102;UBERON:0002193!4.94e-21!112;UBERON:0002371!4.32e-13!80;UBERON:0002405!1.80e-11!115;UBERON:0001474!5.02e-11!86;UBERON:0004765!4.51e-09!101;UBERON:0001434!4.51e-09!101;UBERON:0007023!1.62e-08!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0002106;1.96e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.28e-23,98;UBERON:0003061,2.28e-23,98;UBERON:0002193,1.87e-21,108;UBERON:0002405,9.18e-17,93;UBERON:0002371,6.58e-14,76;UBERON:0001474,2.35e-12,82;UBERON:0004765,1.28e-10,90;UBERON:0002384,6.06e-10,371;UBERON:0001434,7.24e-09,100;UBERON:0004177,7.57e-08,7;UBERON:0005057,7.57e-08,7;UBERON:0003081,1.27e-07,203;UBERON:0002106,1.74e-07,3;UBERON:0004854,1.74e-07,3;UBERON:0009034,1.74e-07,3;UBERON:0002095,1.74e-07,3;UBERON:0004782,1.74e-07,3;UBERON:0003281,1.74e-07,3;UBERON:0009664,1.74e-07,3;UBERON:0002296,1.74e-07,3;UBERON:0005602,1.74e-07,3;UBERON:0001179,1.74e-07,3;UBERON:0006293,1.74e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.37129905888014,0,0,0,0,0,0,0.408001382488506,0,0,0,0,6.41872608282791,4.43343183029707,5.66717625458491,3.14691421479123,0.767658796194425,0.928896739896456,0,0,0,9.4509984707968,3.9807385096478,0,0,0.601633342410425,1.95309783644267,2.01523926815932,1.6194683300949,2.83333124397605,1.59938062657521,1.13362783106643,1.69808842831471,0.464858073811369,0,0,1.1507695692886,0.512321413058201,1.18241114944293,0.689491361473237,0,0,0.564727018627814,0.545812300115692,0.898893937780338,0.918251677112708,0.320929027076094,1.27867425159808,1.31940520074686,1.99463657621632,1.70489900213078,0.290209238628584,0,0,0.75374599577023,1.5644487552606,0.868755378820466,0.605399502633369,0,0,4.01385043992689,4.889898899196,4.40283155567589,1.01095768031846,1.05123824989054,0.48217676009124,6.84030584978997,5.37075028437543,6.39324538176219,1.75996244461323,1.09227722252426,0.889509253863555,0.853460445133014,2.00197993518006,0.574752439954483,0.661044872784862,0,0,0,0,0,1.68152568894461,0.263384084775077,0,0.393010762749165,0,0.668745981562712,0,0.946895611469467,0,2.1167986808183,1.17842362989935,0.221533894583621,0.812411591295047,1.79327847615945,1.43065282315866,1.47994114143309,2.21080014228679,1.73881851441031,0.444859689486181,0.267540828089713,2.09071047609954,1.47302145506836,1.53288197440768,0.34362744548263,0.759059076058509,2.54852331459277,0.651083453856419,0.950452044448374,0.451725357233318,1.79181255616186,1.24930726552346,2.13099526839615,4.10563998460523,1.41124720257313,2.13952156626806,1.15859523106239,0,0,0,0,0.50133791063589,0,0,0,0.0945348171640679,0.443458794925128,0,0.0654895377488563,0,0,1.9472843619281,1.91542711029194,0.930705723632056,0.476981248610684,0.571994910780128,0.371457501329565,0.198762407366705,0.860234595106124,0.694281003215189,0.56530794192401,0.419499436209906,0,0,0.258416759169329,0,0.33472061276467,0.402829317109147,0,0,0,0,0.267899184852239,0.22452937262617,0.337834441449967,0,0,0.366403487860815,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0.612975591598039,0,0,0,0,0,0,0,0,0.18611685633159,0,0,0,0,0,0,0,0.508681776931463,0,0,0,0,0,0,0.10366105501537,0.252320850875628,1.09493207722749,1.56449532329816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0.288732895522148,0,0,0,0,0.738651018262192,0.468008530278475,0.743155811443641,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.64871341923571,2.00902836572851,4.21667878966063,0,0,0,0,0,0,4.03506518376698,2.75843064282698,1.07813787429759,2.05348858047597,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0.0868836144680828,0,0,0.620304078368662,1.72571360654893,1.70764092485511,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0.177561725313127,0,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0.15350367472613,0,0.214840489736547,0.580066775656914,0.170453254832202,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0.318203247925937,0,0.179872457583315,0,0,0,0,0,0,0.243713489631284,0,0,0,1.13008116620243,0,0,0,0.578775534266688,0,0,0,0,0,0,0,0,0.422215270595328,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0.507447609232169,2.29391162142713,1.70894156152249,0.714695326373367,1.64544909234478,0,0.540031437238115,1.58625035258854,0,0,0,1.30062222588003,2.59684583357601,0,2.07254154547469,0.199579371432817,1.1490322207942,1.2700414963433,0,0,0.228234679033192,0.313359791546046,0,0.50787533340481,0.963528450622197,0.605399121573143,0,0.687010689511529,0,0,0,1.17232857241224,0,0,0,0,0,0,0.146508179271894,0,2.563197838382,0,0,0,0,0,0.140669416410513,0,2.63686198762815,0,0.597743964753209,1.93398740871803,0,0,4.4310529965985,0,0,0,0,0.197286811273867,2.3948309234694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241192877250816,0,0.110579259931225,0,0.658156191461918,0,0,0.384751292518985,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.0884575645033392,0.611030144933625,0,0,0,0.539209063845416,0,0.234264445725339,1.45963831372533,0,0,0,0,0,0.63186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290967049465258,0,0.451961481561065,0,0.19871461170299,0.189932387867636,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,1.09524303113594,0,0,0,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,0,3.13291328643403,0,0.408610218334727,0.160753148465019,0.137539436597234,0,0.2249738915515,0.77380195455795,0,0,0.394028536495991,0.104909176269996,0.105600336519406,0,0,0,1.98627591109629,0,0,0,0,0,0,0,0,0.293104467356165,0,0,0.26446520348538,0,0,0.747511887973863,0.471612915298998,2.48543433208317,0.992332043623902,0,4.62811873847405,0,0,0.2506898940227,0,0,0,0,0,0.1251909307065,0,0.110929051536852,0.372578417648301,0,0,0,0,0,0,0,0.149254802886874,0,0,0,0,0,0,0,0,0,0,0,0,0.414706207840855,0,0,0,0,0,0.363697318405119,0,0,0,0.800055529326307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414775308455192,0.194860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| ||
|short_description=p3@GNGT2 | |short_description=p3@GNGT2 | ||
}} | }} |
Latest revision as of 20:12, 15 September 2015
Short description: | p3@GNGT2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_GNGT2_5end |
Coexpression cluster: | NA |
Association with transcript: | -12bp_to_ENST00000507680, NM_001198754_5end |
EntrezGene: | GNGT2 |
HGNC: | 4412 |
UniProt: | O14610 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.28e-23 | 98 |
blood island | 2.28e-23 | 98 |
hemolymphoid system | 1.87e-21 | 108 |
immune system | 9.18e-17 | 93 |
bone marrow | 6.58e-14 | 76 |
bone element | 2.35e-12 | 82 |
skeletal element | 1.28e-10 | 90 |
connective tissue | 6.06e-10 | 371 |
skeletal system | 7.24e-09 | 100 |
hemopoietic organ | 7.57e-08 | 7 |
immune organ | 7.57e-08 | 7 |
lateral plate mesoderm | 1.27e-07 | 203 |
spleen | 1.74e-07 | 3 |
gastrointestinal system mesentery | 1.74e-07 | 3 |
stomach region | 1.74e-07 | 3 |
mesentery | 1.74e-07 | 3 |
gastrointestinal system serosa | 1.74e-07 | 3 |
mesentery of stomach | 1.74e-07 | 3 |
gut mesentery | 1.74e-07 | 3 |
dorsal mesentery | 1.74e-07 | 3 |
dorsal mesogastrium | 1.74e-07 | 3 |
peritoneal cavity | 1.74e-07 | 3 |
spleen primordium | 1.74e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 4.80e-14 | 10 |
hematologic cancer | 4.51e-07 | 51 |
immune system cancer | 4.51e-07 | 51 |