FFCP PHASE1:Hg19::chr12:102291321..102291328,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt=Q71M31 | |||
|association_with_transcript=79bp_to_AF461896_5end | |||
|cluster_id=chr12:102291321..102291328,+ | |||
|coexpression_cluster_id=C6 | |||
|description=CAGE_peak_1_at_AF461896_5end | |||
|id=chr12:102291321..102291328,+ | |||
|ontology_enrichment_celltype=CL:0000860!1.35e-28!45;CL:0002057!1.64e-27!42;CL:0000839!1.12e-19!70;CL:0000557!2.95e-19!71;CL:0000766!1.05e-18!76;CL:0002194!1.48e-18!63;CL:0000576!1.48e-18!63;CL:0000040!1.48e-18!63;CL:0000559!1.48e-18!63;CL:0002031!4.05e-18!124;CL:0002009!1.07e-17!65;CL:0002087!1.90e-17!119;CL:0000738!1.84e-16!140;CL:0000988!7.28e-14!182;CL:0002032!2.10e-13!165;CL:0000837!2.10e-13!165;CL:0000037!4.21e-13!172;CL:0000566!4.21e-13!172;CL:0000763!5.54e-12!112;CL:0000049!5.54e-12!112 | |||
|ontology_enrichment_celltype_v019=CL:0000860;8.93e-34;33!CL:0002057;8.93e-34;33!CL:0000473;5.12e-27;39!CL:0000234;5.12e-27;39!CL:0000576;3.48e-22;48!CL:0002393;9.55e-17;6!CL:0002397;9.55e-17;6!CL:0000766;3.84e-14;69!CL:0000763;2.31e-09;100!CL:0002087;9.53e-08;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,5.08e-47,42;CL:0002057,5.08e-47,42;CL:0000473,6.55e-41,48;CL:0000234,6.55e-41,48;CL:0002194,2.39e-32,59;CL:0000576,2.39e-32,59;CL:0000040,2.39e-32,59;CL:0000559,2.39e-32,59;CL:0002009,3.04e-31,61;CL:0000839,9.11e-29,66;CL:0000557,2.58e-28,67;CL:0000766,3.05e-26,72;CL:0000763,1.36e-19,108;CL:0000049,1.36e-19,108;CL:0002087,9.14e-16,115;CL:0002031,4.99e-15,120;CL:0000738,4.98e-13,136;CL:0002032,1.84e-12,161;CL:0000837,1.84e-12,161;CL:0000037,7.48e-12,168;CL:0002393,2.18e-11,9;CL:0002397,2.18e-11,9;CL:0000988,3.87e-11,177 | |||
|ontology_enrichment_development_v019=CL:0002057;1.38e-32;42!UBERON:0005425;1.25e-11;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!9.30e-20!80;UBERON:0002390!2.07e-18!102;UBERON:0003061!2.07e-18!102;UBERON:0001474!1.33e-17!86;UBERON:0002193!1.55e-16!112;UBERON:0004765!2.42e-14!101;UBERON:0001434!2.42e-14!101;UBERON:0002405!1.43e-13!115;UBERON:0002204!9.07e-08!167;UBERON:0003081!2.55e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;1.25e-11;1!UBERON:0001785;1.25e-11;1!UBERON:0002464;1.25e-11;1!UBERON:0004904;1.25e-11;1!UBERON:0001021;1.25e-11;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.36e-28,76;UBERON:0001474,2.24e-26,82;UBERON:0004765,7.14e-24,90;UBERON:0002405,4.82e-23,93;UBERON:0002390,8.99e-22,98;UBERON:0003061,8.99e-22,98;UBERON:0001434,2.67e-21,100;UBERON:0002193,1.40e-19,108;UBERON:0002204,9.09e-14,167;UBERON:0003081,1.57e-12,203;UBERON:0000941,1.07e-11,1;UBERON:0001785,1.07e-11,1;UBERON:0002464,1.07e-11,1;UBERON:0004904,1.07e-11,1;UBERON:0001021,1.07e-11,1;UBERON:0003902,1.07e-11,1;UBERON:0005425,1.07e-11,1;UBERON:0000926,3.43e-07,315;UBERON:0004120,3.43e-07,315;UBERON:0006603,3.43e-07,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0.152826811495903,0.0821005894499457,0.236132343941038,0,0,0,0,0,0,0,0,0,3.87796785972314,7.82123345133553,3.25516306073778,0.223915474239924,0,0,0.145398238779565,0,0,1.16214518452842,0.411167888021826,0.929119112685311,0.863077176966451,0.512321413058201,0.47296445977717,3.10271112662957,1.29096936716765,4.06279459783025,0.376484679085209,0,0,4.28517449319264,0,3.83602275479425,0,0.199463657621632,0,3.19230162491442,1.13477044938228,2.4912889959823,1.00499466102697,0.521482918420201,0.217188844705117,3.63239701580021,0,0.949387162322653,0,0,0,0.22465726229299,0,0.16072558669708,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0,0,0,0,0.361439152384566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22452937262617,0,0,0,0,0,0,0,0.496971951695318,0,0.264818361626438,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0.161872944368132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179117045405697,0,0,0,0.088048434013226,0,0.288239906833923,0.50496973370552,0,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0,0,1.04007436911366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0.256686072559497,0.254094624222463,0,0,0,0,0.749007023947182,0,0,0,0,0,0.415941723061614,0,0,0.234282829985426,0,0,0,0,0,0,0,0,0,0.647142602455851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0.0890320356467374,0,0.192190067365106,0,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0.190630193923825,0,0,0,0,0.179872457583315,0,0,0,1.58510321173008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,2.50634477090067,0,0,0,0,0,0,0,0,0,0,0,0,0.99921590399346,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0.222617410045812,0.16480387422676,0,0.19924798825107,0,0,0,0.369254416383208,0.311039587661807,0,0,0,0,0,0,0,0,0,0,0.0874599999961957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897576444097721,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0,0,0.296521128680622,0.494255755786011,0.208843899010911,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0967563312890851,0,0.0821154570532092,0.0969890164884194,0,0,0.137041924646751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0.0984274815147488,0.0846733320657845,0,0,0,0.137539436597234,0,0,0,0,0,0,0,0,0,0,0,0,0.25426853765475,0,0.864221491201268,0,0,0.082092520749339,0.340776043570843,0,0,0,0,0,0,0,0,0.314408610199332,0,0,0,0,0.638341257770182,0,0.2506898940227,0,0,0,0,0,0,0,0,0,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0.251567901752575,1.77962244319307,0.228840068396924,0,0,0,0,0,0,0,0.265841714557995,0,0,0,0,0,0.107410557042488,0.464033759878494,0,0,0,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106691729694141,0.172214979660816,0,0,0,0,0,0,0,0,0.169732529954025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42769420259154,0.0981477185010256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171488009437418,0,0,0,0,0,0,0,0,0,0.47775168788705,0,0,0,0,0,0,0,0,0,0.236664001461131,0.170426809518315,0,0,0,0,0.111855431797792,0,0.121917924982269,0,0,0,0.485710993059139,0,0,0,0,0,0.150962843566674,0,0,0,0,0,0,0,0,0,0,0,0.0999411559249289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109265571963696,0,0,0,0,0,0,0.267964130156178,0,0,0,0,0,0,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0.641136984606466 | |||
|short_description=p1@AF461896 | |||
}} |
Latest revision as of 20:24, 15 September 2015
Short description: | p1@AF461896 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_AF461896_5end |
Coexpression cluster: | C6_CD14_Eosinophils_Basophils_Peripheral_CD34_Natural_immature |
Association with transcript: | 79bp_to_AF461896_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 5.08e-47 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.08e-47 | 42 |
defensive cell | 6.55e-41 | 48 |
phagocyte | 6.55e-41 | 48 |
monopoietic cell | 2.39e-32 | 59 |
monocyte | 2.39e-32 | 59 |
monoblast | 2.39e-32 | 59 |
promonocyte | 2.39e-32 | 59 |
macrophage dendritic cell progenitor | 3.04e-31 | 61 |
myeloid lineage restricted progenitor cell | 9.11e-29 | 66 |
granulocyte monocyte progenitor cell | 2.58e-28 | 67 |
myeloid leukocyte | 3.05e-26 | 72 |
myeloid cell | 1.36e-19 | 108 |
common myeloid progenitor | 1.36e-19 | 108 |
nongranular leukocyte | 9.14e-16 | 115 |
hematopoietic lineage restricted progenitor cell | 4.99e-15 | 120 |
leukocyte | 4.98e-13 | 136 |
hematopoietic oligopotent progenitor cell | 1.84e-12 | 161 |
hematopoietic multipotent progenitor cell | 1.84e-12 | 161 |
hematopoietic stem cell | 7.48e-12 | 168 |
intermediate monocyte | 2.18e-11 | 9 |
CD14-positive, CD16-positive monocyte | 2.18e-11 | 9 |
hematopoietic cell | 3.87e-11 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.36e-28 | 76 |
bone element | 2.24e-26 | 82 |
skeletal element | 7.14e-24 | 90 |
immune system | 4.82e-23 | 93 |
hematopoietic system | 8.99e-22 | 98 |
blood island | 8.99e-22 | 98 |
skeletal system | 2.67e-21 | 100 |
hemolymphoid system | 1.40e-19 | 108 |
musculoskeletal system | 9.09e-14 | 167 |
lateral plate mesoderm | 1.57e-12 | 203 |
cranial nerve II | 1.07e-11 | 1 |
cranial nerve | 1.07e-11 | 1 |
nerve trunk | 1.07e-11 | 1 |
nerve connecting eye with brain | 1.07e-11 | 1 |
nerve | 1.07e-11 | 1 |
retinal neural layer | 1.07e-11 | 1 |
presumptive neural retina | 1.07e-11 | 1 |
mesoderm | 3.43e-07 | 315 |
mesoderm-derived structure | 3.43e-07 | 315 |
presumptive mesoderm | 3.43e-07 | 315 |