FFCP PHASE1:Hg19::chr17:47439437..47439533,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr17:47439437..47439533,-
|short_description=p1@ZNF652
|description=CAGE_peak_1_at_ZNF652_5end
|association_with_transcript=0bp_to_ENST00000430262,NM_001145365...") |
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(13 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=22834 | |EntrezGene=22834 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29147 | |HGNC=29147 | ||
|TSSclassifier=strong | |||
|UniProt=Q9Y2D9,A8K9F2 | |UniProt=Q9Y2D9,A8K9F2 | ||
|association_with_transcript=0bp_to_ENST00000430262,NM_001145365,uc002iou.3,uc002iov.3_5end | |||
|cluster_id=chr17:47439437..47439533,- | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_1_at_ZNF652_5end | |||
|id=chr17:47439437..47439533,- | |||
|ontology_enrichment_celltype=CL:0000738!7.91e-07!140 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.62e-10;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.60e-37!115;UBERON:0001049!3.97e-20!57;UBERON:0005068!3.97e-20!57;UBERON:0006241!3.97e-20!57;UBERON:0007135!3.97e-20!57;UBERON:0000955!3.67e-19!69;UBERON:0006238!3.67e-19!69;UBERON:0001017!5.56e-18!82;UBERON:0002616!2.75e-17!59;UBERON:0005743!1.60e-16!86;UBERON:0000073!1.79e-16!94;UBERON:0001016!1.79e-16!94;UBERON:0003080!3.21e-16!42;UBERON:0002780!4.23e-16!41;UBERON:0001890!4.23e-16!41;UBERON:0006240!4.23e-16!41;UBERON:0002020!1.24e-12!34;UBERON:0003528!1.24e-12!34;UBERON:0001893!1.47e-12!34;UBERON:0002791!4.70e-12!33;UBERON:0001869!2.49e-11!32;UBERON:0002619!1.29e-10!22;UBERON:0003075!4.20e-10!86;UBERON:0007284!4.20e-10!86;UBERON:0002346!9.68e-10!90;UBERON:0001950!1.88e-09!20;UBERON:0000153!1.88e-08!129;UBERON:0007811!1.88e-08!129;UBERON:0000956!7.36e-08!25;UBERON:0000203!7.36e-08!25;UBERON:0000033!1.59e-07!123;UBERON:0003056!2.53e-07!61;UBERON:0002308!9.72e-07!9;UBERON:0000125!9.72e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;6.22e-12;41!UBERON:0001890;6.22e-12;41!UBERON:0000073;5.34e-11;53!UBERON:0002616;5.34e-11;53!UBERON:0002619;1.16e-10;22!UBERON:0007023;1.31e-10;114!UBERON:0001893;1.40e-10;34!UBERON:0003528;1.45e-10;34!UBERON:0002020;1.45e-10;34!UBERON:0002791;3.84e-10;32!UBERON:0001869;4.75e-10;32!UBERON:0001017;1.45e-09;75!UBERON:0001950;1.70e-09;20!UBERON:0001016;5.84e-09;83!UBERON:0000955;8.58e-09;68!UBERON:0000956;7.92e-08;25!UBERON:0000203;7.92e-08;25!UBERON:0000125;9.15e-07;9!UBERON:0002308;9.15e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.11e-36,114;UBERON:0001049,5.41e-20,56;UBERON:0005068,5.41e-20,56;UBERON:0006241,5.41e-20,56;UBERON:0007135,5.41e-20,56;UBERON:0000955,5.26e-19,68;UBERON:0006238,5.26e-19,68;UBERON:0000073,3.38e-18,53;UBERON:0002616,3.38e-18,53;UBERON:0001017,8.18e-18,81;UBERON:0001016,1.19e-17,89;UBERON:0002780,4.23e-16,41;UBERON:0001890,4.23e-16,41;UBERON:0003080,4.23e-16,41;UBERON:0006240,4.23e-16,41;UBERON:0011216,9.85e-14,223;UBERON:0003528,1.24e-12,34;UBERON:0002020,1.24e-12,34;UBERON:0001893,1.47e-12,34;UBERON:0002791,1.91e-11,32;UBERON:0001869,2.49e-11,32;UBERON:0002619,1.29e-10,22;UBERON:0003075,1.49e-10,82;UBERON:0007284,1.49e-10,82;UBERON:0002346,3.73e-10,86;UBERON:0001950,1.88e-09,20;UBERON:0000956,7.36e-08,25;UBERON:0000203,7.36e-08,25;UBERON:0003056,1.29e-07,61;UBERON:0000125,9.72e-07,9;UBERON:0002308,9.72e-07,9 | |||
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| ||
|short_description=p1@ZNF652 | |||
}} | }} |
Latest revision as of 20:54, 15 September 2015
Short description: | p1@ZNF652 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ZNF652_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | 0bp_to_ENST00000430262, NM_001145365, uc002iou.3, uc002iov.3_5end |
EntrezGene: | ZNF652 |
HGNC: | 29147 |
UniProt: | Q9Y2D9A8K9F2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 1.11e-36 | 114 |
neural tube | 5.41e-20 | 56 |
neural rod | 5.41e-20 | 56 |
future spinal cord | 5.41e-20 | 56 |
neural keel | 5.41e-20 | 56 |
brain | 5.26e-19 | 68 |
future brain | 5.26e-19 | 68 |
regional part of nervous system | 3.38e-18 | 53 |
regional part of brain | 3.38e-18 | 53 |
central nervous system | 8.18e-18 | 81 |
nervous system | 1.19e-17 | 89 |
regional part of forebrain | 4.23e-16 | 41 |
forebrain | 4.23e-16 | 41 |
anterior neural tube | 4.23e-16 | 41 |
future forebrain | 4.23e-16 | 41 |
organ system subdivision | 9.85e-14 | 223 |
brain grey matter | 1.24e-12 | 34 |
gray matter | 1.24e-12 | 34 |
telencephalon | 1.47e-12 | 34 |
regional part of telencephalon | 1.91e-11 | 32 |
cerebral hemisphere | 2.49e-11 | 32 |
regional part of cerebral cortex | 1.29e-10 | 22 |
neural plate | 1.49e-10 | 82 |
presumptive neural plate | 1.49e-10 | 82 |
neurectoderm | 3.73e-10 | 86 |
neocortex | 1.88e-09 | 20 |
cerebral cortex | 7.36e-08 | 25 |
pallium | 7.36e-08 | 25 |
pre-chordal neural plate | 1.29e-07 | 61 |
neural nucleus | 9.72e-07 | 9 |
nucleus of brain | 9.72e-07 | 9 |