FFCP PHASE1:Hg19::chr2:100721881..100721904,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3899 | |EntrezGene=3899 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6473 | |HGNC=6473 | ||
|TSSclassifier=strong | |||
|UniProt=C9JZ66 | |UniProt=C9JZ66 | ||
|association_with_transcript=0bp_to_ENST00000441400_5end | |association_with_transcript=0bp_to_ENST00000441400_5end | ||
|cluster_id=chr2:100721881..100721904,- | |||
|description=CAGE_peak_6_at_AFF3_5end | |description=CAGE_peak_6_at_AFF3_5end | ||
|id=chr2:100721881..100721904,- | |id=chr2:100721881..100721904,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.78e-24!57;UBERON:0005068!2.78e-24!57;UBERON:0006241!2.78e-24!57;UBERON:0007135!2.78e-24!57;UBERON:0003075!2.87e-24!86;UBERON:0007284!2.87e-24!86;UBERON:0000073!4.19e-24!94;UBERON:0001016!4.19e-24!94;UBERON:0005743!1.21e-23!86;UBERON:0007023!1.51e-23!115;UBERON:0002616!5.26e-22!59;UBERON:0002346!5.64e-22!90;UBERON:0001017!6.70e-22!82;UBERON:0000955!4.57e-19!69;UBERON:0006238!4.57e-19!69;UBERON:0003056!1.22e-17!61;UBERON:0003080!1.06e-15!42;UBERON:0004121!1.37e-15!169;UBERON:0002780!4.39e-15!41;UBERON:0001890!4.39e-15!41;UBERON:0006240!4.39e-15!41;UBERON:0000033!5.11e-15!123;UBERON:0000153!5.58e-15!129;UBERON:0007811!5.58e-15!129;UBERON:0000924!1.72e-14!173;UBERON:0006601!1.72e-14!173;UBERON:0002020!4.16e-14!34;UBERON:0003528!4.16e-14!34;UBERON:0001893!8.95e-14!34;UBERON:0002791!1.96e-13!33;UBERON:0001869!2.99e-13!32;UBERON:0000475!2.21e-12!365;UBERON:0002619!6.90e-12!22;UBERON:0000956!7.63e-12!25;UBERON:0000203!7.63e-12!25;UBERON:0001950!1.09e-10!20;UBERON:0003076!3.93e-10!15;UBERON:0003057!3.93e-10!15;UBERON:0000064!3.73e-08!219;UBERON:0004733!5.42e-08!12;UBERON:0002028!5.42e-08!12;UBERON:0007277!5.42e-08!12;UBERON:0000062!1.22e-07!511;UBERON:0004732!4.87e-07!13;UBERON:0000489!7.89e-07!32 | |ontology_enrichment_uberon=UBERON:0001049!2.78e-24!57;UBERON:0005068!2.78e-24!57;UBERON:0006241!2.78e-24!57;UBERON:0007135!2.78e-24!57;UBERON:0003075!2.87e-24!86;UBERON:0007284!2.87e-24!86;UBERON:0000073!4.19e-24!94;UBERON:0001016!4.19e-24!94;UBERON:0005743!1.21e-23!86;UBERON:0007023!1.51e-23!115;UBERON:0002616!5.26e-22!59;UBERON:0002346!5.64e-22!90;UBERON:0001017!6.70e-22!82;UBERON:0000955!4.57e-19!69;UBERON:0006238!4.57e-19!69;UBERON:0003056!1.22e-17!61;UBERON:0003080!1.06e-15!42;UBERON:0004121!1.37e-15!169;UBERON:0002780!4.39e-15!41;UBERON:0001890!4.39e-15!41;UBERON:0006240!4.39e-15!41;UBERON:0000033!5.11e-15!123;UBERON:0000153!5.58e-15!129;UBERON:0007811!5.58e-15!129;UBERON:0000924!1.72e-14!173;UBERON:0006601!1.72e-14!173;UBERON:0002020!4.16e-14!34;UBERON:0003528!4.16e-14!34;UBERON:0001893!8.95e-14!34;UBERON:0002791!1.96e-13!33;UBERON:0001869!2.99e-13!32;UBERON:0000475!2.21e-12!365;UBERON:0002619!6.90e-12!22;UBERON:0000956!7.63e-12!25;UBERON:0000203!7.63e-12!25;UBERON:0001950!1.09e-10!20;UBERON:0003076!3.93e-10!15;UBERON:0003057!3.93e-10!15;UBERON:0000064!3.73e-08!219;UBERON:0004733!5.42e-08!12;UBERON:0002028!5.42e-08!12;UBERON:0007277!5.42e-08!12;UBERON:0000062!1.22e-07!511;UBERON:0004732!4.87e-07!13;UBERON:0000489!7.89e-07!32 | ||
|ontology_enrichment_uberon_v019=UBERON:0000922;2.46e-08;49 | |ontology_enrichment_uberon_v019=UBERON:0000922;2.46e-08;49 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003075,1.25e-13,82;UBERON:0007284,1.25e-13,82;UBERON:0002346,1.34e-12,86;UBERON:0010371,1.28e-11,104;UBERON:0001049,9.11e-11,56;UBERON:0005068,9.11e-11,56;UBERON:0006241,9.11e-11,56;UBERON:0007135,9.11e-11,56;UBERON:0001016,2.71e-10,89;UBERON:0004121,2.77e-09,171;UBERON:0000924,2.77e-09,171;UBERON:0006601,2.77e-09,171;UBERON:0010314,5.30e-09,132;UBERON:0003076,1.37e-08,15;UBERON:0003057,1.37e-08,15;UBERON:0001017,1.77e-08,81;UBERON:0000073,2.98e-08,53;UBERON:0002616,2.98e-08,53 | |||
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| ||
|short_description=p6@AFF3 | |short_description=p6@AFF3 | ||
}} | }} |
Latest revision as of 22:40, 15 September 2015
Short description: | p6@AFF3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_AFF3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000441400_5end |
EntrezGene: | AFF3 |
HGNC: | 6473 |
UniProt: | C9JZ66 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural plate | 1.25e-13 | 82 |
presumptive neural plate | 1.25e-13 | 82 |
neurectoderm | 1.34e-12 | 86 |
ecto-epithelium | 1.28e-11 | 104 |
neural tube | 9.11e-11 | 56 |
neural rod | 9.11e-11 | 56 |
future spinal cord | 9.11e-11 | 56 |
neural keel | 9.11e-11 | 56 |
nervous system | 2.71e-10 | 89 |
ectoderm-derived structure | 2.77e-09 | 171 |
ectoderm | 2.77e-09 | 171 |
presumptive ectoderm | 2.77e-09 | 171 |
structure with developmental contribution from neural crest | 5.30e-09 | 132 |
posterior neural tube | 1.37e-08 | 15 |
chordal neural plate | 1.37e-08 | 15 |
central nervous system | 1.77e-08 | 81 |
regional part of nervous system | 2.98e-08 | 53 |
regional part of brain | 2.98e-08 | 53 |