FFCP PHASE1:Hg19::chr4:146101304..146101326,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr4:146101304..146101326,- to FFCP PHASE1:Hg19::chr4:146101304..146101326,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=54726 | |EntrezGene=54726 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24949 | |HGNC=24949 | ||
|TSSclassifier=strong | |||
|UniProt=G3V0I6 | |UniProt=G3V0I6 | ||
|association_with_transcript=0bp_to_ENST00000447906_5end | |||
|cluster_id=chr4:146101304..146101326,- | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_3_at_OTUD4_5end | |||
|id=chr4:146101304..146101326,- | |||
|ontology_enrichment_celltype=CL:0000766!1.86e-22!76;CL:0000738!7.31e-22!140;CL:0000557!2.03e-21!71;CL:0002057!1.44e-20!42;CL:0000839!8.47e-19!70;CL:0002031!1.18e-18!124;CL:0002009!1.78e-18!65;CL:0000860!3.96e-18!45;CL:0000037!2.55e-17!172;CL:0000566!2.55e-17!172;CL:0002194!3.29e-17!63;CL:0000576!3.29e-17!63;CL:0000040!3.29e-17!63;CL:0000559!3.29e-17!63;CL:0002087!1.30e-16!119;CL:0000988!4.36e-16!182;CL:0002032!1.84e-15!165;CL:0000837!1.84e-15!165;CL:0000763!7.83e-15!112;CL:0000049!7.83e-15!112;CL:0000134!1.99e-07!358 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.52e-42;33!CL:0002057;4.52e-42;33!CL:0000473;8.82e-39;39!CL:0000234;8.82e-39;39!CL:0000576;2.13e-23;48!CL:0000766;2.84e-23;69!CL:0000840;1.60e-12;5!CL:0000738;6.56e-11;136!CL:0000451;9.69e-11;10!CL:0000763;7.31e-10;100!CL:0002087;7.57e-10;104!CL:0000990;4.72e-08;8!CL:0000988;5.75e-07;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000557,7.21e-59,67;CL:0000766,1.50e-58,72;CL:0002009,1.57e-51,61;CL:0000839,2.70e-51,66;CL:0000473,2.07e-50,48;CL:0000234,2.07e-50,48;CL:0002194,9.04e-48,59;CL:0000576,9.04e-48,59;CL:0000040,9.04e-48,59;CL:0000559,9.04e-48,59;CL:0000738,7.97e-47,136;CL:0000860,1.69e-46,42;CL:0002057,1.69e-46,42;CL:0000763,7.22e-40,108;CL:0000049,7.22e-40,108;CL:0000988,5.84e-39,177;CL:0002031,1.56e-38,120;CL:0000037,2.15e-37,168;CL:0002087,1.14e-33,115;CL:0002032,1.28e-32,161;CL:0000837,1.28e-32,161;CL:0000134,2.04e-15,354;CL:0002320,9.66e-15,361;CL:0000840,2.05e-12,5;CL:0001029,2.05e-12,5;CL:0000219,2.22e-12,386;CL:0000034,4.83e-12,441;CL:0000048,8.13e-12,427;CL:0000723,2.23e-11,433;CL:0000451,8.72e-11,10;CL:0000990,5.54e-08,8;CL:0000097,8.23e-07,5;CL:0002028,8.23e-07,5 | |||
|ontology_enrichment_development_v019=CL:0002057;7.68e-35;42!CL:0000049;1.28e-10;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.95e-18!80;UBERON:0002193!6.93e-18!112;UBERON:0002390!3.21e-17!102;UBERON:0003061!3.21e-17!102;UBERON:0001474!9.38e-17!86;UBERON:0002405!1.73e-13!115;UBERON:0004765!2.79e-13!101;UBERON:0001434!2.79e-13!101;UBERON:0002384!4.82e-07!375;UBERON:0003081!5.21e-07!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,7.02e-55,76;UBERON:0001474,8.34e-50,82;UBERON:0002390,1.74e-49,98;UBERON:0003061,1.74e-49,98;UBERON:0004765,4.35e-44,90;UBERON:0002193,1.93e-43,108;UBERON:0002405,3.38e-42,93;UBERON:0001434,3.14e-38,100;UBERON:0003081,2.31e-24,203;UBERON:0002204,2.64e-22,167;UBERON:0002384,3.98e-15,371;UBERON:0000926,1.24e-11,315;UBERON:0004120,1.24e-11,315;UBERON:0006603,1.24e-11,315 | |||
|phase1_expression=0.363356758541113,0.428201047781966,0.140954404095971,0,0.446961094427288,0,0,0,0.261185628199839,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0.313454721478088,0,0.821246550437305,0.376627918784408,0.61130724598361,0.410502947249729,0.472264687882075,1.96682138424452,3.0706351847777,2.78669021968937,0,0.30120591877825,0,0.309868802321207,0.142169232487422,2.34880351467878,34.3477153289764,17.4473669299023,17.577880527984,0,0,0,0.436194716338694,4.1566353805769,0.970336244751265,2.78914844286822,12.7462045286766,13.3173739484895,9.20615655430881,8.70946402198942,9.93225365532058,18.961012440514,16.7826017731795,29.7938270507552,1.69418105588344,3.27487380069415,6.74170453335254,7.03992952453076,11.2325159476633,14.0654167675789,1.64925650093358,3.19141852194611,4.26224750532694,12.7692064996577,37.4474248296152,24.2900677108274,4.77372463987812,11.9941071236646,8.25317609879443,13.3187890579341,33.5132648748684,30.3803891943249,0.211255286311942,1.06302149982522,0.419317291016752,0.336985893439485,0.450530678524519,0,0.285012743741249,0.19891667719909,0,0,0,0,0,0,0,0.661044872784862,0.954053754535364,1.1384259382189,0.587237189370939,2.6759125968766,1.32171328579026,12.3311883855938,0,0.983548850569165,1.17903228824749,0.616804496998528,0,0,0.473447805734733,0,0,0.589211814949674,0,0.270803863765016,0.128091319725675,0.130059347559878,0.164437904603676,0.276350017785848,0,0,0,0,0.113309342697566,0,0.34362744548263,0,0,0,0.950452044448374,0.301150238155546,0,0,0,0,0.80642697289893,1.06976078313403,1.59306844271079,0,0,0.12786256184353,0.722878304769133,0,0,0,0.486634870302636,0.378139268656271,0.443458794925128,0.351339142772504,0.0654895377488563,0,0,2.59637914923747,2.61194605948901,3.0580330919339,2.14641561874808,1.71598473234038,1.48583000531826,0.993812036833525,0,0,0.56530794192401,0,0.275118041940067,0.417989933073621,0.516833518338658,0.71153252537342,0.33472061276467,0.805658634218294,0,0.488124115096339,0.367663080345869,0.81014194788176,0.446498641420399,0,0.337834441449967,0,0,0.366403487860815,3.9534125230819,3.87780264148325,0,0,0.12663051166458,0.264818361626438,0.573673241497627,0,0,1.06748995729705,0,0,0.404132016209064,0,0,0,0,0,0,0.298897361103602,0,0.161872944368132,0.280901613404497,0,0.122834317311768,0.309977343527296,0,0.247266929278557,0,0,0,0,0,0,0.30648779579902,0.45071417671979,0.113432183160021,0,0.213557388818567,1.05965950579781,0.300091096084402,0.309157587715317,0,0.18611685633159,0.168776332241266,0.0974370051611986,0,0.184099797284599,0.323292113637624,0,0,0.169560592310488,0.386521706326594,0.545492241181669,0.573609190778008,0,0,0,0,0.252320850875628,0,0,0,0,0,0,0.236613600079688,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,1.26755034821831,0.982827216677626,0,0,0,0.171567810298526,0,0,0.201057944823262,0.277765335475589,0,0,0,0,0.352226082707465,0.866198686566443,0.462985512576611,0.570762456703795,0,0,0.492434012174795,11.7002132569619,5.64798416697167,0,0,0.425325291727159,0.358234090811393,0,0,35.9644163664039,0.352193736052904,2.90259361757081,1.72943944100354,1.38866676769018,0.063497894292169,0.763976851116555,0,0,0.205654985406647,0.300343057843917,0.285826432630578,0.224262168690721,0,0.07333828582095,0.517086863031111,0,0,0.26593811658487,1.04007436911366,0,0,0,0,0,0,0.65147236858747,0,0,0,0,0,1.2162378064119,1.00451418286425,0,0,0,0,0.289562613335158,0,0.179060963239896,0.112085143993527,3.34952292343276,1.50939302401662,1.28343036279748,0.508189248444927,1.30139853857622,0.773288812777695,0,0.637938751653163,0.749007023947182,0,0.828831026872071,0.12269149171914,0,0,0.415941723061614,0,0.157702415033935,0.117141414992713,0,0,0,0,0.553107505625109,0.0868836144680828,0,0,0.413536052245775,3.23571301227925,2.34800627167578,0,0,0,0.496215615637554,0,0,0,0,0,0,0.616838775210622,0.710246901252508,0.574890092096664,0,0.348631135379878,0,0,0.0920809889358963,0,0,0.262248829918848,0,0.462092022626489,0,0,0.316654886678627,0,0,0.215915916102139,1.54227252690289,0,0,0,0,0,0,0.261435451024901,0,0,0,0.206082023295445,0.0915694648183434,0.165018999841176,0,0,1.6068392984416,0.386682873168488,0.308097234229289,0.614014698904518,0.689182862422653,0,0.145016693914229,0.511359764496605,0.356128142586949,0.165284915360978,0.768760269460425,0.893288987462089,0.809262246844399,0,0,0,0.616067160352178,0,0,0.18532421910392,0.429374660225974,0,0,0,0,0.42793898803392,0,0.78494864019923,0,0,0,0,3.17020642346017,0,0,1.21856744815642,3.16950440270266,0,0.282810863907425,0,0,0,0,0,0,0.811641507850816,0.6196469961995,0,0,0.0982490410131212,0,0,0.211107635297664,0,0.379473173765715,0.349934720244983,0.0962221127255121,0.670302275535787,0,0.0941438007767792,0,0,0,1.1486170010348,0.507447609232169,0.764637207142375,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0.213425530045242,0,0,0.5745161103971,0.635020748171649,0,0.280797178113459,0,0.156679895773023,0,0.169291777801603,0,0,0,0,0,0,0,0,0.835218521685727,0,0,0,0,0,0.439524537815682,0.121360521749513,0.445773537109913,0,0,1.18785872333055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| ||
|short_description=p3@OTUD4 | |||
}} | }} |
Latest revision as of 22:53, 15 September 2015
Short description: | p3@OTUD4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_OTUD4_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | 0bp_to_ENST00000447906_5end |
EntrezGene: | OTUD4 |
HGNC: | 24949 |
UniProt: | G3V0I6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 7.02e-55 | 76 |
bone element | 8.34e-50 | 82 |
hematopoietic system | 1.74e-49 | 98 |
blood island | 1.74e-49 | 98 |
skeletal element | 4.35e-44 | 90 |
hemolymphoid system | 1.93e-43 | 108 |
immune system | 3.38e-42 | 93 |
skeletal system | 3.14e-38 | 100 |
lateral plate mesoderm | 2.31e-24 | 203 |
musculoskeletal system | 2.64e-22 | 167 |
connective tissue | 3.98e-15 | 371 |
mesoderm | 1.24e-11 | 315 |
mesoderm-derived structure | 1.24e-11 | 315 |
presumptive mesoderm | 1.24e-11 | 315 |