FFCP PHASE1:Hg19::chr14:74226747..74226779,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr14:74226747..74226779,-
|short_description=p3@C14orf43
|description=CAGE_peak_3_at_C14orf43_5end
|association_with_transcript=221bp_to_ENST00000286523,ENST00...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=91748 | |EntrezGene=91748 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19853 | |HGNC=19853 | ||
|TSSclassifier=strong | |||
|UniProt=Q6PJG2,F6RU81 | |UniProt=Q6PJG2,F6RU81 | ||
|association_with_transcript=221bp_to_ENST00000286523,ENST00000435371,NM_194278,uc001xot.2_5end | |||
|cluster_id=chr14:74226747..74226779,- | |||
|coexpression_cluster_id=C3449 | |||
|description=CAGE_peak_3_at_C14orf43_5end | |||
|id=chr14:74226747..74226779,- | |||
|ontology_enrichment_celltype=CL:0002057!4.01e-22!42;CL:0000860!6.21e-20!45;CL:0000766!1.26e-18!76;CL:0000557!1.62e-15!71;CL:0002009!1.70e-14!65;CL:0002194!8.68e-14!63;CL:0000576!8.68e-14!63;CL:0000040!8.68e-14!63;CL:0000559!8.68e-14!63;CL:0000839!8.12e-13!70;CL:0002371!1.20e-11!591;CL:0000144!1.57e-10!625;CL:0000012!2.04e-09!682;CL:0000763!5.41e-09!112;CL:0000049!5.41e-09!112;CL:0000548!6.48e-09!679;CL:0000004!6.48e-09!679;CL:0000255!6.48e-09!679;CL:0000063!5.12e-08!578 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.02e-17;33!CL:0002057;1.02e-17;33!CL:0000473;7.42e-14;39!CL:0000234;7.42e-14;39!CL:0000576;2.12e-12;48!CL:0000766;1.79e-10;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.53e-22,42;CL:0002057,3.53e-22,42;CL:0000473,9.67e-21,48;CL:0000234,9.67e-21,48;CL:0000766,2.75e-20,72;CL:0000557,5.06e-17,67;CL:0002009,5.06e-16,61;CL:0002194,2.73e-15,59;CL:0000576,2.73e-15,59;CL:0000040,2.73e-15,59;CL:0000559,2.73e-15,59;CL:0000839,4.62e-14,66;CL:0000763,1.37e-09,108;CL:0000049,1.37e-09,108 | |||
|ontology_enrichment_development_v019=CL:0002057;2.35e-16;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!4.58e-15!80;UBERON:0001474!1.42e-13!86;UBERON:0004765!7.84e-13!101;UBERON:0001434!7.84e-13!101;UBERON:0002204!1.43e-12!167;UBERON:0000467!3.26e-10!625;UBERON:0003081!3.99e-10!216;UBERON:0000480!4.76e-10!626;UBERON:0002390!7.06e-10!102;UBERON:0003061!7.06e-10!102;UBERON:0002405!2.02e-09!115;UBERON:0002193!1.15e-08!112;UBERON:0000926!2.02e-08!448;UBERON:0004120!2.02e-08!448;UBERON:0006603!2.02e-08!448;UBERON:0000468!4.40e-08!659;UBERON:0002050!5.56e-08!605;UBERON:0005423!5.56e-08!605;UBERON:0000923!6.26e-08!604;UBERON:0005291!6.26e-08!604;UBERON:0006598!6.26e-08!604;UBERON:0002532!6.26e-08!604;UBERON:0000062!1.54e-07!511 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.12e-16,76;UBERON:0004765,6.63e-15,90;UBERON:0001474,9.24e-15,82;UBERON:0001434,1.45e-14,100;UBERON:0002204,3.80e-14,167;UBERON:0002405,6.42e-11,93;UBERON:0002390,1.61e-10,98;UBERON:0003061,1.61e-10,98;UBERON:0003081,7.40e-10,203;UBERON:0002193,3.35e-09,108;UBERON:0000926,9.53e-08,315;UBERON:0004120,9.53e-08,315;UBERON:0006603,9.53e-08,315;UBERON:0000923,3.96e-07,560;UBERON:0010316,3.96e-07,560;UBERON:0005291,3.96e-07,560;UBERON:0006598,3.96e-07,560;UBERON:0010317,3.96e-07,560;UBERON:0002532,3.96e-07,560;UBERON:0005423,4.79e-07,581;UBERON:0002050,5.03e-07,564 | |||
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| ||
|short_description=p3@C14orf43 | |||
}} | }} |
Latest revision as of 23:40, 15 September 2015
Short description: | p3@C14orf43 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_C14orf43_5end |
Coexpression cluster: | C3449_Eosinophils_CD14_Neutrophils_CD34_granulocyte_Basophils_Mast |
Association with transcript: | 221bp_to_ENST00000286523, ENST00000435371, NM_194278, uc001xot.2_5end |
EntrezGene: | C14orf43 |
HGNC: | 19853 |
UniProt: | Q6PJG2F6RU81 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.53e-22 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.53e-22 | 42 |
defensive cell | 9.67e-21 | 48 |
phagocyte | 9.67e-21 | 48 |
myeloid leukocyte | 2.75e-20 | 72 |
granulocyte monocyte progenitor cell | 5.06e-17 | 67 |
macrophage dendritic cell progenitor | 5.06e-16 | 61 |
monopoietic cell | 2.73e-15 | 59 |
monocyte | 2.73e-15 | 59 |
monoblast | 2.73e-15 | 59 |
promonocyte | 2.73e-15 | 59 |
myeloid lineage restricted progenitor cell | 4.62e-14 | 66 |
myeloid cell | 1.37e-09 | 108 |
common myeloid progenitor | 1.37e-09 | 108 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.12e-16 | 76 |
skeletal element | 6.63e-15 | 90 |
bone element | 9.24e-15 | 82 |
skeletal system | 1.45e-14 | 100 |
musculoskeletal system | 3.80e-14 | 167 |
immune system | 6.42e-11 | 93 |
hematopoietic system | 1.61e-10 | 98 |
blood island | 1.61e-10 | 98 |
lateral plate mesoderm | 7.40e-10 | 203 |
hemolymphoid system | 3.35e-09 | 108 |
mesoderm | 9.53e-08 | 315 |
mesoderm-derived structure | 9.53e-08 | 315 |
presumptive mesoderm | 9.53e-08 | 315 |
germ layer | 3.96e-07 | 560 |
germ layer / neural crest | 3.96e-07 | 560 |
embryonic tissue | 3.96e-07 | 560 |
presumptive structure | 3.96e-07 | 560 |
germ layer / neural crest derived structure | 3.96e-07 | 560 |
epiblast (generic) | 3.96e-07 | 560 |
developing anatomical structure | 4.79e-07 | 581 |
embryonic structure | 5.03e-07 | 564 |