FFCP PHASE1:Hg19::chr11:118175659..118175669,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=916 | |EntrezGene=916 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1674 | |HGNC=1674 | ||
|TSSclassifier=strong | |||
|UniProt=E9PSH8 | |UniProt=E9PSH8 | ||
|association_with_transcript=45bp_to_ENST00000528600_5end | |association_with_transcript=45bp_to_ENST00000528600_5end | ||
|cluster_id=chr11:118175659..118175669,+ | |||
|coexpression_cluster_id=C18 | |coexpression_cluster_id=C18 | ||
|description=CAGE_peak_5_at_CD3E_5end | |description=CAGE_peak_5_at_CD3E_5end | ||
|id=chr11:118175659..118175669,+ | |id=chr11:118175659..118175669,+ | ||
|ontology_enrichment_celltype=CL:0000791!1.17e-48!18;CL:0000789!1.17e-48!18;CL:0002420!1.17e-48!18;CL:0002419!1.17e-48!18;CL:0000790!1.17e-48!18;CL:0000084!1.19e-46!25;CL:0000827!1.19e-46!25;CL:0000625!2.72e-30!11;CL:0000838!3.94e-26!52;CL:0000542!1.64e-25!53;CL:0000051!1.64e-25!53;CL:0000624!2.78e-17!6;CL:0002087!6.86e-16!119;CL:0000738!1.79e-15!140;CL:0002031!1.19e-11!124;CL:0000037!5.33e-11!172;CL:0000566!5.33e-11!172;CL:0000988!6.13e-10!182;CL:0000898!1.39e-09!3;CL:0000623!1.97e-09!3;CL:0000825!1.97e-09!3;CL:0002032!2.92e-09!165;CL:0000837!2.92e-09!165;CL:0000842!8.09e-09!3;CL:0000767!1.19e-08!3;CL:0000815!4.84e-07!2;CL:0000792!4.84e-07!2;CL:0002677!4.84e-07!2;CL:0000893!8.22e-07!2;CL:0002489!8.22e-07!2;CL:0000809!8.22e-07!2;CL:0000808!8.22e-07!2;CL:0000894!8.22e-07!2;CL:0000806!8.22e-07!2;CL:0000807!8.22e-07!2;CL:0000805!8.22e-07!2;CL:0002425!8.22e-07!2 | |ontology_enrichment_celltype=CL:0000791!1.17e-48!18;CL:0000789!1.17e-48!18;CL:0002420!1.17e-48!18;CL:0002419!1.17e-48!18;CL:0000790!1.17e-48!18;CL:0000084!1.19e-46!25;CL:0000827!1.19e-46!25;CL:0000625!2.72e-30!11;CL:0000838!3.94e-26!52;CL:0000542!1.64e-25!53;CL:0000051!1.64e-25!53;CL:0000624!2.78e-17!6;CL:0002087!6.86e-16!119;CL:0000738!1.79e-15!140;CL:0002031!1.19e-11!124;CL:0000037!5.33e-11!172;CL:0000566!5.33e-11!172;CL:0000988!6.13e-10!182;CL:0000898!1.39e-09!3;CL:0000623!1.97e-09!3;CL:0000825!1.97e-09!3;CL:0002032!2.92e-09!165;CL:0000837!2.92e-09!165;CL:0000842!8.09e-09!3;CL:0000767!1.19e-08!3;CL:0000815!4.84e-07!2;CL:0000792!4.84e-07!2;CL:0002677!4.84e-07!2;CL:0000893!8.22e-07!2;CL:0002489!8.22e-07!2;CL:0000809!8.22e-07!2;CL:0000808!8.22e-07!2;CL:0000894!8.22e-07!2;CL:0000806!8.22e-07!2;CL:0000807!8.22e-07!2;CL:0000805!8.22e-07!2;CL:0002425!8.22e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0000791;1.19e-63;18!CL:0000789;1.19e-63;18!CL:0002419;1.19e-63;18!CL:0000084;8.91e-57;25!CL:0000625;6.01e-37;11!CL:0000624;1.70e-24;6!CL:0000542;2.20e-16;53!CL:0000898;2.83e-13;3!CL:0000623;5.58e-13;3!CL:0000815;1.62e-09;2!CL:0000792;1.62e-09;2!CL:0002677;1.62e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,6.89e-64,18;CL:0000789,6.89e-64,18;CL:0002420,6.89e-64,18;CL:0002419,6.89e-64,18;CL:0000790,6.89e-64,18;CL:0000084,6.13e-57,25;CL:0000827,6.13e-57,25;CL:0000625,8.77e-37,11;CL:0000838,3.32e-34,52;CL:0000542,1.85e-33,53;CL:0000051,1.85e-33,53;CL:0000624,8.31e-25,6;CL:0002087,8.22e-14,115;CL:0000898,2.06e-13,3;CL:0000623,3.44e-13,3;CL:0000825,3.44e-13,3;CL:0000738,4.44e-12,136;CL:0002031,9.47e-12,120;CL:0000815,1.15e-09,2;CL:0000792,1.15e-09,2;CL:0002677,1.15e-09,2;CL:0000893,2.49e-09,2;CL:0002489,2.49e-09,2;CL:0000809,2.49e-09,2;CL:0000808,2.49e-09,2;CL:0000894,2.49e-09,2;CL:0000806,2.49e-09,2;CL:0000807,2.49e-09,2;CL:0000805,2.49e-09,2;CL:0002425,2.49e-09,2;CL:0000037,8.85e-09,168;CL:0002032,1.89e-08,161;CL:0000837,1.89e-08,161;CL:0000988,4.51e-08,177 | |||
|ontology_enrichment_development_v019=CL:0000790;1.19e-63;18!CL:0000051;2.20e-16;53!CL:0002425;3.21e-09;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!4.40e-14!7;UBERON:0000178!1.37e-13!15;UBERON:0000179!1.37e-13!15;UBERON:0000463!1.37e-13!15;UBERON:0002370!3.11e-12!4;UBERON:0005058!3.11e-12!4;UBERON:0009113!3.11e-12!4;UBERON:0003295!3.11e-12!4;UBERON:0005562!3.11e-12!4;UBERON:0003351!3.79e-08!6;UBERON:0001042!4.32e-07!10;UBERON:0009145!4.32e-07!10 | |ontology_enrichment_uberon=UBERON:0004177!4.40e-14!7;UBERON:0000178!1.37e-13!15;UBERON:0000179!1.37e-13!15;UBERON:0000463!1.37e-13!15;UBERON:0002370!3.11e-12!4;UBERON:0005058!3.11e-12!4;UBERON:0009113!3.11e-12!4;UBERON:0003295!3.11e-12!4;UBERON:0005562!3.11e-12!4;UBERON:0003351!3.79e-08!6;UBERON:0001042!4.32e-07!10;UBERON:0009145!4.32e-07!10 | ||
|ontology_enrichment_uberon_v019=UBERON:0002370;1.12e-09;2!UBERON:0005058;1.12e-09;2!UBERON:0009113;1.12e-09;2!UBERON:0000178;7.26e-07;15!UBERON:0000179;7.26e-07;15!UBERON:0000463;7.26e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,2.49e-17,4;UBERON:0005058,2.49e-17,4;UBERON:0009113,2.49e-17,4;UBERON:0003295,2.49e-17,4;UBERON:0005562,2.49e-17,4;UBERON:0003351,1.35e-11,6;UBERON:0004177,5.92e-10,7;UBERON:0005057,5.92e-10,7;UBERON:0000974,5.51e-07,10;UBERON:0003408,5.51e-07,10;UBERON:0001042,5.51e-07,10;UBERON:0009145,5.51e-07,10 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,1.53531759238885,0.154816123316076,0,0,0,0,0,0,0,0.200544447470142,0.434021741431704,0,0,0,0,0,0,0,0,0,0,0,0,0,0.645484683583826,0,0,0,0.224723484445085,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96709770113833,1.57204305099666,1.43921049299656,4.17966238476695,1.95553359980154,2.8406868344084,5.84480185223734,4.2335973616366,2.3568472597987,4.2091439970888,3.24964636518019,3.0741916734162,3.64166173167659,2.30213066445147,1.65810010671509,3.47763702882063,3.26230438956533,2.67540828089713,1.04535523804977,4.64568305060021,1.53288197440768,2.40539211837841,4.30133476433155,3.18565414324097,0.651083453856419,1.90090408889675,2.55977702432214,2.04778577847069,2.49861453104692,1.4206635122641,1.64225599384209,2.21767417547206,1.06976078313403,1.30341963494519,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.90544744788996,1.97030760201927,1.94064817373566,1.15508732651774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03384013061444,0.647142602455851,0.960548020230999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,1.01489521846434,0.764637207142375,0,1.19115887728894,0.822724546172388,1.29694662238543,0,5.55187623405989,0,0,0,0,0,4.48193613095009,2.07254154547469,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.39997479170986,0,0,0,0,0,0,0,0,0,0,0.169732529954025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281951753939561,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,3.10026767212829,1.67601728598816,0,0,0,0,0,0.673520530145875,0.0717222053926763,0,0,0,0,0,0,0,0,0,0.805095174364105,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,1.53531759238885,0.154816123316076,0,0,0,0,0,0,0,0.200544447470142,0.434021741431704,0,0,0,0,0,0,0,0,0,0,0,0,0,0.645484683583826,0,0,0,0.224723484445085,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96709770113833,1.57204305099666,1.43921049299656,4.17966238476695,1.95553359980154,2.8406868344084,5.84480185223734,4.2335973616366,2.3568472597987,4.2091439970888,3.24964636518019,3.0741916734162,3.64166173167659,2.30213066445147,1.65810010671509,3.47763702882063,3.26230438956533,2.67540828089713,1.04535523804977,4.64568305060021,1.53288197440768,2.40539211837841,4.30133476433155,3.18565414324097,0.651083453856419,1.90090408889675,2.55977702432214,2.04778577847069,2.49861453104692,1.4206635122641,1.64225599384209,2.21767417547206,1.06976078313403,1.30341963494519,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.90544744788996,1.97030760201927,1.94064817373566,1.15508732651774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03384013061444,0.647142602455851,0.960548020230999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,1.01489521846434,0.764637207142375,0,1.19115887728894,0.822724546172388,1.29694662238543,0,5.55187623405989,0,0,0,0,0,4.48193613095009,2.07254154547469,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.39997479170986,0,0,0,0,0,0,0,0,0,0,0.169732529954025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281951753939561,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,3.10026767212829,1.67601728598816,0,0,0,0,0,0.673520530145875,0.0717222053926763,0,0,0,0,0,0,0,0,0,0.805095174364105,0 | ||
|short_description=p5@CD3E | |short_description=p5@CD3E | ||
}} | }} |
Latest revision as of 23:44, 15 September 2015
Short description: | p5@CD3E |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_CD3E_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | 45bp_to_ENST00000528600_5end |
EntrezGene: | CD3E |
HGNC: | 1674 |
UniProt: | E9PSH8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymus | 2.49e-17 | 4 |
hemolymphoid system gland | 2.49e-17 | 4 |
thymic region | 2.49e-17 | 4 |
pharyngeal gland | 2.49e-17 | 4 |
thymus primordium | 2.49e-17 | 4 |
pharyngeal epithelium | 1.35e-11 | 6 |
hemopoietic organ | 5.92e-10 | 7 |
immune organ | 5.92e-10 | 7 |
neck | 5.51e-07 | 10 |
gland of gut | 5.51e-07 | 10 |
chordate pharynx | 5.51e-07 | 10 |
pharyngeal region of foregut | 5.51e-07 | 10 |