FFCP PHASE1:Hg19::chr10:105049488..105049499,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9118 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=6057 | |||
|TSSclassifier=strong | |||
|UniProt=Q96J72 | |||
|association_with_transcript=135bp_to_AY034000_5end | |||
|cluster_id=chr10:105049488..105049499,+ | |||
|coexpression_cluster_id=C16 | |||
|description=CAGE_peak_8_at_INA_5end | |||
|id=chr10:105049488..105049499,+ | |||
|ontology_enrichment_celltype=CL:0000540!2.88e-09!6;CL:0000031!2.88e-09!6;CL:0000404!2.88e-09!6;CL:0000047!8.34e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000540;8.90e-22;6!CL:0000404;8.90e-22;6!CL:0002553;2.75e-15;1!CL:0002319;1.24e-08;25!CL:0000123;2.67e-08;2!CL:0000242;2.67e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,7.19e-22,6;CL:0000031,7.19e-22,6;CL:0000404,7.19e-22,6;CL:0000047,1.41e-16,8;CL:0002553,2.75e-15,1;CL:0002319,1.14e-08,25;CL:0000242,2.48e-08,2 | |||
|ontology_enrichment_development_v019=CL:0000031;8.90e-22;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!2.78e-38!94;UBERON:0001016!2.78e-38!94;UBERON:0001017!3.02e-38!82;UBERON:0001049!5.17e-37!57;UBERON:0005068!5.17e-37!57;UBERON:0006241!5.17e-37!57;UBERON:0007135!5.17e-37!57;UBERON:0005743!7.10e-36!86;UBERON:0002616!6.68e-31!59;UBERON:0000955!1.03e-29!69;UBERON:0006238!1.03e-29!69;UBERON:0002780!3.23e-29!41;UBERON:0001890!3.23e-29!41;UBERON:0006240!3.23e-29!41;UBERON:0002619!3.41e-29!22;UBERON:0001950!4.81e-29!20;UBERON:0002020!9.48e-29!34;UBERON:0003528!9.48e-29!34;UBERON:0003080!2.44e-28!42;UBERON:0001893!2.61e-28!34;UBERON:0001869!4.11e-28!32;UBERON:0002791!8.56e-27!33;UBERON:0000956!3.85e-25!25;UBERON:0000203!3.85e-25!25;UBERON:0003075!6.87e-24!86;UBERON:0007284!6.87e-24!86;UBERON:0004121!2.05e-22!169;UBERON:0002346!2.44e-22!90;UBERON:0000924!1.51e-21!173;UBERON:0006601!1.51e-21!173;UBERON:0003056!1.45e-18!61;UBERON:0000033!4.53e-17!123;UBERON:0000153!9.42e-16!129;UBERON:0007811!9.42e-16!129;UBERON:0007023!7.56e-15!115;UBERON:0000200!2.43e-12!6;UBERON:0002021!6.24e-11!5;UBERON:0003076!1.12e-09!15;UBERON:0003057!1.12e-09!15;UBERON:0001871!3.51e-09!7;UBERON:0002298!9.39e-09!8;UBERON:0000025!2.59e-08!194;UBERON:0004733!1.55e-07!12;UBERON:0002028!1.55e-07!12;UBERON:0007277!1.55e-07!12;UBERON:0001872!2.19e-07!5;UBERON:0000988!4.14e-07!3;UBERON:0000064!4.94e-07!219;UBERON:0004732!7.26e-07!13;UBERON:0002771!7.32e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0002021;2.45e-26;5!UBERON:0001950;2.29e-24;20!UBERON:0002619;3.10e-22;22!UBERON:0000956;1.19e-19;25!UBERON:0000203;1.19e-19;25!UBERON:0002791;4.30e-15;32!UBERON:0001869;5.36e-15;32!UBERON:0001893;4.31e-13;34!UBERON:0003528;1.71e-11;34!UBERON:0002020;1.71e-11;34!UBERON:0002780;1.20e-09;41!UBERON:0001890;1.20e-09;41!UBERON:0001871;2.98e-09;6!UBERON:0002771;1.20e-08;2!UBERON:0000922;1.39e-08;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,2.79e-26,5;UBERON:0001950,2.44e-24,20;UBERON:0002619,3.28e-22,22;UBERON:0000956,1.25e-19,25;UBERON:0000203,1.25e-19,25;UBERON:0002791,2.02e-15,32;UBERON:0001869,2.02e-15,32;UBERON:0003528,1.58e-14,34;UBERON:0002020,1.58e-14,34;UBERON:0001893,1.58e-14,34;UBERON:0001017,4.40e-13,81;UBERON:0002780,4.59e-12,41;UBERON:0001890,4.59e-12,41;UBERON:0003080,4.59e-12,41;UBERON:0006240,4.59e-12,41;UBERON:0001016,1.03e-11,89;UBERON:0000073,2.55e-09,53;UBERON:0002616,2.55e-09,53;UBERON:0001871,2.92e-09,6;UBERON:0001049,8.20e-09,56;UBERON:0005068,8.20e-09,56;UBERON:0006241,8.20e-09,56;UBERON:0007135,8.20e-09,56;UBERON:0002771,1.20e-08,2;UBERON:0003056,4.48e-08,61;UBERON:0004121,3.86e-07,171;UBERON:0000924,3.86e-07,171;UBERON:0006601,3.86e-07,171;UBERON:0000955,4.10e-07,68;UBERON:0006238,4.10e-07,68 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602694528023977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0.494533858557114,0,0,0,0.125118519871964,0,0,0.30648779579902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355009592516614,0,0,0,0,0,0.121973706129595,0,0.116193942869518,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0.773288812777695,2.84777651068393,1.91381625495949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164254312027618,0,0,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0.247528499761764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0,0.994147647766298,0,0,0,0,0,0,0.251932747854276,0,0,0.311039587661807,0,0,0,0,0,0,0,0.649376687132959,0,0,0,0,0,0,0,0.689486746482929,0,0.347249989866585,0,0.361789315876224,0,0,0.591095237907095,0.438770794307945,0,0,0,0,0,0.179515288819544,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0.937057782901357,0,0,0,0,0,3.67287313956588,0,0,0.207376382794494,0,0,0,0,0,0.416024019039416,0.520679215005393,0,0,0,0.343972064943233,0,0,0,0,0.0882561266915003,1.58186518546373,0,0,0.443175571691151,0.391102765469606,0,0,0,0,0,0.343189995723929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399358000997982,0,0,0,0,0,0,0,0.0674035438541849,0,0,0,0.408610218334727,0.160753148465019,0,2.49264202817511,0,0,0.303747783290123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0.92562821219883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,10.9823638411767,0.3755727921195,0.573409195690071,0.332787154610557,0.124192805882767,0.138348634936231,0,0,0,0,1.87333962322753,0.724605143054126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0.19998739585493,0,0,0,0,0,0,0.127894371303652,0.431299245586727,0.157265941855896,0.764467467344097,0,0,0,0,0,0,1.60114149657094,0,0,0.192687675289379,2.8339315265117,0.159633859057151,2.2562800066483,4.28521883576921,0.276629009856872,0.322951291263702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.337687923091973,0.781078098613847,0,0.380494861163441,3.28184885410932,0,0,0,0,0.535701835878287,0,0,0.227662191351298,0,0,0,0.747667062745149,0.591954962065642,0.118193840883968,0,0,0.942693539496011,0,0,0,0,0,0.158013611732727,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0.467878926924211,0,0.237840181555137,0,0.109940516745429,0.150962843566674,0,0,0.940634592723046,0,0,0.392616934229891,0,0.8453114551668,0,0,0,0,0,0,0,0,0,0,0,0.271965960763659,4.36350690340377,0.5290268405154,0,0,0,0,0.109265571963696,0,0.101988829741982,0,0.275684698604535,1.25353769646188,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0,0,0.0673520530145875,0,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | |||
|short_description=p8@INA | |||
}} |
Latest revision as of 03:26, 16 September 2015
Short description: | p8@INA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_INA_5end |
Coexpression cluster: | C16_medial_amygdala_occipital_parietal_olfactory_putamen_brain |
Association with transcript: | 135bp_to_AY034000_5end |
EntrezGene: | INA |
HGNC: | 6057 |
UniProt: | Q96J72 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 7.19e-22 | 6 |
neuroblast | 7.19e-22 | 6 |
electrically signaling cell | 7.19e-22 | 6 |
neuronal stem cell | 1.41e-16 | 8 |
lung fibroblast | 2.75e-15 | 1 |
neural cell | 1.14e-08 | 25 |
Merkel cell | 2.48e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
occipital lobe | 2.79e-26 | 5 |
neocortex | 2.44e-24 | 20 |
regional part of cerebral cortex | 3.28e-22 | 22 |
cerebral cortex | 1.25e-19 | 25 |
pallium | 1.25e-19 | 25 |
regional part of telencephalon | 2.02e-15 | 32 |
cerebral hemisphere | 2.02e-15 | 32 |
brain grey matter | 1.58e-14 | 34 |
gray matter | 1.58e-14 | 34 |
telencephalon | 1.58e-14 | 34 |
central nervous system | 4.40e-13 | 81 |
regional part of forebrain | 4.59e-12 | 41 |
forebrain | 4.59e-12 | 41 |
anterior neural tube | 4.59e-12 | 41 |
future forebrain | 4.59e-12 | 41 |
nervous system | 1.03e-11 | 89 |
regional part of nervous system | 2.55e-09 | 53 |
regional part of brain | 2.55e-09 | 53 |
temporal lobe | 2.92e-09 | 6 |
neural tube | 8.20e-09 | 56 |
neural rod | 8.20e-09 | 56 |
future spinal cord | 8.20e-09 | 56 |
neural keel | 8.20e-09 | 56 |
middle temporal gyrus | 1.20e-08 | 2 |
pre-chordal neural plate | 4.48e-08 | 61 |
ectoderm-derived structure | 3.86e-07 | 171 |
ectoderm | 3.86e-07 | 171 |
presumptive ectoderm | 3.86e-07 | 171 |
brain | 4.10e-07 | 68 |
future brain | 4.10e-07 | 68 |