FFCP PHASE1:Hg19::chr7:129251614..129251630,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr7:129251614..129251630,+
|short_description=p2@NRF1
|description=CAGE_peak_2_at_NRF1_5end
|association_with_transcript=17bp_to_ENST00000223190,ENST0000031196...") |
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(12 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4899 | |EntrezGene=4899 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7996 | |HGNC=7996 | ||
|TSSclassifier=strong | |||
|UniProt=Q16656,Q96AN2 | |UniProt=Q16656,Q96AN2 | ||
|association_with_transcript=17bp_to_ENST00000223190,ENST00000311967_5end | |||
|cluster_id=chr7:129251614..129251630,+ | |||
|description=CAGE_peak_2_at_NRF1_5end | |||
|id=chr7:129251614..129251630,+ | |||
|ontology_enrichment_celltype=CL:0000037!4.41e-32!172;CL:0000566!4.41e-32!172;CL:0000988!6.43e-30!182;CL:0002032!5.45e-29!165;CL:0000837!5.45e-29!165;CL:0000738!3.04e-27!140;CL:0002031!7.17e-25!124;CL:0002087!7.85e-25!119;CL:0000763!4.10e-16!112;CL:0000049!4.10e-16!112;CL:0002057!1.10e-13!42;CL:0000557!6.53e-13!71;CL:0000860!8.03e-13!45;CL:0000542!1.67e-12!53;CL:0000051!1.67e-12!53;CL:0002009!2.49e-12!65;CL:0000838!2.94e-12!52;CL:0000839!8.07e-12!70;CL:0002194!2.70e-11!63;CL:0000576!2.70e-11!63;CL:0000040!2.70e-11!63;CL:0000559!2.70e-11!63;CL:0000766!4.67e-11!76;CL:0000084!7.82e-09!25;CL:0000827!7.82e-09!25;CL:0000791!7.42e-07!18;CL:0000789!7.42e-07!18;CL:0002420!7.42e-07!18;CL:0002419!7.42e-07!18;CL:0000790!7.42e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.14e-13;33!CL:0002057;2.14e-13;33!CL:0000084;2.83e-10;25!CL:0000473;1.21e-09;39!CL:0000234;1.21e-09;39!CL:0000576;1.51e-09;48!CL:0002087;1.58e-09;104!CL:0000542;3.68e-08;53!CL:0000791;1.07e-07;18!CL:0000789;1.07e-07;18!CL:0002419;1.07e-07;18!CL:0000766;3.09e-07;69!CL:0000738;3.97e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,1.07e-35,168;CL:0000988,1.93e-33,177;CL:0002032,2.37e-32,161;CL:0000837,2.37e-32,161;CL:0000738,2.37e-30,136;CL:0002031,3.91e-27,120;CL:0002087,3.95e-27,115;CL:0000763,1.72e-18,108;CL:0000049,1.72e-18,108;CL:0000557,2.04e-14,67;CL:0000860,4.81e-14,42;CL:0002057,4.81e-14,42;CL:0002009,7.76e-14,61;CL:0000839,3.36e-13,66;CL:0000542,3.88e-13,53;CL:0000051,3.88e-13,53;CL:0000473,5.80e-13,48;CL:0000234,5.80e-13,48;CL:0000766,6.74e-13,72;CL:0000838,7.05e-13,52;CL:0002194,1.08e-12,59;CL:0000576,1.08e-12,59;CL:0000040,1.08e-12,59;CL:0000559,1.08e-12,59;CL:0000084,1.52e-09,25;CL:0000827,1.52e-09,25;CL:0000791,1.86e-07,18;CL:0000789,1.86e-07,18;CL:0002420,1.86e-07,18;CL:0002419,1.86e-07,18;CL:0000790,1.86e-07,18 | |||
|ontology_enrichment_development_v019=CL:0002057;3.85e-11;42!CL:0000051;3.68e-08;53!CL:0000790;1.07e-07;18 | |||
|ontology_enrichment_disease=DOID:2531!1.28e-09!51;DOID:0060083!1.28e-09!51;DOID:1240!1.22e-07!39 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:2531,2.04e-10,51;DOID:0060083,2.04e-10,51;DOID:1240,3.07e-08,39 | |||
|ontology_enrichment_uberon=UBERON:0002390!6.24e-14!102;UBERON:0003061!6.24e-14!102;UBERON:0002193!2.17e-11!112;UBERON:0001474!2.31e-11!86;UBERON:0002371!4.14e-11!80;UBERON:0004765!5.09e-08!101;UBERON:0001434!5.09e-08!101;UBERON:0002405!1.05e-07!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.21e-15,98;UBERON:0003061,1.21e-15,98;UBERON:0001474,5.06e-13,82;UBERON:0002371,1.04e-12,76;UBERON:0002193,1.77e-12,108;UBERON:0002405,5.70e-12,93;UBERON:0004765,1.20e-09,90;UBERON:0001434,5.25e-08,100 | |||
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| ||
|short_description=p2@NRF1 | |||
}} | }} |
Latest revision as of 05:48, 16 September 2015
Short description: | p2@NRF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_NRF1_5end |
Coexpression cluster: | NA |
Association with transcript: | 17bp_to_ENST00000223190, ENST00000311967_5end |
EntrezGene: | NRF1 |
HGNC: | 7996 |
UniProt: | Q16656Q96AN2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.21e-15 | 98 |
blood island | 1.21e-15 | 98 |
bone element | 5.06e-13 | 82 |
bone marrow | 1.04e-12 | 76 |
hemolymphoid system | 1.77e-12 | 108 |
immune system | 5.70e-12 | 93 |
skeletal element | 1.20e-09 | 90 |
skeletal system | 5.25e-08 | 100 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 2.04e-10 | 51 |
immune system cancer | 2.04e-10 | 51 |
leukemia | 3.07e-08 | 39 |