FFCP PHASE1:Hg19::chr7:129592700..129592828,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7328 | |EntrezGene=7328 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12484 | |HGNC=12484 | ||
|TSSclassifier=strong | |||
|UniProt=P62256,C9JZY6,A4D1L5,A4D1L6,Q7Z6F4 | |UniProt=P62256,C9JZY6,A4D1L5,A4D1L6,Q7Z6F4 | ||
|association_with_transcript=0bp_to_ENST00000355621,ENST00000472396,NM_001202498,NM_003344,NM_182697,uc003vpf.1,uc003vpg.1_5end | |association_with_transcript=0bp_to_ENST00000355621,ENST00000472396,NM_001202498,NM_003344,NM_182697,uc003vpf.1,uc003vpg.1_5end | ||
|cluster_id=chr7:129592700..129592828,- | |||
|description=CAGE_peak_1_at_UBE2H_5end | |description=CAGE_peak_1_at_UBE2H_5end | ||
|id=chr7:129592700..129592828,- | |id=chr7:129592700..129592828,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!1.00e-14!659;UBERON:0007023!1.36e-14!115;UBERON:0004111!3.36e-14!241;UBERON:0000480!1.71e-13!626;UBERON:0000467!2.42e-13!625;UBERON:0000477!9.17e-13!286;UBERON:0000033!8.50e-12!123;UBERON:0000922!1.61e-11!612;UBERON:0000153!2.44e-11!129;UBERON:0007811!2.44e-11!129;UBERON:0002050!4.13e-11!605;UBERON:0005423!4.13e-11!605;UBERON:0000923!4.53e-11!604;UBERON:0005291!4.53e-11!604;UBERON:0006598!4.53e-11!604;UBERON:0002532!4.53e-11!604;UBERON:0000475!7.51e-09!365;UBERON:0003075!7.99e-09!86;UBERON:0007284!7.99e-09!86;UBERON:0000025!1.60e-08!194;UBERON:0000483!1.64e-08!309;UBERON:0000119!3.39e-08!312;UBERON:0000062!1.07e-07!511;UBERON:0004121!1.30e-07!169;UBERON:0002346!2.38e-07!90;UBERON:0002616!2.67e-07!59;UBERON:0001009!3.31e-07!113;UBERON:0004535!6.52e-07!110 | |ontology_enrichment_uberon=UBERON:0000468!1.00e-14!659;UBERON:0007023!1.36e-14!115;UBERON:0004111!3.36e-14!241;UBERON:0000480!1.71e-13!626;UBERON:0000467!2.42e-13!625;UBERON:0000477!9.17e-13!286;UBERON:0000033!8.50e-12!123;UBERON:0000922!1.61e-11!612;UBERON:0000153!2.44e-11!129;UBERON:0007811!2.44e-11!129;UBERON:0002050!4.13e-11!605;UBERON:0005423!4.13e-11!605;UBERON:0000923!4.53e-11!604;UBERON:0005291!4.53e-11!604;UBERON:0006598!4.53e-11!604;UBERON:0002532!4.53e-11!604;UBERON:0000475!7.51e-09!365;UBERON:0003075!7.99e-09!86;UBERON:0007284!7.99e-09!86;UBERON:0000025!1.60e-08!194;UBERON:0000483!1.64e-08!309;UBERON:0000119!3.39e-08!312;UBERON:0000062!1.07e-07!511;UBERON:0004121!1.30e-07!169;UBERON:0002346!2.38e-07!90;UBERON:0002616!2.67e-07!59;UBERON:0001009!3.31e-07!113;UBERON:0004535!6.52e-07!110 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.38e-14,114;UBERON:0004111,3.53e-14,240;UBERON:0000922,1.06e-10,592;UBERON:0005423,2.41e-10,581;UBERON:0002050,6.73e-09,564;UBERON:0000025,2.00e-08,192;UBERON:0003075,2.05e-08,82;UBERON:0007284,2.05e-08,82;UBERON:0000483,2.61e-08,306;UBERON:0000923,2.88e-08,560;UBERON:0010316,2.88e-08,560;UBERON:0005291,2.88e-08,560;UBERON:0006598,2.88e-08,560;UBERON:0010317,2.88e-08,560;UBERON:0002532,2.88e-08,560;UBERON:0000119,5.35e-08,309;UBERON:0010371,9.24e-08,104;UBERON:0001009,4.35e-07,112;UBERON:0002346,5.89e-07,86;UBERON:0000955,6.42e-07,68;UBERON:0006238,6.42e-07,68;UBERON:0004535,8.53e-07,109;UBERON:0004121,9.93e-07,171;UBERON:0000924,9.93e-07,171;UBERON:0006601,9.93e-07,171 | |||
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|short_description=p1@UBE2H | |short_description=p1@UBE2H | ||
}} | }} |
Latest revision as of 06:05, 16 September 2015
Short description: | p1@UBE2H |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_UBE2H_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000355621, ENST00000472396, NM_001202498, NM_003344, NM_182697, uc003vpf.1, uc003vpg.1_5end |
EntrezGene: | UBE2H |
HGNC: | 12484 |
UniProt: | P62256C9JZY6A4D1L5A4D1L6Q7Z6F4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 2.38e-14 | 114 |
anatomical conduit | 3.53e-14 | 240 |
embryo | 1.06e-10 | 592 |
developing anatomical structure | 2.41e-10 | 581 |
embryonic structure | 6.73e-09 | 564 |
tube | 2.00e-08 | 192 |
neural plate | 2.05e-08 | 82 |
presumptive neural plate | 2.05e-08 | 82 |
epithelium | 2.61e-08 | 306 |
germ layer | 2.88e-08 | 560 |
germ layer / neural crest | 2.88e-08 | 560 |
embryonic tissue | 2.88e-08 | 560 |
presumptive structure | 2.88e-08 | 560 |
germ layer / neural crest derived structure | 2.88e-08 | 560 |
epiblast (generic) | 2.88e-08 | 560 |
cell layer | 5.35e-08 | 309 |
ecto-epithelium | 9.24e-08 | 104 |
circulatory system | 4.35e-07 | 112 |
neurectoderm | 5.89e-07 | 86 |
brain | 6.42e-07 | 68 |
future brain | 6.42e-07 | 68 |
cardiovascular system | 8.53e-07 | 109 |
ectoderm-derived structure | 9.93e-07 | 171 |
ectoderm | 9.93e-07 | 171 |
presumptive ectoderm | 9.93e-07 | 171 |