FFCP PHASE1:Hg19::chr17:5403539..5403572,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=728392 | |EntrezGene=728392 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt=Q96AM0 | |UniProt=Q96AM0 | ||
|association_with_transcript=204bp_to_BC016965_5end | |||
|cluster_id=chr17:5403539..5403572,- | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_2_at_LOC728392_5end | |||
|id=chr17:5403539..5403572,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000540;8.47e-23;6!CL:0000404;8.47e-23;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,8.47e-23,6;CL:0000031,8.47e-23,6;CL:0000404,8.47e-23,6;CL:0000047,2.19e-17,8 | |||
|ontology_enrichment_development_v019=UBERON:0005425;7.06e-34;1!CL:0000031;8.47e-23;6!UBERON:0009117;2.49e-14;10!UBERON:0005564;2.49e-14;10!UBERON:0003056;2.89e-12;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!9.92e-37!57;UBERON:0005068!9.92e-37!57;UBERON:0006241!9.92e-37!57;UBERON:0007135!9.92e-37!57;UBERON:0001017!1.12e-34!82;UBERON:0005743!1.28e-32!86;UBERON:0002616!1.48e-32!59;UBERON:0000073!1.29e-30!94;UBERON:0001016!1.29e-30!94;UBERON:0000955!1.64e-30!69;UBERON:0006238!1.64e-30!69;UBERON:0003075!1.71e-28!86;UBERON:0007284!1.71e-28!86;UBERON:0002346!8.30e-27!90;UBERON:0002780!1.55e-26!41;UBERON:0001890!1.55e-26!41;UBERON:0006240!1.55e-26!41;UBERON:0003080!9.07e-26!42;UBERON:0002619!2.09e-25!22;UBERON:0001950!8.43e-25!20;UBERON:0001893!2.13e-24!34;UBERON:0002020!2.16e-24!34;UBERON:0003528!2.16e-24!34;UBERON:0007023!4.05e-24!115;UBERON:0001869!1.57e-23!32;UBERON:0002791!1.06e-22!33;UBERON:0000956!5.57e-22!25;UBERON:0000203!5.57e-22!25;UBERON:0003056!3.81e-19!61;UBERON:0000033!4.12e-18!123;UBERON:0004121!9.02e-18!169;UBERON:0000924!4.14e-17!173;UBERON:0006601!4.14e-17!173;UBERON:0000153!7.71e-17!129;UBERON:0007811!7.71e-17!129;UBERON:0004732!3.93e-14!13;UBERON:0003076!5.46e-12!15;UBERON:0003057!5.46e-12!15;UBERON:0004733!6.71e-12!12;UBERON:0002028!6.71e-12!12;UBERON:0007277!6.71e-12!12;UBERON:0001871!1.93e-11!7;UBERON:0000025!1.95e-11!194;UBERON:0000200!5.66e-11!6;UBERON:0002298!2.12e-10!8;UBERON:0004111!3.26e-09!241;UBERON:0002771!5.62e-09!3;UBERON:0001872!1.35e-08!5;UBERON:0001896!4.85e-08!3;UBERON:0005290!4.85e-08!3;UBERON:0010096!4.85e-08!3;UBERON:0000477!7.27e-08!286;UBERON:0000483!1.21e-07!309;UBERON:0000119!1.82e-07!312 | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;7.06e-34;1!UBERON:0001785;7.06e-34;1!UBERON:0002464;7.06e-34;1!UBERON:0004904;7.06e-34;1!UBERON:0001021;7.06e-34;1!UBERON:0003714;1.07e-17;2!UBERON:0005162;1.07e-17;2!UBERON:0000122;1.07e-17;2!UBERON:0000473;1.22e-17;8!UBERON:0003135;4.00e-13;11!UBERON:0000991;2.44e-07;21!UBERON:0003101;4.79e-07;22!UBERON:0000079;4.79e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,7.06e-34,1;UBERON:0001785,7.06e-34,1;UBERON:0002464,7.06e-34,1;UBERON:0004904,7.06e-34,1;UBERON:0001021,7.06e-34,1;UBERON:0003902,7.06e-34,1;UBERON:0005425,7.06e-34,1;UBERON:0003714,1.07e-17,2;UBERON:0005162,1.07e-17,2;UBERON:0000122,1.07e-17,2;UBERON:0000473,1.22e-17,8;UBERON:0003135,4.00e-13,11;UBERON:0001781,1.57e-09,4;UBERON:0000991,2.44e-07,21;UBERON:0009196,2.44e-07,21;UBERON:0009117,2.44e-07,21;UBERON:0005564,2.44e-07,21;UBERON:0004176,4.79e-07,22;UBERON:0003101,4.79e-07,22;UBERON:0000079,4.79e-07,22;UBERON:0000966,8.97e-07,6;UBERON:0005388,8.97e-07,6;UBERON:0001802,8.97e-07,6 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0,0,0,0,0,0,0,0,0,0,0.535081656179426,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,0.0945348171640679,0,0,10.2818574265704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0.264818361626438,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.54657762555539,0.167516265334349,1.27587750330633,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0,0,0.160853921143607,0,0,0,0,0,0,0,0.200506470303285,0,0,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0.202910376962704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.764637207142375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0.613612095012929,0,0,0,0,0,0,0,0,0,0.278304294485554,0,0,0,0,0,0,0,0.344743373241465,0,0,0,0.120596438625408,0,0.221158519862449,0,0.438770794307945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234264445725339,0,0,0,0,0,0.61214552326098,0,0,0,0,0,0,0,0,0,0,0,0,0.698906672968121,0,0,0,0,0,0,0.225980740780532,0,0,0.253243183823515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.364497339948148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.366078794705889,0.3755727921195,0.573409195690071,0.110929051536852,0.0620964029413835,0,0,0,0,0,0.468334905806882,0,0,0,0,0,0,0,0,0,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0,0.214821114084977,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6124909547064,0.192687675289379,0,0.319267718114302,0.82046545696302,0,0.0691572524642179,0.484426936895553,1.42769420259154,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135075169236789,0,0.206686796501184,0.126831620387814,0.546974809018219,0,0,0,0,0,0,0.606965604236632,0,0,0,0.171488009437418,0.0679697329768317,0.197318320688547,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0.801711364730253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118920090777569,0,0,0,0.0771741581079447,0,0,0,0,0.785233868459781,0,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,14.549510057902,25.9925206251493,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p2@LOC728392 | |||
}} | }} |
Latest revision as of 07:36, 16 September 2015
Short description: | p2@LOC728392 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_LOC728392_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 204bp_to_BC016965_5end |
EntrezGene: | LOC728392 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 8.47e-23 | 6 |
neuroblast | 8.47e-23 | 6 |
electrically signaling cell | 8.47e-23 | 6 |
neuronal stem cell | 2.19e-17 | 8 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 7.06e-34 | 1 |
cranial nerve | 7.06e-34 | 1 |
nerve trunk | 7.06e-34 | 1 |
nerve connecting eye with brain | 7.06e-34 | 1 |
nerve | 7.06e-34 | 1 |
retinal neural layer | 7.06e-34 | 1 |
presumptive neural retina | 7.06e-34 | 1 |
neural tissue | 1.07e-17 | 2 |
multi cell component structure | 1.07e-17 | 2 |
neuron projection bundle | 1.07e-17 | 2 |
testis | 1.22e-17 | 8 |
male reproductive organ | 4.00e-13 | 11 |
layer of retina | 1.57e-09 | 4 |
gonad | 2.44e-07 | 21 |
indifferent external genitalia | 2.44e-07 | 21 |
indifferent gonad | 2.44e-07 | 21 |
gonad primordium | 2.44e-07 | 21 |
external genitalia | 4.79e-07 | 22 |
male organism | 4.79e-07 | 22 |
male reproductive system | 4.79e-07 | 22 |
retina | 8.97e-07 | 6 |
photoreceptor array | 8.97e-07 | 6 |
posterior segment of eyeball | 8.97e-07 | 6 |